Sinocyclocheilus grahami (golden-line barbel): 107562964
Help
Entry
107562964 CDS
T04918
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107562964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107562964
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107562964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107562964
NCBI-ProteinID:
XP_016103209
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSSSLQEHPTESPEEKMSAEETDKSTAADASAGDEEEEWLYGGEGESKETEEEEAKLTAA
ISATSAPPDTEEDTATTNNNNTTTTTTTTGNGVASQEEAPGEDEDSESDSDDDDDDVRVT
IGDIKTGAPQYTAYGGTPVNLNIKSAGSRAYGAGSKVKGIDLEAPGSINGVPVLEVDMES
FEEKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRLRMGLDIHNIGSTTSKISVSIISCY
LISFLSLIFLTGIPITVPPPNFPPPTGGPPPSLINIDNSGHPGGYDGRPVAPYPFPTGGF
PPPMQGAVNPWPGLMDNPKQWDYYARRDKEREKERERDRPRERGHERDHSPSSVVFNSDE
ERYRSYRDYGDRGYERHRERSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDS
HRRHKHKKSKRSKEGKEPSEERSADQENQEAME
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaagtctgcaagaacatcccacggagagcccagaggagaagatgtctgcggag
gagacggataaatccaccgccgctgatgcgagtgcaggagacgaggaggaggaatggctg
tacgggggtgaaggtgaaagtaaagaaactgaagaagaagaggccaaactgacagcagcc
atcagtgcgacctctgctcctcctgataccgaggaggacaccgcgaccaccaacaacaac
aacaccaccaccaccaccaccactactggaaatggtgtggccagtcaggaggaagcacct
ggagaagatgaagacagtgagagcgatagcgatgatgacgatgatgatgtccgcgtcacc
attggagatatcaaaacaggagcaccacagtacacggcatatgggggaactccagtgaat
ctgaacataaagtcagctggcagcagagcatatggagcaggtagcaaagtgaaaggcata
gacctcgaagctccaggcagcatcaatggagttccagtcttggaagtggacatggagtcc
tttgaggagaaaccatggaggaagccaggtgcggacttgtctgactattttaactatggt
tttaatgaggacacgtggaaagcatactgtgaaaagcagaagaggttacgcatgggcctc
gacattcacaacattggatccaccaccagcaagatctcagtaagcataatcagctgttac
ttaatttctttcttatctttaatttttttaacagggattcccatcactgttcctccaccc
aatttcccccctcccactggaggacctcctccttcacttattaatatagacaacagtggg
cacccgggaggatatgatggacgtcctgttgctccatacccttttcctacaggtgggttt
ccgccacccatgcaaggagctgttaacccctggcctggtttgatggacaacccgaagcag
tgggactactacgctcggcgagacaaagagagggaaaaagagcgagagagggacaggccg
agggaacgtggccatgagagagaccatagtccctcctctgtggtttttaacagtgatgaa
gaacggtatcgttcttaccgtgactacggagacagagggtatgagaggcatcgggagcga
tcgagccgtgagaaggaggagcgtcatagggaaaggaggcacagagagaaagaggaaggg
aggcacaagtcatcacggagcagtagcagacggagacatgacagcgaggagggtgacagt
caccggcgccataagcacaagaagtccaagaggagcaaagagggcaaggagcccagcgag
gagcgttctgctgaccaggagaaccaggaggccatggagtaa
DBGET
integrated database retrieval system
