Sinocyclocheilus grahami (golden-line barbel): 107562809
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Entry
107562809 CDS
T04918
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03440
Homologous recombination
sgh04068
FoxO signaling pathway
sgh04110
Cell cycle
sgh04115
p53 signaling pathway
sgh04210
Apoptosis
sgh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107562809 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
107562809 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107562809 (atm)
04210 Apoptosis
107562809 (atm)
04115 p53 signaling pathway
107562809 (atm)
04218 Cellular senescence
107562809 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sgh01001
]
107562809 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgh03032
]
107562809 (atm)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107562809 (atm)
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107562809 (atm)
Enzymes [BR:
sgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107562809 (atm)
Protein kinases [BR:
sgh01001
]
Serine/threonine kinases: Other
PIKK family [OT]
107562809 (atm)
DNA replication proteins [BR:
sgh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107562809 (atm)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
107562809 (atm)
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
Check point factors
Other check point factors
107562809 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
CEP104-like_TOG
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
107562809
NCBI-ProteinID:
XP_016103019
LinkDB
All DBs
Position
Unknown
AA seq
2792 aa
AA seq
DB search
MSLALHELLVCCRGLENEKATERKKEVDRFRRLIRSPDTVEELDRTSGCKGSKQLTWDAV
FRFLQKFLQKETELLQSGKANVSATTHANRQKKMQEISSLMKYFIRCANQRGPKLKCAEL
ISHVVEVLQSPFSCAAYGEDYSSILLKNILSVRKYWCEMSQQQWHSLLDLYCGLFNKGSK
SGTNRVQVSRIVYTVVWGCCVQTEGLSHTLFNFFLKALKRPDGQLMILENLVSAVNVFLH
SVLLSNRKRVCGLGEEVLSSMLRVYTEMRPSLVLKEELVKFFHLQLCVHHPRGAKTLETG
AYAEDWVRWQGQLCTLYDALVSEISQIGSRGKYATGSRHIAVKESLIELTADVCHQLFNQ
STPVSEATTSFCRDTQRDSPQCCKRRRIEPSLINWEVIRSKLQPHHSDFDMIPWLQVTAA
LISRYPSIRCADDLVPLLGLLCQLQGEQQRRGERGPYVLRCLREVALCHAKSSANCSAHA
AEAGRLWGRVWALALRGVGSVQTGSLCLELLRIMVQESLVPVDREFWKVFSGAVCKPSLV
GALCLAQALLKCSIPKSVHNQDVTSGGLMETGGEPPTLTDSIISWLVMNEQNEETEENSR
PHLIITRDFPLNLIPRILVSLTLKDSRAGLMFLMGSLKPESHALVHEFSHYISMAKSKLS
ENDTIKAIQSVMLLCSDSISRREKEDGISTTSRNLFMKTLPVRLLNDMCDISKQLLSNSS
KKDNTVMENDPMDEDMDMSRTQMDGREEIDLFEDGDGAHHSTFRPHQSNEEAADSKYTTG
TKSALSEEHLSRQDLAFLSVLGFLSLCASSELNGGFSFKPLDTQRKLLKLLDLIDFSQML
HLHMYLSLLKKLPAEITSLDPEEFDTLLRPLADICSLYRQDQEVCAAILCSLLPSIRCLG
RTPSVSEQEDEMSHIKGALLKVISGFCILGKSGKCTSAVRVALRQCLLALLEVDPCCKWA
ELTLREAELPVSVVLSSHLADAHHHVCMLAALSVESLFLKKGPDGSGKRMLPLKNQQMAF
