Sinocyclocheilus grahami (golden-line barbel): 107562787
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Entry
107562787 CDS
T04918
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107562787
04091 Lectins [BR:
sgh04091
]
107562787
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107562787
Lectins [BR:
sgh04091
]
C-Type lectins
Others
107562787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
REJ
Motif
Other DBs
NCBI-GeneID:
107562787
NCBI-ProteinID:
XP_016102995
LinkDB
All DBs
Position
Unknown
AA seq
2255 aa
AA seq
DB search
MTKKDYPYFLSKAIESEVVPKAPVLSKSPEEQPLPAGSPEAAPVITKAPEAVPVPAESPE
AAPVHTGFQSQLLHTPGPNRQRQYQSSPQKLCICLPESALVHASNPEAAPVPTKSPEAVP
ILARSPKLLYLPNPQKQNLCPMGAQRQLLHLLSHQRQHLCTPGPLMQWVSLQHCRPLNNG
GRQWWRQWKFQATQEANLRNPMQLEQQNPQAHIPQGTLMPTRNPKGMPVSAYSLKVACVL
TKTIQGAPVPTRTPHRGKQRIPEHLRQHAHQDPKREKLTVPKVLRQHLRQQKPQTSFTKD
ASVPARSPNEAAMPAKTTQGAPMPLSTPKRTNVTYKIQHENTELASISAIRGIVPHNITI
SPEVQQQLGPGCQQFTVVALNGVTAVDRSAVLELCLVEPVEGLIADMEFEHEQCPVHALY
VNVSLARGAPVQLHFLVSGANHTFSEMHEMLHGSPQISEQVRTARANNLNVTVDPEVPVI
GTTSIKLYVEGLVDDNAIWKCHEDCPCPSEVKHRDYEISEACLPPVYSFSVYTVHTKSHG
VTQSGTRCITVIPRENMKLSVTCSNCSPVNVAESVKLQVQCEGCQKIVWYFESTKDFTGS
LSRCHSESVKKPLIQKAEGSWFTIESDALRRAKQDITVVVYGNYFYCGAEPTVESLYLPL
GDKHNNYSLMVDITVKNAAGVTADTAVTTRVKDTSRNHTVGDLQALVSNQVSQLQQQGRL
TGAALAQMFQSVSDRLNAALPEGQHDSVKKELREEMLQSLSAATSSFPPKNPAEVQMSAN
VVSGLTTQGHELTDTAQLQASYLLTNLSKSLVSLTLSGKEFSEKILQASTPIIDAASNII
KVSSSTSKQNEISSHLLNTVDNVQSALLAGKKVNQEPIILSSSVFGLYVNRISSDDLQKQ
PFNIQKNSSASFILPSLGSNVLSPDEPVDVRMTSFRINPFSRHEGEHISGSVGSLSLTKM
NGSVITVANLTEEIEILLPRTEVAEVNQTLLELANFSTVIINVTAPNISLVFKLDPSEET
PLQLLLGFQDYPNDTNYEARIQLPQDGDSEEERYTWVLNPTEMTIEVGVYYLLVRPVVGA
GVNSTNTSVFITTIAAHCLFWDETKANWSGDGCRVGPRTTTLVTQCLCTHLTFFGSSFFV
MPNVVDVSRTAELFATFVNNPVVVCFVGAIILAYLLVVMWARRKDIQDAVKVKVTVLEDN
DPLAEYRYLLSINTGHRRGASTSSQVTVTLQGTEGEIEPHHLTDPEKPVFERGGLDMFLL
TTPFSLGELQSIRLWHDNSGQHPSWYVNKVMVQDLETGQKWHFLCNSWLSVDLGERTLDK
VFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPSSNFTRVQRVSCCFSLLLCTM
LTSIMFWGIPSDPSEQTMDLGQIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNARPREQK
SESSSKQQSKIDPKKPVKMGRVSPNQPPHNNHKEITPDTVIKDIKRIAQSLYKVMRRPVP
RTELDSTKTDINNLLSLVEEIIRQHNRVGKRNEKHSVYSQYLYKQLQNVERELRLVGPSS
FSKPNSYNQAVLQVQGMKNLLEPHVSSCSVSGLHTRSSSPTEGNSGDSRKCSQKGLPWWF
VFVGWFLVVSTSGVSAYFTMMYGLTYGKERSISWLISMVVSFFESLFITQPVKVLGFAVF
FALVLKTVDQEDYGDVPIDGTLLSTDDPDAIRIARRDSTCSFYQPPPPTDIEKMRNNMIK
EQKVFALIREILIYVGFLWMLLLVAYGQRDPHAYYLTQHIRQSFSNGISESMNHKDILNW
AKSSLLSNLFGQYPGFITDGNSKLVGNARFRQVRVRKDSCKIAKTMQYSVPDCHAPYSWE
