Sinocyclocheilus grahami (golden-line barbel): 107563875
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Entry
107563875 CDS
T04918
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107563875
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107563875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
107563875
NCBI-ProteinID:
XP_016104329
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MRKADRFVDVITRVDGVKYAELVLVKELDRESRAFFALKLVAADGGNPGKSGATNVTVKV
KDANDNSPLFDHSHYSVDVPEDTPVDSLLLDLNALDPDEGLNGQVMYEFGKQVTTEIRQL
FKLDYKTGHLTLQSPVDYEDETTYEIDVQASDLGHNPVPSMCKIIINIRDVNDNPPEIII
TSITSVTDGVAHVSEATGQDILVALIGIKDKDTGANGQSVHFSVDVITRVDGVKYAELVL
VKELDRESRAFFALKLVAADGGNPAKSGATNVTVKVKDANDNSPLFDHSHYSVDVPEDTP
VDSLLLDLNALDPDEGLNGQVMYEFGKQVTTEIRQLFKLDYKTGHLTLQSPVDYEDETTY
EIDVQASDLGHNPVPSMCKIIINIRDVNDNPPEIIITSITSVTDGVAHVSEATGQDILVA
LIGIKDKDTGANGQVSCTLNGGHGNFRLKRAYEGSYTIVTMAPLDREKIAEYNLTIVAED
FGVPPLRTVTHYIIRLTDVNDNAPTFSAKIYEGFIEENQLPGTYITTILASDQDSGLNGE
ITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKRLDLRVQASDRGWPQLHNNAVLI
INVVDQNDNVPSISQPPLVNGSAEIQLPKDAPPGYIVTRIVAKDSDAGLNAELTYKLYDG
GDFGFAIDPNTGEIYINRKIAYDEYDLWKVLATVNDNGHPSLTSTATIHFTLTESAPSNG
NFYDEREDGEPKQWTLILILALTSSSLLFLAILSFILCKSRKNGQKRQANLPDAVDIPYA
KEHNAVSMISCQTANVFDTHAFHSTTAIGTPEKLHNSVQATGEVFNETPQTFKSKYRSVA
GEIDGYSTLPGYGKDNARPITVWKGNSMMTIAVRDPQISGKDSGKGDSDANDSDSDISEG
LKKDYTSYKGLWACTSECRILGHSDRCWSPSVSVNSRHLSTFSRTRPSSQATLQRSSYDT
QTNRSVALHSLTEDQQSQYDYIHVCSPQSQRRQDSENIVFTHSTKPIATESPGRFTEA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggcagacagattcgtcgatgtcataacgcgagtggatggggttaaatatgcg
gagttggtgctggtcaaagagcttgaccgcgaatcccgcgcttttttcgcgctcaaactc
gtggcggcagacggcgggaatccggggaaaagcggcgccactaatgtcaccgtcaaagtg
aaggatgctaatgacaacagcccactgtttgaccacagccattactctgtggatgtgcca
gaggacaccccggttgattcgctactgctggacttgaacgctctcgatccggacgaaggt
ctcaatggacaggtcatgtatgaatttggcaaacaagtcacaacagagatcagacagcta
tttaaactggattacaaaactggacatttgacattgcagagccctgtggattacgaagac
gagaccacgtatgaaattgacgtgcaagccagcgatttaggtcacaatcctgtgccctcg
atgtgcaaaatcatcatcaacatcagagatgtgaacgacaacccgcctgaaatcatcatc
acgtccatcacgtcagtaacagatggtgttgcgcatgttagcgaagctacaggtcaagac
atcctggtggctttaatcggcatcaaagacaaggacactggagcgaacgggcaaagcgtt
cactttagcgtcgatgtcataacgcgagtggatggggttaaatatgcggagttggtgctg
gtcaaagagctcgaccgcgaatcccgcgcttttttcgcgctcaaactcgtggcggcagac
ggcgggaatccggcgaaaagcggcgccactaatgtcaccgtcaaagtgaaggatgctaat
gacaacagcccactgtttgaccacagccattactctgtggatgtgccagaggacacccct
gttgattcgctactgctggacttgaacgctctcgatccggacgaaggtctcaatggacag
gtcatgtatgaatttggcaaacaagtcacaacagagatcagacagctatttaaactggat
tacaaaactggacatttgactttgcagagccctgtggattacgaagacgagaccacgtat
gaaattgacgtgcaagccagcgatttaggacacaatcctgtgccctcaatgtgcaaaatc
atcatcaacatcagagatgtgaacgacaacccgcctgaaatcatcatcacgtccatcacg
tcagtaacagatggtgttgcgcatgttagcgaagctacaggtcaagacatcctggtggct
ttaatcggcatcaaagacaaggacactggagcgaacgggcaagtgagctgcactctgaac
ggcggacatggaaacttcaggcttaaaagagcgtatgaagggagctacacgatagtcacg
atggctcctctggatagagagaagatcgcggagtataatttgactatagtggctgaggat
ttcggtgtaccgccgttacgcacggtaactcattacattatacggcttacagacgtcaac
gacaatgctccgacattcagcgctaagatatatgaaggtttcattgaggagaatcaactt
ccaggtacctacatcactacgattttagccagcgatcaggattctgggcttaacggggaa
ataacctatgagctttttgactcggacaccaacagcgtctccaggtttgctattatgaat
caagcgggaaacgtttacgccttgcaaagttttaattacgaagtcacgaagcggctagat
cttcgcgtccaggccagcgaccgaggatggccgcaacttcacaacaacgctgtactgatt
atcaatgtggtcgatcagaacgacaacgtgccttcgatatcgcaaccgccactcgtcaac
ggatctgccgaaatccagcttcctaaagacgcgccacccggttatatcgtgacccgaatc
gtggcgaaagattcagacgccggtttgaatgcggagctcacttacaaactctacgatgga
ggcgatttcggtttcgccatcgatccgaatacgggggaaatatacatcaaccgcaaaatc
gcttacgacgagtacgatttatggaaagtcttagcgacggttaacgataacggccacccg
tcgctaacctcaacagctacgattcatttcaccctaactgagtctgcgccctcaaacggc
aatttttatgacgaaagagaggacggcgaaccaaaacaatggacgcttattttaatcttg
gctttgacgagttcctcgctgctgtttttggctattttatcgttcatactatgcaaaagt
cgcaaaaacggtcagaagagacaagctaacctcccagacgcagtggatattccttacgct
aaagagcacaacgccgtgtcgatgatctcctgccagactgccaatgtgttcgacacgcat
gcatttcactccacgactgccattggcacacctgagaaactacacaacagcgtgcaggcg
acaggcgaagtttttaacgaaaccccacagactttcaagagcaaatacaggagtgtggcg
ggggaaatagatggatactccactttgcctggttatggtaaagacaacgctcgacccatc
acggtctggaaaggaaattctatgatgaccatcgcagtcagagacccacagatcagcggc
aaagacagcggaaaaggagacagtgatgctaatgacagtgattctgacatcagtgaaggc
ctcaagaaagactacacgtcatataaaggtctgtgggcttgcaccagtgagtgcaggatc
ctgggtcactcggacagatgctggagcccgtctgtgagcgttaatagcagacatctgtcg
accttctcaaggacgaggccgtcctcacaggccacgcttcagaggagcagttacgacacg
cagaccaacagaagcgtggccttgcacagccttacagaagaccagcagagtcagtacgat
tacattcacgtctgctctccacagtcacagcggagacaagactcggagaacatagtcttc
acacactccaccaaacccatcgccacagagagtcccggcagatttacagaagcctga
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