ENIYLKAQEGMRGQKNCPSEDLPDETFNRRAVLLKSVSMVMSCSPVCEKQALFALVQSYK
ENSIDEQLIKKQIDGLICNNLADIVVELLMTLHETEGAAAGGGDLQKFTGELDPAPNPPF
FSSYVIKATLDYLSKCHSANHKSLVAILSKTPMSIQKILIAICQKAAETTNGYERHRILM
MYHLFVSLLLREVKDGLGGAWAFVLRDIIYTLIHHINSRSCQQDEVSTRSLSLCCDLLSL
VCQTAVQYCDDALESHLQVIVGTLTAQVTDQSAISQQVLSLLRFLVIENPENSMLRNSIP
LLEPFPDRARFRDLRAAQHALKYSSGAFTLRQEIEHFLSVTSCDSLPLARLEGLKDLKRQ
LHSHKQQIGQLLKECHADPASCILVKLVLNLLQLCKIAANHPGGGDILKAAGRCLGELGP
VDLSSIALHHGKDQLYARAADLFPDVPFQWIFIILNCMDNALTHHSIAVRQAAGICLKDI
LATQCGIEFGEMYKSKRDPLLAYLNPFRSAKKRETIVSMEVTSESRHRLDNAELWLVQPG
GHKDWLKNLCMALLDSGGVRNEALLLTRPLCEVKTEFCQRMLPLFVHDILLGDVDGSWRQ
LLSTNIQSFFNQCRRPSTPTSRPTTPMLSDSGNSIDVGNQSQIDKTSLRSMMAVIDYLRQ
QSRPVAPGSHEYGTVCDSNFWLDLNYLEVAGAAQMCSAHFTALLYSEIYVDKIRSDMEQI
QRPQSRVSRRITFEESSQTLSISSVNEKSLEDSGISLQDLLIEVYRCIGEPDSLYGCGGG
KLISPLTRIRTYEHEAMWDKALVSYDLHSNLPEVTRQTGIVEGLQNFGLCSILNTYLHGL
EKEGVEWGPELRELRFQAAWRNTQWDCDLPERNEKLKPGINESLFNAVQALRDREFSLFE
QTLNYARGHEVEELCRGSLEAVSSLYPALCNLQRIRELQSVEELFSRPVTDSSLNEVYRK
WQQHSDLLTDSDFSLVEPVLALRSSIQETLISSETDPDRKNYLISSYSSHLMELCKLARS
AGHTQLAERAVFHMKRHSLVAGGGGGSSSWAWQLEEAQVFWVKKEHGLALGLLKQMIHKL
EDLVCVNPAVVPVYSECLRLCGSWLAESCLESPAVILEKYLERAVEVIEDHCGDSNAKLQ
SQKTQAFFSLARFSDAQYQSIENYMKSSEFENKHALLEKAKEEVDLMRERKVSNNRYTVK
VQRELELDVKALANLQADRNRFLLKAVENYIQCLELGEEHDTWVFRLASLWLENADVKAV
NEMMKRGVKQIPSYKFLPLMYQLAARMGTKVSSSVTSQDVGFHHVLNELICQSSLDHPHH
TLFIILALVNANKDETFSRSRSSKSTARQPSPLDLERANVARKIIDVVRKKRAKMVKDIE
MLCNAYITLAYMDASRHKTEKKAIPIPPEQPIMQIKDLDDVIIPTMDIKVDPSGRYEDLV
TISSFKPHFHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAVMQQVFHMCSTLLQR
NAETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPQKGAHKRFRTQDWPNMSC
RKKMMEAQRLEFDDKLQAFTEVCQNFRPVFRYFCMERFLDPAVWLERQLAYTRSVATSSI
VGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLSRDIVDGMGIT
GVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQQHDEHAELNA
TLNPTPGDEIDAHRKASSMLSLLYTSAYYSIP
NT seq
8379 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcgctgcacgagctgctggtgtgctgccgaggacttgaaaacgagaaagcc
acagagagaaagaaagaggtggatcgcttcaggagactcatccgttcaccagacacggtg
gaggaacttgatcgtacgtcaggatgcaaaggctccaagcagctcacctgggatgctgtt
ttccggtttttacagaagtttcttcaaaaagagacagaacttctgcagtcaggaaaagcc
aacgtttccgccaccacgcatgcaaaccgacagaaaaagatgcaggaaattagcagcctg
atgaagtatttcatcagatgcgccaaccagcgcggtccaaagttaaagtgtgcagagctg
atttctcatgtggtggaggtcttacagagtccgttcagctgtgcggcgtatggcgaggac
tacagcagtattctgctaaagaacatcctgtctgtccgtaaatactggtgtgagatgagc
cagcagcagtggcacagtcttttggatttgtactgtgggttgttcaataagggatccaag
tcagggaccaatagagtccaagtgagtcgcatcgtctacacggtcgtttggggctgttgt
gtccaaacagagggattatcccacactctctttaacttcttcctgaaggctctgaaaagg
