Sinocyclocheilus grahami (golden-line barbel): 107562829
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Entry
107562829 CDS
T04918
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
KO
K09447
interferon regulatory factor 7
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh04623
Cytosolic DNA-sensing pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107562829
04621 NOD-like receptor signaling pathway
107562829
04622 RIG-I-like receptor signaling pathway
107562829
04623 Cytosolic DNA-sensing pathway
107562829
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107562829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107562829
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107562829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
DUF4194
T2SS_PulS_OutS
Motif
Other DBs
NCBI-GeneID:
107562829
NCBI-ProteinID:
XP_016103045
UniProt:
A0A672RXY1
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAAMQGSAIGKPQFGPWLIEQVESGKYEGLCMIGNDIFRIPWKHNSRRDLGDGDVKIFKA
WAVVSGKINEHHNDKAKWKTNFRCALHSLKNFEMLEDHSKDPDDQHKVYRIIRPQNHQEI
QSVEPDQLPFITDLYSAANYMSDEMEQELLSQVETMDLNHQHAESQPWETFSQQIIPTTS
SNYYETPYSDVQSFQNNTPLQDQQLYTTVQQLNLPALCDLEISINYRRTEVLKTRLCSPL
VQFHYQCDPSELRGQPIRFPSTEGLIDQKQIQFTKRILDSIQRGLQLEVNQYGIYGFRQD
KCKVFVSTSDPSEIQNPEPRKLHQNTRELLFSFDKYIRDLMDFKENRRGSPDYTIYLCFG
EKLPDGRPLERKLITVKVVPLICREFHERAQMEGASSLRNENISLQISHNSLFDLINSLG
LPSVA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgcagggaagtgcaatcggcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgtgcatgataggcaatgacatatttcggatc
ccctggaaacacaactcacgaagagaccttggggacggcgatgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaacgagcaccataacgacaaagcgaaatggaagacg
aatttccgttgtgcacttcatagtctaaaaaactttgagatgttagaggatcactccaaa
gatccggacgaccaacacaaagtctatcgcatcatccgtcctcaaaaccaccaagagatc
cagagtgtagagccagatcaacttccattcattactgatctctacagtgcagctaattac
atgtctgatgaaatggagcaggaattgctcagccaggtggagacaatggatctaaatcat
caacacgcagaatcccaaccatgggaaaccttttcccaacaaatcattccgaccacctca
agcaactactatgagactccctactcagatgttcaatcctttcagaataacacacctctc
caagaccagcaactctacactacagtgcagcaattgaaccttccagctctctgtgacctg
gagatctcgatcaactacagaagaacagaagttttgaaaactcgcctgtgttcaccactc
gttcagtttcactaccagtgcgacccatctgagctgagaggtcagccaatccgcttccca
tccactgagggtctgatcgaccaaaaacagatccagttcactaaacgcatactggacagc
attcagagaggcctgcagctggaggtaaaccaatatggcatctacggcttccgtcaggac
aagtgtaaagtcttcgtcagcaccagcgacccgtctgagatccagaacccagagcctaga
aaactgcatcagaacaccagagagcttctgttcagctttgataagtacataagagatctg
atggattttaaagagaacagacggggttctccagattacaccatctacctgtgcttcgga
gagaagcttccggatggaagaccactggagaggaaactgatcactgtcaaagttgtacct
ctgatttgccgtgaatttcatgagagagctcaaatggagggagcgtcctctcttcgcaat
gaaaacattagcttgcagatctcccacaacagcctttttgaccttataaattctttgggt
ctgccttcagtggcctaa
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