AEDMGSYGPGWNRTKNVNGSKIVPTPWHYQTQAKLRANPVWGGLALYKGGGFVVELGPDQ
KNASSLLQYLFDNIWLDVYTRAVFVEFTVYNANVNLFCIVTLIFETTGVGAFQYRSEVQT
VHLYQSTGGFHVFVMASEAIYFLFILYYMFVQGKLMKQQKWAYFRSKWNLLELAIIILSW
SALSVFVKRTILGNRDIEYYQNNKDMFASFYETATADAVLGYLTAFLVLLATIKLWHLLR
LNPKLHMITSTLQRAWTDISGFIVVMTIMFLAYSIACNLMYGWRLYSYRTLLDAAQTIIC
LQLGIFNYDEVLDYNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFNEEQLHPTPSEEEE
IVDLMLMKICSLLGIKCKKKQIGADASLTTASVIS
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaagactacccatacttccttagtaaggccattgagtctgaagtggtcccc
aaagctcctgtactttccaaatccccagaggaacaacctttgcctgccgggtccccagag
gcagctcctgtaattactaaggccccagaggcagtgcctgtacctgctgagtcaccagag
gcagcacctgtgcacaccggtttccagagtcagctcctgcacacgccaggacccaatagg
cagcgccagtaccaatcaagtccccagaagctgtgcatatgcctgccagagtcagctctt
gtgcatgccagtaacccagaggcagctccggtacctaccaagtccccagaagctgtgcct
atactggccaggtccccaaagctcctgtacttgccaaatccccagaagcagaacctgtgc
ccaatgggtgcccagaggcagctcctgcacctgctgagtcaccagaggcagcacctgtgc
acaccaggtcccctgatgcagtgggtgagcctgcaacactgcagaccactcaacaatggt
ggaaggcagtggtggaggcagtggaaatttcaggccacacaggaagcaaatctgcggaac
cccatgcaactagagcagcaaaatcctcaagcccacataccacaaggaacactcatgccc
accaggaacccaaagggaatgcctgtgtctgcatattctttaaaagtagcatgcgtgctc
accaagactatacagggagcacctgtgccaaccaggacccctcacagaggaaaacagagg
atccctgagcatttgaggcagcatgcccatcaggatcccaaaagagagaaactgacagtc
cctaaggttctgaggcagcatctgaggcaacagaagcctcagacctcttttacaaaggat
gcatctgtgcccgccaggtctccaaatgaagcagccatgccagctaagacaacacaggga
gcacccatgccccttagtaccccaaagagaacaaatgtaacatacaaaattcagcatgaa
aatacagagctggcctccatttccgctatcagagggatcgttccccataacatcaccata
tctccagaagtacagcagcagctaggaccaggctgccaacagtttactgttgtggctctc
aatggggtgacggctgtagatcgctccgctgtcctggagctgtgcttggtggagccagtg
gaaggactcatagcggacatggaatttgagcatgagcagtgtccggtccatgccctctat
gtcaatgtgtctctggctcggggggctccagtgcaactgcattttctggtgtctggagcc
aatcacaccttttctgagatgcatgagatgctgcacggaagtccacaaatcagtgaacaa
gtgagaactgccagagccaataatctaaatgtcacagtagatccagaggtcccagtcatc
ggcactaccagcatcaagctgtatgttgagggattagtagatgacaacgctatctggaaa
tgccatgaggattgcccctgtcccagtgaagtgaaacatagagattatgagatatccgaa
gcttgcctaccaccagtgtacagtttctctgtgtatactgtacataccaagtcacatggt
gtcacacagtctggaaccagatgcatcactgtcattcctagagaaaatatgaagctttct
gttacctgttccaactgcagtccagtgaacgtcgctgagagtgttaagctacaggtgcag
tgtgaaggatgtcagaaaattgtttggtactttgagagcacaaaggattttactggttca
ctaagccgctgtcactcagagtcagtgaaaaagccattgatacagaaggcagagggcagc
tggtttacaatagagagtgatgcactacgaagagcaaagcaggatatcacagtggtggtt
tatggtaattatttttattgtggtgccgagcccacagtggagtcgctttaccttcctctt