ccggatggacagctaatgattctggagaacctggtatctgctgtgaacgtttttctgcac
tcagtgcttctgtccaacagaaagagggtgtgtggtctgggtgaggaggttctgtcgtct
atgctgcgtgtttatactgagatgagacccagcttggtactgaaagaggagctagtgaag
tttttccacctccagctttgtgttcatcaccccagaggggcaaagactcttgagacaggt
gcttatgcagaagactgggtcagatggcagggtcagctctgcaccctctatgatgctctt
gtcagtgagatcagtcagatcggcagcagagggaagtatgccaccggctctcgtcacata
gctgtgaaagaaagtctcattgaactgacagctgatgtctgccaccagttgttcaatcaa
agcactcctgtttcggaagcgactacttctttctgtcgggatactcagcgggacagtccg
cagtgctgcaaacgcagacgaattgagccatcactgataaattgggaggtgatacgttcc
aaactgcagccccaccacagcgactttgacatgattccctggttacaggtcacagctgct
ctgatatccagatacccgtctatccggtgtgctgatgatctcgtgcctctgctggggctg
ctctgccagcttcagggtgaacagcagcgtcggggcgagagggggccgtacgtcctgcgc
tgtctgagggaggtggcgctctgccatgccaagagctcagccaactgctctgctcacgca
gctgaggcgggccgtctgtggggcagagtttgggctctggctctgcggggagtcggctca
gtccagaccgggagcttgtgtctggagctgttgcgtatcatggtgcaagaatctctggtg
cctgttgatagagagttctggaaagtcttctctggtgctgtttgtaagccctctctcgtt
ggtgccctctgcttggcccaggccttgttgaagtgctccatccctaaaagtgttcacaat
caagacgtcaccagtggagggctgatggagacgggtggagagccgcccactctgaccgac
tcaatcatcagctggctggtcatgaacgaacaaaatgaggagacggaggagaacagcaga
cctcacctcattatcaccagggattttccactgaacctcattcctagaattctggtctct
ttgacactgaaagacagcagagcaggactgatgtttctgatgggcagcctgaagccagag
agccatgcattggttcatgaatttagtcactacatatcgatggccaagagcaaactaagt
gagaatgataccatcaaagcaattcagtcagtgatgctgttgtgctctgatagtattagc
agaagagaaaaggaggacggaatttccaccacttctcgcaatttattcatgaagactttg
cctgtgaggttgctaaatgacatgtgtgacatatctaaacaactgttaagcaactcgagt
aaaaaggacaacacagtcatggagaatgaccccatggatgaagatatggatatgagcaga
acccaaatggacggtcgggaggagattgatctgtttgaagatggagatggggcacaccac
agcactttcagacctcaccagtctaatgaagaagctgctgattcaaagtacacaacaggg
accaagagtgcattatctgaggaacatttatccagacaagacttggccttcctgtctgtg
cttggtttcctgtcactatgtgcatcttcagaactcaatggtggattctccttcaaacct
ctggacacccaacgcaaattgctcaaactgttggacctcatagacttctctcagatgctt
cacctccacatgtatctttcattgctgaagaaactcccagcagaaatcacatctctggat
cctgaagaatttgatactcttctaaggcctctggcagatatttgttctctatatcggcaa
gaccaggaggtgtgtgctgccatcctgtgctctcttctgccgtccatccgctgtctgggc
cgcactccttctgtgagcgagcaggaagatgagatgtcacatataaaaggagctctgctc
aaagtcatatcaggattctgcatcttaggtaaatctggcaaatgtacttcagctgtgaga
gtggcactaaggcaatgtttactggctttgctggaggtggacccatgctgtaagtgggcg
gagctaacactgcgggaggcggagctaccggtgtctgtggttctctcctctcatttagca
gatgcccatcaccatgtgtgtatgttggcagcactgtccgtggagagcttgttccttaaa
aaaggaccggatggcagtgggaagaggatgcttcctctaaagaaccagcagatggccttt
gagaatatttacctcaaggctcaggaaggaatgagggggcagaaaaactgtccttcagaa
gacttacctgacgagacctttaatcgacgggcagtcttgctgaaaagtgtctcgatggtg
atgtcctgcagtcctgtgtgtgagaagcaagccctgtttgcactcgttcagtcctacaag
