Sinocyclocheilus grahami (golden-line barbel): 107563871
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Entry
107563871 CDS
T04918
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107563871 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107563871 (mid1)
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107563871 (mid1)
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107563871 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
zf-RING_5
zf-RING_2
PRY
NDNF
Motif
Other DBs
NCBI-GeneID:
107563871
NCBI-ProteinID:
XP_016104325
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCPSLDESSKPYSAFQCPTC
RYVITLNQQGLDGLKRNVTLQNIIDRFQKASLSGPNSPSETRRCSRDPFPSVAVDDGRVM
SSPCEAVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTKPVPDSRL
RGLACPEHGEEKVNMYCVTDDQLICSLCKLVGHHREHQVAALGERFDKLKHMLDSNLSNL
IKRNSELENLMAKLIQTCQHVEHNAAHQESKLAEECDTLINIVQQRRQIIGTKIKEGKVV
RLRKLAQQIANCKQFVERSSSLITQADLVLKETDHARFLQTAKSISERVSMATASSQVLI
PEINLNDTFDAFTLDFSREKKMLEGLDYLTAPNAPTIREELCTASHDTISVHWTSEDEFS
VVSYELQYTISTGQTNVISLCNSMDSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAMNQAG
SRSSPPAKLKTNSQPFKLDPKAAHRKLKVSHDHLTVERDEASSMKSHAQDRFGSTGNYGV
TGNVFIDSGRHYWEVLIGGSTWFAIGIAYKSAPKHGWVGKDSASWVLSRCNTSWAVRHNS
KEFPIEPSPHMRRLGVLLDYDSGSLAFYDAAGTQHLYTFDVAFSQPICPVFSVWNKCLTV
LTGLPIPDHLEISDPRD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgcccaatctgtctggaacttttcgaggatcct
ctactgctgccctgcgcccacagcctgtgcttcaactgcgcccatcgcattctggtgtcc
cactgtccctcgctcgacgagtccagcaaaccctactctgccttccagtgtcccacctgt
cgctatgtcatcactctcaaccagcagggtctagacggcctcaaacgcaacgtcactttg
cagaacatcatcgaccgcttccagaaggcatctctgagcgggccgaactcgccgagcgag
acgcgccgctgcagccgtgatccgttcccctcggtggcggtggatgacggcagggtcatg
agttcaccgtgcgaagctgtccagtgccagttctgcgagcaggatccgccgcaggaggcg
gtcaagacctgcgtcacctgcgaggtttcgtactgccaggaatgcctgcgcgccactcac
cccaacaagaagcccttcacgggacaccggctcaccaaacccgtgccggactcgcgcctc
agaggactggcctgtcccgagcacggagaggagaaggtcaacatgtactgcgtgacggac
gaccagctgatttgctcactgtgcaaactggtcgggcatcaccgtgaacaccaggtggca
gcgctgggagagcgattcgacaagctgaagcacatgttggattccaacctcagcaatctg
atcaagaggaacagtgagctggagaacctgatggccaagctgatccagacgtgtcaacat
gtggagcacaatgcggctcatcaagagagcaaactggctgaagagtgcgacacactgata
aacatcgtacagcagaggagacaaatcatcggcactaagatcaaagaaggaaaggtggtt
cgcttgagaaagctagcgcaacagatcgctaactgtaagcagttcgtggagagatcgtcc
tcgctcatcactcaagccgatctggttctgaaagagacggatcacgctcgattcctgcag
accgcaaagagcatctcagagcgagtctcgatggcgacggcgtcctcgcaggtcctgatc
ccagagatcaacctgaatgacacgttcgacgcgttcacactggacttttccagagagaag
aagatgctggagggtctggattaccttacagctccgaatgctcccactatccgcgaggag
ctttgcacggcgtctcacgacaccatcagcgttcactggacatcagaggatgagttcagc
gtggtttcttacgagctgcagtacaccatctccaccggccagacgaacgtcatcagtctg
tgtaactcgatggacagctggatgatcgtgcccaacatcaagcagaatcactacacggtt
cacggcctgcagagcggaaccaagtacatcttcatggtgaaggccatgaatcaggctggg
agccgcagcagcccgccggccaaactcaagaccaacagtcagccgtttaagctcgaccca
aaggcggcccacaggaagctgaaggtgtcacatgaccatctgacggtggagcgggacgaa
gcctcgtcgatgaagagccacgctcaggaccgcttcggcagcacggggaactacggcgtg
acggggaacgtgttcatcgacagcggcaggcactactgggaggttctgatcggaggaagc
acatggtttgctatcgggatcgcctacaaatcggctcccaagcacggctgggtgggtaag
gactcggcatcatgggtactgagccgctgcaacacctcgtgggccgtgcgtcacaacagt
aaggagtttcccatcgagccgtctcctcacatgcggcgtctgggagtcctgctcgactac
gactccggctctctggcgttttacgacgctgcgggaacgcagcacctgtacacctttgac
gtcgccttctctcagcccatctgtcccgtcttcagcgtgtggaacaagtgcttgaccgtc
ctcacggggctccccattccggaccacttagagatcagcgacccgcgtgactga
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