Sinocyclocheilus grahami (golden-line barbel): 107563100
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Entry
107563100 CDS
T04918
Symbol
dhx30
Name
(RefSeq) putative ATP-dependent RNA helicase DHX30
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107563100 (dhx30)
03029 Mitochondrial biogenesis [BR:
sgh03029
]
107563100 (dhx30)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107563100 (dhx30)
Spliceosome [BR:
sgh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107563100 (dhx30)
Mitochondrial biogenesis [BR:
sgh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
107563100 (dhx30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DSRM_2
OB_NTP_bind
DEAD
HA2_C
AAA_22
dsrm
AAA_19
HA2_N
ATPase
AAA_16
nSTAND3
NACHT
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
107563100
NCBI-ProteinID:
XP_016103372
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MAASCAALMRVRALVTLRRKTLEVNKDIWSNWTSVCHYRTKVGVTHKHRRAPPETDQKGR
ADLLLEFPQPKNLLFATLSRSLGLSDLSQYVQYSCTDGEVKRATVTLHWPERIETEGFGS
RKVEAERHAAAAALRKLRELGVLSQGTQPSVTGTTRRKGRQTSVWEDEDDVAVHDRLKYL
PFQKKAQKERAQGPIEEDPAVIEALSVFPKPKALLGSIIQVATSSNRVRELLQYRTTGGK
VKTCELTVRWPEEMTFTADGRRRLEAESNAAALACLRFKELKLLDEQNNPLTHARYHQQE
VREAGERHRRPCRIQIPTDLERRVQEYLTQNPVEAEVQKLWDEEEQRPVHHDDDDDDDLI
TDAITGKRYRALRHEEAESLSDHLLGLWMRAGPGRGAELPVDSYKESVLEAVRSSQVVVI
AGETGCGKTTRIPRFLLEGQVRRGEGAECNILVTQPRRISAVSVAHRVAQEMGPALRHCV
GYQVRLESRPPERSGGALLFLTVGVLLRKLQSNPGLQGISHVIVDEVHERDVNTDLLLAL
LLSSIKNNPDLRVLLMSATGDTQRLSQYFGRCPVVHVPGFMHPVQARFLEEVLTEMGRPT
PPRRDREEEKDVAPDLDLVADVIEHIHSNREPGALLCFLPGWQDIKAVQQKLEEKAAFRS
GSQLILPLHSSMAVTEQQTVFQRPPDGQRKIVLTTNIAETSITIDDIVHVLDAGCQKEQN
YDTRTKVSGLNTVWISQANVTQRRGRAGRCQPGHSYHLFPRKQLDRMAVFPVPEILRTPL
ESVIIQAKIHCPHSKAVDFLAQVLDSPDSQAVRVAVKNLMDIGVLDAAENLTPLGERVAC
MSCDPRLGKALVLSALFSCALPVLSVAACLTRDPFYNSMQNRALVSKAKAALSGSSCSDH
LVFSRVVQSWKELQGRESKQEFLDKYTLSGASLRFIHGLMQQFGENLCEAGLLDASAECL
RLSSGLNRHSQQEQLVKAVLIAGLYPHLIQVKRGTVTKGGRYRPENLSYRTESGPVLLHR
SSANRGNPDLSSRWLTFFSAVKSNGQVFIRDSSVVHPLALLLLTDCDLSERVVGDVVEVL
LPGHSLIRWEFSPHVWELLWDLRTSLQAMIHRSLRHRRSTSGGCKDSELVALLVELLNNT
DPASGSVQEEISTENIRSDSL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcctgtgcggcactcatgcgggttcgcgcactggtcactttaaggagaaaa
actcttgaagttaataaagacatctggtcaaactggacgtctgtgtgtcattataggact
aaagttggtgtcacgcataaacatcggcgcgctccgccggaaacggatcagaaaggtcgt
gctgatctcctcctcgagtttccccagccgaagaacctcctgttcgccacactgtccaga
tccctgggtctgtccgatctgtcccagtacgtccagtacagctgcaccgatggagaggtc
aagagagcgacagtcacgcttcactggcccgagaggatcgagaccgagggcttcgggtcg
cggaaggtggaggcggagcgtcacgcggcagccgcggctctccgtaaactccgagagctg
ggagtcctcagtcaaggaacgcaaccctctgtaacaggaacgacgagacggaaagggagg
cagacgtctgtctgggaagatgaagatgatgtggcggtccatgatcgtcttaaatatctg
ccattccagaagaaagcccagaaggaaagagcccaagggcccatagaagaggatccagca
gtgattgaggcgctctccgtatttccaaagccaaaggcacttcttggcagcatcattcag
gtggccacatcatccaatagagtccgagagctgcttcagtacagaactaccggtggtaag