gagaacagcattgatgagcagctaatcaaaaagcaaattgacggtttgatttgcaacaac
ctggctgacattgtggtggagctgttaatgacgctgcatgagacagaaggggcggcagcg
ggtggaggagacctacagaaatttactggagagttggatcctgctccaaacccaccgttc
ttcagctcatatgtgatcaaagccacgctggactacctgagcaaatgccacagtgccaat
cacaagtctctggtcgccatcctgtccaagactcctatgtccattcagaagattctcata
gcaatctgtcagaaggctgctgagaccaccaacggctatgagaggcaccgcatacttatg
atgtaccacctgtttgtcagcctgctgctcagagaggtgaaggacgggctgggcggagcc
tgggcgtttgtgctgcgtgacatcatctatacgctcattcaccacatcaacagcaggtca
tgtcagcaggatgaggtgtccactcggagtctctccctgtgttgtgacttgttgtccctg
gtctgtcagacagctgttcagtactgtgatgatgctctagagagccacctgcaggttatt
gttggtactctcacagcacaggtcactgatcagtctgccatatctcagcaggtcctcagt
ctactaaggttcctggtaattgaaaacccggagaacagcatgttgagaaattccataccc
ctattggagccttttcctgaccgagcacgctttagagatctgagagccgcccaacacgct
ctcaaatacagctcaggagccttcactctcagacaggaaattgagcattttctgtctgta
acatcttgtgattctttgcccctggcccgtttggaggggttgaaagatctaaaaaggcaa
cttcacagccataaacagcagataggacaactcttgaaagaatgccatgctgatcctgcc
agctgtattttggtgaagctggttcttaaccttcttcagctttgcaaaatcgcagctaac
catcctggtggaggagacatcttgaaggctgctggccggtgcctaggagaacttggtcca
gttgacttatcatccattgctttgcaccatgggaaagaccagctgtatgctagagcagcc
gatttgttccctgacgttccttttcagtggatcttcatcatcctgaactgcatggacaat
gcacttacacatcacagtattgcagtgcgtcaggctgctggcatatgtctgaaggacata
ttggccactcagtgtgggattgaatttggggaaatgtataaaagcaaaagggaccctttg
ctggcatacctaaacccctttcgctctgccaagaaacgggagaccattgtgagtatggaa
gtgacctcagagtccagacataggctggacaatgctgaactctggttagtgcaacctggt
ggacacaaggactggttaaagaacctgtgtatggccctgttagacagtggaggtgtccgc
aatgaggctctgcttctcaccaggcctttatgtgaggtaaaaacagaattttgtcagagg
atgctgccactctttgttcatgatattcttctgggagatgtggatggttcctggagacag
ctgttatccacaaacatccagagtttcttcaatcagtgccgcagaccctccacacccacc
agccgccccaccacccccatgctctctgattcagggaacagtattgatgttggcaaccag
agccagatagacaaaacctcactccgcagcatgatggcagtcatagactatctcaggcaa
cagagccgcccagtggcacctggaagtcatgaatatgggacggtgtgtgattcaaatttt
tggctggatctaaattatctggaggtggctggagccgctcagatgtgttctgcccatttc
actgctctcctgtactctgagatctacgtggacaagatcagatccgacatggagcagatc
caaaggccacagtctcgagtgtcgagacggatcacgtttgaggagagcagccagacactg
tccatcagcagtgtgaatgaaaagagtttagaagactctggcatcagtctccaggatctt
ctgattgaagtgtacagatgcattggagaacctgacagcctgtatggatgtggaggaggc
aagttaatcagtcctctgactagaattcgaacatatgaacatgaggccatgtgggacaag
gctttggtttcatacgacctccactccaacctcccagaggtcacacggcagaccggcata
gtagagggtctgcagaactttggtttgtgtagtattctaaacacgtatcttcatgggctg
gagaaagaaggggtggagtggggtcctgaacttcgagagctacgctttcaggcggcgtgg
agaaacacacagtgggactgtgacctgcctgagagaaatgagaagctgaagcctggcatc
aacgagtccttgttcaatgccgtccaggctttgagagatagagaattctccctatttgag
caaaccctcaactacgccagaggtcatgaggtcgaggagttgtgtcgtggtagtctggag