ggggataaacataacaactacagtctgatggtggacatcactgttaagaatgcagcaggt
gttactgctgacactgctgtaaccactcgggtaaaggacaccagtaggaatcacacagtt
ggagatctccaggcgctggtttccaaccaggtgtctcagctgcagcaacaaggtcgactc
actggggcagcactggcacagatgttccaatctgtgtccgacagactgaatgctgcatta
ccagaaggacagcatgacagtgtcaaaaaagagctgagggaagagatgttgcagagtttg
agtgctgccacgagttccttccccccaaagaatccagcagaggtgcagatgagtgctaat
gtggtttcaggccttaccacacagggtcatgagctgacagacactgctcagttacaggct
agttatctgctaacaaacctcagtaagtccttggtctccttgacgctttctggcaaggag
ttctctgaaaagatactgcaagcatccacgccgattattgatgctgccagtaacatcatc
aaagtttcttccagtacttctaagcagaatgagatctccagtcatttactaaacactgtg
gacaatgttcagagtgccttgttggctgggaaaaaggtgaaccaggagcccatcatactc
agctcttcagtttttggtttatatgtcaacagaatatcatcggatgatcttcagaaacag
ccctttaacattcagaagaacagctctgccagttttatcctcccatctctgggctctaat
gttctgtctccagatgaaccagtagatgtacggatgacaagtttcaggataaatccattt
tcacggcatgagggcgagcatattagtggatcagtggggtctctatctctcaccaaaatg
aatggctctgtgattacagtggcaaacctcactgaggagattgagattctcttaccaagg
acggaggtggcagaggttaaccaaactcttctggaactggcaaacttcagcactgtcatc
atcaatgtgactgcacccaatatatctctggttttcaagttagacccttcagaggagaca
cctctgcagttgctcctgggttttcaggactaccctaacgatacaaattatgaagctcgg
atccagctacctcaagatggcgactctgaagaggagaggtacacttgggtgcttaaccct
acggaaatgacaatagaagtaggcgtttactaccttctggtgaggcctgttgttggagca
ggggtgaattcgacaaacacctcagttttcatcacaaccattgctgctcactgtttgttt
tgggatgagacaaaggccaattggagtggagatggctgtagggttggccctcgaactaca
acattggttactcaatgcctatgtacccatttgaccttttttggaagttctttcttcgtc
atgcccaacgttgttgatgtgtcccgcactgctgaactctttgcaaccttcgtcaacaac
ccagtggtggtgtgttttgtaggcgccatcatcctggcttacctgttggttgtgatgtgg
gcacgaagaaaggatattcaggatgcagtgaaggtgaaggtcacagtacttgaggacaat
gatcccttagctgaatatcgttacttgttgagtatcaatacagggcatcgtcgtggggcc
tccacctcttctcaggtgacagtgactctacagggcacagaaggagagattgaacctcat
catttgactgaccctgaaaaaccagtgtttgaaaggggaggactggacatgttcttgctg
accacccccttctcactgggagagctacaaagtattaggctgtggcatgacaattcagga
cagcatccttcttggtatgttaacaaggtaatggtacaagacctggagactgggcagaag
tggcacttcctgtgcaactcatggttgtccgttgacttgggagaacgtacactagataaa
gttttccctgtagcaacagagatggacttgaaaaggtttagtaatttgttcttcatgaag
actgcaaaagatttccgtgatggtcacatctggttctctgtaatcagtcgtcccccaagt
agcaattttactcgagtacagcgtgtctcctgctgtttttcgctgctgctctgcaccatg
ttgaccagtatcatgttctggggtatcccatcagacccctcagagcagaccatggacctg
ggtcagattgagttcacctggcaacaggtcatgattggcatccagagttccattattatg
tttcctatcaatctcctcattgtgagcatcttcagaaatgctcgtccaagagaacaaaag
tctgaatcatcttcaaagcaacagtcaaagatagatcccaaaaagccagtcaaaatgggg
cgtgtatctccgaatcagcctccacacaataatcacaaggaaatcacacctgacactgtg