gtaaagacgtgtgagttgaccgtacgctggcccgaggagatgacctttaccgctgatggc
cgtcgcagactggaggcggagtcaaacgcagcagcactggcttgtctccggtttaaggag
ctgaagcttctggatgagcagaacaatcctctgactcacgccagataccatcagcaggag
gtgcgtgaagctggagagagacacagacggccctgccgcatccaaatacccacagatcta
gagcgcagggttcaggagtacctcacacagaatccagtggaggctgaggttcagaaactg
tgggatgaagaggagcagcggcccgttcatcatgatgatgatgatgatgatgacttgatt
acagatgctatcaccggcaagcggtaccgtgctttacgccacgaggaggcggagtctctc
agcgaccacctgctcggcctgtggatgagggcggggcctggcagaggggcggagcttccc
gtggactcctataaagagagcgtgctggaggcggtgaggtcctcacaggtggttgtgatc
gcaggagagacgggctgcgggaagaccacacggatcccacgcttcttgttggaggggcag
gtcaggagaggagagggggccgagtgcaacatcctggtcacgcagcctcgccggatcagc
gccgtgtctgtggcgcaccgtgtagcgcaggagatgggacccgctctccgtcactgcgtg
ggataccaggtgcgtctggagtcccgtcccccggagcgcagcggtggcgctctgctcttc
ctcacagtcggagtcctgctgcgcaaactgcagtccaaccccggtctgcagggcatcagc
catgtgatcgtggacgaggtgcacgagagagacgtcaacacggacctgctgctggcgctg
ctgctctccagcatcaagaacaatcctgacctgcgagtgctgctcatgagcgccaccgga
gacacgcagcggctctcgcagtatttcggcagatgcccggtggtgcatgtgccgggattc
atgcatccggtgcaggcccggttcctggaggaggtgctgacggagatgggtcgaccgaca
ccaccgaggagagaccgagaggaagaaaaggatgttgctcctgatctggatctagtggct
gatgtgatagagcacattcacagcaatagagagccaggcgctctgttgtgttttctcccg
ggatggcaagatattaaagctgtgcaacagaaactggaagaaaaagcagctttcagatcc
ggctcacagttgattttaccgttgcactccagtatggcagtaacggagcagcagacggtg
ttccagcgtcctccagacggacagaggaagatcgtcctgaccacaaacatcgcagagacc
tccatcactatagacgacatcgtgcacgtgctggacgccggctgtcagaaagagcagaac
tacgacaccagaaccaaggtgtctggtctgaacacggtctggatttcacaagctaacgtc
actcagcgaagaggaagagcgggccgctgtcagccgggacattcctaccacctcttccct
cgcaaacagctggaccgcatggctgtgtttcccgtcccagagatcctgcgcactcctctg
gagagcgtcatcatacaggccaagatccactgtccccacagcaaagctgtggacttcctg
gcacaagtgctggattccccggatagtcaagcagtccgagtcgctgtgaagaacctgatg
gatattggtgtgctggacgctgctgagaatctgactccgctgggagagcgcgtggcctgc
atgtcgtgtgacccgcgtctggggaaggcgttggttctctcggctctgttctcctgcgct
cttcccgttttgtctgtggcggcctgcttgacgcgagacccgttctataacagcatgcag
aaccgggcgctcgtctccaaggccaaggcggctctcagcggctccagctgcagcgatcat
ctggtcttcagtcgagtcgttcagagctggaaagagctgcagggcagagagagcaagcag
gagtttctggacaaatacactctgtctggagccagtctgcgcttcatacatggcctgatg
cagcagttcggagagaatctgtgtgaagctggacttctggatgcttctgctgaatgtctg
cgtctgtcgtctggtctgaatcggcacagtcagcaggagcagctggttaaagccgtgctg
atcgccggactctatcctcacctcatacaggtgaaaagaggcacagtgaccaaaggtgga
agatatcggccggagaatctgtcgtatcgtacggaaagcggccctgtgcttctgcatcgc
tcctctgccaaccggggaaacccggatctgtcgagtcgctggctcaccttcttctctgcg
gtcaaatcaaacggtcaggtcttcatcagagactcttcggtggttcatccgctggcgctg
ctgctcctcacagactgtgacctcagcgagagagttgttggagatgttgtggaggtgctg
ttaccgggtcactcactcatccgatgggagttttctcctcacgtctgggagttactgtgg
gatctgcgcacttccctgcaggccatgatccaccgcagtctgcgccaccgcagatccacc
tccggcggctgtaaggacagcgagctcgtcgctttattagtggagctgctgaataacacg
gatccagcgtctggcagcgttcaggaagagatcagcacagaaaacattcgatccgacagt
ctgtaa
DBGET
integrated database retrieval system
