Sinocyclocheilus grahami (golden-line barbel): 107563430
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Entry
107563430 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107563430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107563430
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107563430
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107563430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
ECSCR
Motif
Other DBs
NCBI-GeneID:
107563430
NCBI-ProteinID:
XP_016103794
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MTISELWARLHFLQGGGAPLSLPRSSVRPGSSQARTTSGSSMGDDRFISASVTNDIETLP
ELSHEIEAPYYDVGILLTVALVVLAIIMIFALRFRCRSNRTWDSVHQQTMRAISRLETRT
YSSQGCSGSQRSCGAPGSNSSSNSSPVCAICLEEFMDGQELRIISCAHEFHKECVDPWLL
QHRTCPLCMHNIMGKQPQGSDLASRLPQRSRMPPPPPEHSQAFLLPHNYSNQHPYPQHPV
PFSLRHHYPRNPSGPLPQMGHYGSSPPLHPRTLRCIPSRPLGASCAYHLAPDAHHGHPHR
TGGHGCRTGGHHYAAPRRSCHRCPGGPLRNASGSRMHHVASSANHATHHHLPCGGGSHSR
QDDGSCSGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRS
SLSSDYDPFVYCGPGKAPRRGSMEVTQRPRSLDSVVNRTGGGSGGDAGAICPEEQQQQVA
VFSHVHYHRHRHHYYKDGELSQGPGRGCDEDQEAMSSAAAASGPCLVTKDKDSSGCQVQH
QQSCHCPKTDLSSKRVEDRDPDPVSTSGASVILPSPPLTSPSLPCCHKGPGWTTSRKAAG
CPLEAPSPVVHFHQSLDLQDDCSIHIHYGQGAGSYCCTPPPDMAPTLLPVPLILDSTGMT
DWPCCSGAHVVWQKQVQQAHSEPQLLGPTSGMDRPLCRAYHGPGDELPTDCLYCQTLHNS
QGEYV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctcggagctgtgggccaggctccatttcctccaggggggtggagctccgttg
tctctgccgcgatctagtgttcgtcctggcagcagccaggcgaggactacttcgggcagt
agcatgggcgatgatcgctttatcagtgcaagtgtcactaacgacatcgaaactcttcct
gagctcagtcatgaaatcgaggctccttactatgacgttggcatcctgttgactgtggct
ctagttgtgttggccatcatcatgatctttgctctacgcttccgctgcaggtccaacaga
acctgggactctgtgcaccagcagaccatgcgtgccatcagcaggttggaaacacgcaca
tacagctctcagggttgctctggctcccagcgttcttgcggggctccagggtcaaacagc
agctccaattccagcccagtctgtgccatctgtcttgaggaattcatggatggccaggaa
ttgagaatcatctcctgtgctcatgagttccataaggagtgtgttgacccctggctccta
caacaccgtacctgcccactgtgcatgcacaacatcatgggtaaacagcctcagggttca
gatctggcatcccgtctgccccaaaggagtcgaatgcccccccctccaccagagcacagt
caagccttcctccttccccataactattcgaaccaacacccttatccccagcaccctgtt
cccttttcccttcgccatcattacccccgtaacccctctggacctttaccccagatgggc
cactatggcagctctccccctcttcatccaaggactctacgttgcattcccagcagaccg
ttgggtgctagctgtgcgtatcacttggctccggatgcccatcacggacatccgcacagg
acaggcgggcacgggtgtcggactggggggcatcactatgcggcccccagaaggtcgtgt
caccggtgccccggaggacctttacggaacgcctcaggttctcggatgcatcatgtggcg
tcatccgcaaaccatgcaactcatcatcacctgccatgtggaggaggctcacacagtcgc
caagacgatggaagctgctcaggagggagttaccatacagagcggagcggttaccttgca
gacggaccggctagcgattccagctcgggttcgtgccacggctcgtccagcgactctgta
ttgaactgtacggacatcagcctgcagggtgtctatggcagctggtccacttttcgtagc
tcgctcagcagtgattatgacccatttgtctactgcggaccgggcaaagctccacgcaga
gggagcatggaggtcacgcaaaggcctcgttccctggactcggtagtgaaccgaaccggg
ggtggaagcggcggagatgccggtgccatttgcccagaagaacagcagcagcaggtggct
gtgttcagtcatgttcactatcataggcatagacaccactattacaaggatggggaactc
agtcaagggcccggccgaggctgtgacgaggatcaagaggccatgtcctcagctgcggca
gcaagcgggccttgtcttgtaactaaagacaaagactcctccgggtgtcaggtacagcac
cagcagtcctgccactgccccaaaacagacctcagttcaaagagggttgaggatagagac
ccggaccccgtttccacctcaggtgcctccgtgatccttccctcccctcctttaacctct
ccgtccctgccctgttgccacaaaggcccagggtggacaaccagtcggaaagcagccggc
tgtccattggaagcgccttcgccggttgttcacttccatcaaagcttggaccttcaggat
gattgtagcattcatatccactacggacagggagcgggaagctactgttgcacacctccg
ccagacatggcccccacactgctgccggtgcccctaatcttggactcgacgggtatgacc
gactggccgtgctgtagcggggcacatgtggtgtggcagaagcaggtgcagcaggcccat
tctgagcctcagctcctgggacccacttctggaatggacagacccctgtgtagggcctat
catggtccaggggacgaacttcccacggactgcctgtactgccaaactctacacaatagt
cagggtgagtatgtctga
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