ataaaggacatcaaacggatagcacagtcactctataaggtcatgagaagacctgttcca
aggacagaactggactccaccaaaacagatatcaacaatctgctgtcactggttgaagag
ataattcgtcaacacaatcgagttggaaagcgaaatgaaaaacacagtgtctacagccag
tatctctacaaacaactgcaaaatgtggagagagagctgagactggtggggccttcatcc
ttctctaagccaaacagctacaaccaggctgtattgcaggtccaaggcatgaagaaccta
cttgaacctcatgtctcctcctgttctgtcagtggtctacatacccgtagctccagccct
acagagggcaacagtggagacagcagaaagtgtagtcagaaaggcttgccctggtggttt
gtgttcgttggttggtttcttgttgtatccaccagtggtgtttcagcatacttcactatg
atgtatgggttgacctatgggaaggagcgttccatcagctggctcatctcaatggtggtg
tccttcttcgaaagcctcttcatcacccagcctgtaaaagtactgggctttgcagtcttc
tttgctttggtactcaaaacagttgatcaagaagattatggagatgttccgattgatggg
actctactcagcacggatgatcccgatgcaatcagaattgccagaagagacagcacatgt
agtttctatcagcctcctcctcccactgacatagaaaagatgagaaacaacatgatcaag
gagcagaaagtgtttgcactcatccgggagattctcatttatgtgggattcctttggatg
cttctcttggttgcatatggtcagcgagatccacatgcatactacctcactcagcatatc
cggcagagtttcagcaatggcatttcagagagtatgaaccacaaagatatattaaattgg
gcaaaatcctccttgctcagtaatctgtttgggcaatatccaggcttcataacagatgga
aattcaaaacttgttggcaacgctcgattccgccaggttagggtaaggaaagactcttgt
aaaattgccaagaccatgcagtactctgttcctgactgccatgccccatactcctgggaa
gcagaggacatgggctcttacggtccagggtggaaccggactaaaaatgtgaatggttct
aagattgtacccacaccttggcactaccaaactcaggccaaactccgggcaaaccctgtt
tggggtgggctggccctttataagggtggaggatttgtggtggaactaggcccggatcaa
aagaatgcaagcagtcttcttcagtatctttttgacaacatctggctggacgtgtataca
cgggctgtctttgtggagtttacagtttataatgcaaatgtgaacctcttctgcattgtg
actctcatttttgagaccacgggagtgggtgcattccaatatcgtagtgaggtgcagact
gtccatctttatcagtccactggtggctttcacgtatttgttatggcatcagaggccatc
tatttcctcttcattctctactacatgtttgtgcagggcaaactgatgaagcagcagaaa
tgggcatatttcagaagcaaatggaatctcttagagttggctattatcattctaagttgg
agcgcattatctgtgtttgtcaagaggacaatattgggtaaccgggacattgagtactac
caaaacaacaaagacatgtttgccagtttttatgagactgccactgcagatgctgtacta
ggctatctgacagctttcttagtactgctggccaccataaagctgtggcatctgctgaga
ctcaaccccaagctacacatgatcacctctacactgcagcgggcatggacagatatctct
ggcttcattgtggtcatgaccatcatgtttctggcctattccattgcttgcaatttgatg
tacggttggaggctctactcatacagaactctgcttgatgctgcacagaccattatttgt
ctacaactgggtatctttaactatgatgaggttttggattacaatccagtcctgggagct
ttcctgattggatcctgcattatctttatgacattcgtagttctcaacctctttatatct
gtgattttggtggctttcaatgaagagcaacttcatcccactccttctgaagaagaggag
attgtagacctgatgctgatgaagatctgcagtcttcttggcatcaagtgcaagaaaaag
caaattggtgcagatgcttctttgactacagcttcagtcatatcatag
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integrated database retrieval system
