Sinocyclocheilus grahami (golden-line barbel): 107562698
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Entry
107562698 CDS
T04918
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
sgh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107562698
04148 Efferocytosis
107562698
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107562698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107562698
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107562698
Hops complex
107562698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_16
zf_RING_Vps8
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
DUF5600
zf-rbx1
DUF2229
zf-C3H2C3
KNOX2
Apolipoprotein
zf-RING_5
DUF2175
zf-RING_UBOX
DUF1664
DUF4446
Motif
Other DBs
NCBI-GeneID:
107562698
NCBI-ProteinID:
XP_016102871
UniProt:
A0A672Q9M6
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINHL
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDGKVHKLFLDPTGSHLVISLTTNE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKLIGSETNTGPILVGTIQGIIFEAEISASEGS
LFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLESKYFIVATTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRCSPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNSVKPFSIVLTQFHFLLLLPDRVKSICTLNGQVVHEENFF
PEKFGSLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRP
ECLDMVLAKEAEHCFQNKRFLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLIKKLTN
LKATEKTQITLLVTWLTELYLNRLGQLEADDGKQHLFLETREEFRTFLKSPKHKDCFFNN
RNTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFS
PVLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVK
DEAIHNYLLSLYAKHKPDALLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKI
MELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSS
CNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNQHIEELKQEMEEATQSAKRIREDIQE
MRNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLLQEVISHLSAFKQNKLEELQ
KKLAATTQTTKSRHRPKEEDTVSLGKGQGSREQIKSDIDDIIACECVYCGELMIKSIDKP
FIDPQKFDQEMSSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggatcaatatgaagattctcagaacatccgtcaacacagccgtgtg
tcagcggccaacatcgggattactcattcagggtttgtgaatgtaaggttggaggaagag
aaacccattttcaacaagcagcgcatcgatttctcacctcccgaaaaaatcaaccactta
tcagtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgac
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgatggcaaagtg
cacaaactttttctagatcctacagggtcacatttagtcatcagcctcaccacaaatgaa
tgtgtgtacctaaaccgaaacactcaaaaggtccgaagtctgtcacgatggagaggtcac
ttgattgaaagcataggatggaataaattaatcggctctgagaccaacactgggccgatt
ctggtcggtaccatccagggaatcatctttgaagcagagatctctgcctcagagggctct
ttgttcaacactaacccagaccagtacttcagacaggttcattccctggaggaggatggt
aagccagctccggtttgttgcctcgaggtagaacgtggcttggaatccaagtacttcatt
gttgcgacaacacggaaacgcctgttccagtttgtaggaaagctggcagagggatccgag
cagcaggggttcagctccatctttgcccagaaccaggatctcctacccagcttccaggag
tttccagtcaacatgggctacagtgagattacgttctacacgtccaagttgcgctgttcc
ccgaagacctttgcatggatgatgggtaatggggttttgtatggacagctagactatgtg
cgtcccgactctctactcagtgatgttcaagtgtgggaatacacctcagacatcgattta
aactccgtcaagcccttctctatagtcctcacccagtttcacttcctgctcctgctccca
gaccgcgtcaagagtatttgcactctgaacggacaggtagtgcacgaagaaaactttttt
ccggaaaagttcggcagtctgaaaaagatgatcaaagatccaatcactgggctcgtgtgg
atctacaccgagaaagctgtgtttcgctaccacatccagagagaggcacgggacgtttgg
cagatgtacatgaacatgaataagtttgaccttgctaaagagtactgcaaagacagacca
gaatgcctagacatggtgctggccaaagaggcggagcactgcttccaaaacaagcgcttc
ctggagagtgccaaatgctacgctctcactcagaattactttgaggagattgcgctgaag
ttcatcgaggccaagcaggaggaggccttgaaagagtttctgattaagaagctgaccaac
ctcaaggccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctat
ctgaaccggctcggtcaactggaggccgatgacggcaagcaacacctctttctggagacc
cgagaagagttccgcacctttcttaaaagccccaaacataaagactgcttcttcaacaat
cgcaacacaatctacgacctgctcgctagtcacggcgacgtggacaacatggtgtatttc
tcagtcatcatgcaagattacgagcgtgtcatatctcattactgccagcatgatgactac
agtgcagccttagatgttctctccaaacactgtgatgacaagctcttctacaagttctcc
ccggtcctcatgcagcacatccccaaaaaggtggtcgatgcatggattcaaatgggaaac
cggttggatccgaagaatctgatcccagcgctggtgaactacagccagatgggcagcatg
cagcagataaacgagaccatccggtacatggagttctgtgtgtatgagctggatgtcaaa
gacgaagccattcacaattatttactgtcactttatgccaaacacaagccagacgctctg
ttgtggtacctcgaacaagcaggaacgcacgtctctgacatccactatgacttgaaatat
gccttgcgcctttgtgccgaacatgggtacctgcaggcctgcgtcttggtttataagatt
atggagctgtatgaggaagctgtggatctagctctacaagtggatgtagatttggccaag
tcttgcgccgaccttccagaggatgacgaggagttgaggaagaagctgtggctgaagatt
gctcgtcatgtggttcaggaggagaaagatgtgaagaaggccatgaactgtctgtccagt
tgcaaccttcttaagattgaggacatcttgcctttctttccagattttgttacgatagac
cacttcaaggaggcaatttgcaactccctggaagagtacaatcaacacatcgaggagctg
aagcaagaaatggaggaggccacacaaagtgccaaacgcatccgtgaagacatccaggag
atgaggaacaagtacggagtggtggagtctcaggaaaaatgtgccacttgcgatttcccc
ttgctcaacagacctttctatctcttcctgtgtggtcacatgttccattatgattgcctc
ttacaggaagtcatctctcacctctctgcctttaagcagaataaattagaggagcttcag
aagaagctggcagcgaccactcagaccaccaaatccaggcacaggcccaaagaggaggat
acggtcagcttaggcaagggccaaggaagcagagagcagatcaagtctgacattgatgat
atcatagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcct
ttcatagatccacagaagtttgatcaagagatgtccagctggctctga
DBGET
integrated database retrieval system
