Sinocyclocheilus grahami (golden-line barbel): 107562921
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Entry
107562921 CDS
T04918
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107562921
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107562921
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107562921
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107562921
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107562921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107562921
NCBI-ProteinID:
XP_016103158
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MGSRSIGAVHSARCYLVLILQLLTQLPRANSVLRYRVAEEGPADVHIGNVASDLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLPQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGID
RYELIQDSRDGGSSLRRPANGPTNGNGGDRRRVSETGAGPASRSSVFELQVADTPEGQKQ
PQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPRFERAVYEAEM
PENTPPGTPVLQVRAADRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREE
VSQLRFTITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENVL
VDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYFL
HTSALLDYEATREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAEN
NAPGERVVTVVASDADSGKNAEIAYSLDPSVNGAFYIDADHGDIRATGALDREQRERYEF
RVIARDKGTPSLQGSATVIVQVTDRNDNAPKFVQEVFTFYVKENLLTNSPVGMVTVTDAD
EGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERRSTYSFRVRAV
DGGEPPQSATATISLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVSASDGDTGS
NADLRYTLVGGNPFRLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGVPSLCATALV
HVFINESLANATLVDAQVSRSLAVPLYMDIAGDPDSERALGKQRLSVAIGVLAGAAAVIL
VILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLLAQGSQNERGRKPRRDKRNNGT
AKSERSLYSGIMTVNACRRGGGDEEEEDEDVSSASERIAARYCAAANGDLSSPRLGSRRH
QSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNGTGNADAMSLSS
DQCSDYGCQTVKYSKQPLRRVTFSVVSQAPDQGCYDSGVEDSETPSSKSSSGPRLGSLPL
PEDGYERTTPEGSVGEEEHVENGKKPSVRKV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggagcattggcgcagtgcactctgcgcgctgctacctcgtgcttatcctg
cagctgctgactcagctcccgcgcgccaattcagtgctgcgctaccgcgtggcagaagag
gggccggccgatgtgcatattgggaacgtggcttcagacctggggctgtccacctctggg
atcgggacaggtgatgtcactttcgctttggaatctggctcagaatacttcaaaattgac
aacgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgccgcag
tgtcagatgatatttgatgaaaatgagtgctttttgaactttgaggtatcagtcataggt
cccctacagagttgggtggatctgtttgatggccgtattgtagtcacagacatcaatgac
aacaccccctcttttccttcaccagtactcacactgtctgttgaggagaatcggccaatc
ggcacactctatctccttcccacagccacagaccgtgattttggtcgtaatggcattgat
cgctatgagcttatccaggacagtagagatgggggatcatctttgcggcggcctgcgaac
ggaccgaccaatgggaacggtggtgaccgaaggagagtgtcagaaacaggggcaggacct
gccagcaggagcagcgtgtttgaacttcaagttgccgacacacctgaaggacagaaacag
ccccagctgatcgtgaaagggcctctggaccgcgaagcacgagattcttatgaactcgtt
ctacgggttcgtgatggcggcaaccctccccgctcctcacaagctctgttacgagtgtcc
atcacagacgtcaacgacaacagtccacgctttgagagagccgtgtatgaagcagaaatg
ccagaaaacaccccacctggcacacctgtcctgcaggtgcgtgccgcagaccgtgatgtc
ggcgtgaacgggcaggttgagtatgtgtttggagcagcgacggaatcagtgaggcgcctt
ctgaggttggatgaagcatctggttggctgagtgttctgcatcgcatagaccgcgaggaa
gtttcgcagctacgcttcaccatcacagctcgtgaccgcggccaaccacctcgcactgac
cgcactacagtcgttctcaacgtaagggatgaaaatgacaatgtacccattgtggaaatt
cgaaaaattggacgaatccttgttcgggatggcgctgcaatggttccagagaacgtgttg
gtggacactccagtagcattagtacaggtgtcagaccgcgaccagggagaaaatggtgcg
gttacctgcactgtggttggggatgtgccatttacgttgaaaccggcgggtgagacagcc
ctagcacctccaccagccacggatgatgcatttgaacgaaacaaaaagaaatattttctc
cacacctcagcacttttggattacgaagctactcgtgagtatagtgtcactatcgtggca
gtggactccggtagcccaagcctctctagtaacagttcccttctggtacgtgtggtggac
atcaatgaccatgctcccacttttgcccagagcttagtggaagtgcattttgcagagaat
aatgccccaggagaacgagtggtcacagtagtggcttctgatgcagacagtggtaagaat
gcagagatcgcatactcactggacccatctgttaatggagcattttacattgatgccgat
catggtgatatccgtgccactggggcactagatagagagcagagggaacgctatgaattt
cgtgtgatagctcgagataagggcaccccgtctctgcaaggctctgctactgtcatagtt
caggtcacagacaggaacgacaatgcccccaaatttgtccaggaagtcttcacattctac
gtcaaagagaacctgctcaccaatagccccgtcggcatggtgactgttaccgatgcagat
gaaggcgagaatgcagagttgagtctttttgttgagcacgatgaagaggagggtggagag
gagggcaaagaggggaagcaagaagttttctccattgaaaataacactggaaccattttc
tcctctgcatcctttgaccgcgaacgacgtagtacatactcattccgcgtgcgtgctgtt
gatggtggagaaccgccacagtctgccaccgccaccatctccctgtttgtcactgatgaa
aatgacaacgcgccatccatcacatcacccgctaatgaatcatacacccttctgccaccc
gctagcggagctcggactgtagtccgcacagtctcagcctccgatggcgacacagggtct
aatgccgatctccgctacactctggtaggcggaaacccttttcgtctgtttgagattggc
tcaagtagtggggtcataaccttggcagagcccctggagagaagacacaggggtctgcac
cgcttggtggtccgggtcaatgacagtggcgtgccttccctttgtgccacggcactggtg
catgtcttcatcaatgagagcttggccaatgctacgctggtggatgcacaggtgtcccgc
agccttgcagtccccctctatatggatattgcaggtgacccagacagcgagagagctttg
ggtaaacaacgcctgagcgttgccatcggtgtcctggctggtgctgccgccgttattctg
gtgatccttctggttgtgacagcacgacagtgtggggcacagggtaagaatggctatgag
gctgggaagaaggagccagaagaggactttttcagtccacaacctccccctctgctagcc
cagggctcccaaaatgaacgtgggcgtaaaccccgcagagacaagcgtaataacggtact
gccaaatctgagcgttctttatacagtggaattatgacggtgaatgcctgcagacgtggg
ggaggcgatgaagaagaggaggatgaagatgttagcagtgccagcgagaggattgcagca
cgttattgtgcagctgctaacggagacctaagcagtccaagactaggctcaagacgtcac
caatcaagtccagatctggcacgccactacaagtccagctcacctttgcctgcagtgcat
cttcagcccaactcaccacccgtggaaggcaagaagcaccaagctgtgcaggaactgccc
cccactaacaccttcactggcaacggcaccggtaatgcagacgccatgtcactcagctca
gaccagtgctccgattacggctgccaaactgtcaagtacagcaaacagcccctcagaaga
gtgacattttctgtggtgagtcaggctcctgatcaaggctgctatgatagtggagtggag
gactctgagaccccaagcagcaagagttcctctggacccagactgggatctttaccgctg
cctgaggatggatatgaaaggacaacaccagaagggagcgtaggcgaagaggagcatgtg
gaaaatggtaaaaagccatctgtgagaaaggtctga
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integrated database retrieval system