gccgtgtcttcactctatccagctctctgtaacctgcagagaattcgtgaactccagagt
gtcgaggagcttttctccaggcctgtaactgactccagccttaatgaagtgtacaggaag
tggcaacagcactccgatctcttaactgacagtgatttcagcctggtcgagcccgtctta
gccctgcgctcctccatacaagaaacattgatttcctcagagacagatccagaccggaag
aactacctgatttcttcctattcctcccacctgatggagctgtgcaagctggctcgttct
gcaggccacacgcagctggcagagcgggcagttttccacatgaagcggcacagcctggta
gctggcggtggtggtggcagcagctcatgggcctggcagctggaggaggcgcaggtgttc
tgggtgaagaaggaacacgggctggctctggggctgctcaaacagatgatccataaacta
gaggatctggtgtgtgtgaaccctgctgtggtgccggtgtattcggagtgcttgagactg
tgtggaagctggctggctgaatcctgtctggagagccctgctgtcatactggagaaatat
ctggagagggctgtggaggtcattgaggaccactgtggcgattcaaacgctaaacttcag
agccagaagacccaggctttcttttcgcttgcccgtttctctgatgcacagtatcagagc
atcgaaaactacatgaagtcatcggagtttgagaacaagcacgctcttctggaaaaggcc
aaggaggaagttgacctgatgcgggagaggaaggtcagcaacaacagatacacagtgaaa
gttcagagggaactagagctggatgtcaaggcactggctaacctgcaggccgaccgcaac
cgcttcctcctcaaagctgtggagaactacattcagtgcctggaactgggagaggaacat
gacacctgggtcttcagactggcctccctctggctggagaatgctgatgtcaaagctgta
aatgaaatgatgaagcgtggtgtaaagcaaatcccatcatataagttcctgcccctgatg
tatcagttagcggctcgaatgggcaccaaagtgtccagctctgtgacctcacaagacgtg
ggattccatcacgttctaaatgagctgatctgtcagtcatctcttgaccacccccaccac
actctcttcatcatcttggcactggtcaacgccaacaaggatgagactttctctcgcagt
cgttcgtccaagagcactgcgcgccaaccttcacctctggacctggaacgggctaatgtc
gctcgtaagattattgacgtggttcgtaaaaagagagccaagatggttaaagacattgag
atgctttgcaatgcctacatcactttggcatacatggacgccagtcgccataaaactgaa
aagaaagccatacctattcctcctgaacaacccatcatgcaaatcaaagaccttgatgat
gtcatcattcccaccatggacatcaaggtggatccatcaggcagatatgaagaccttgtg
actatcagctcgttcaaacctcactttcacttggctggaggcgtcaacctacccaagata
atcgactgtgtgggttcagacggcaagagcaggagacagctagtcaagggtcaggatgat
ctgaggcaggacgcagtcatgcagcaggtctttcacatgtgctccaccctcctgcagcgc
aacgcagaaactcgcaaaaggaaactcaacatccgccggtacaaagtggtgccgttttcc
cagcgcagtggtgttttggagtggtgttctggcactgtgcccattggagagttcctggtc
gacccacagaagggggcgcacaaacgcttccgcacacaggactggcccaatatgtcctgt
cgcaagaaaatgatggaggctcaacggctggaatttgatgacaaactgcaggctttcact
gaggtgtgtcagaacttccggccagtattccgatacttctgcatggagcgctttctggac
cctgcggtgtggctggagagacagctagcgtacacccgcagtgtggccacctcttctatt
gttggttacatcgttggcctgggcgatcggcacattcagaacattcttatcgatgaacag
actgcagaactggtccacatagacctgggtgttgcgtttgagcagggcaaaatcttgccc
acccctgagacggttcccttcagactgtctcgagacattgtggatgggatgggcatcaca
ggggtggagggcgtcttcaggagatgttgtgagaagacgatggaagtcatgaggagttct
caggaagccctgttgaccattgttgaggtgttgctgtacgaccctctgtttgattggacc
atgaaccctctgaaggccttctacctgcagcagcacgacgagcatgcagagctcaatgcc
acactcaaccccacgccaggagatgagatcgacgcccaccgcaaggccagcagcatgctg
tctctactgtacacatctgcctactacagtatcccatga
DBGET
integrated database retrieval system
