Sinocyclocheilus grahami (golden-line barbel): 107564069
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Entry
107564069 CDS
T04918
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107564069
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107564069
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107564069
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107564069
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107564069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_4
Cadherin_CELSR2_9th
DUF7171
He_PIG
NOMO1-like_2nd
PepSY
Motif
Other DBs
NCBI-GeneID:
107564069
NCBI-ProteinID:
XP_016104552
UniProt:
A0A672KQZ9
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MMCQSANEMWSRWSAMLVWIFLFLCCSADVVSTIIYQVTEEQPPNTLIGSLASDQGLPDT
GHLYKLEVGAPFLRVDGKTGDIYTTEIPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKG
TGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYA
LTTGPEAANLFSLQVAQDSDEKLPQLIVLGNLDREQRDSYDLNIKVVDGGSPPRQSSALL
RITVTDANDNVPKFEKSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQASPTV
QRLLSIDRNTGTVFVKGLVDREEISMLKFYVQAKDNGPQSKSSKALVTITVKDQNDNEPS
IRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRPAS
ETGNDRKRKYFLQTTMLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNSPVF
SPSLYEVEFAEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRV
MRQLDREQLNHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMP
PLSPVGMVTVNDRDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLK
AVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKFLDPRTSPETHVESVEAEDIDI
GLNSELDFSIVGGNPHGLFHISLEGEITLAKEFTSKHIGLHRLVVKVKDKGMPPRHTTAL
VHIYVNETIGNVSHIEGLVGHSLYTPLEMDIAGDPDYSRDPHSNIIFAVLGGFCVVILII
AVAMIIRHVVLKENKSGYQAGKKETKDLYAPKPGPKSNKNKKIKKSKAPKPANPSEEDEG
GSLQKGLKFNLMNDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKK
HQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANSSKYSSKQLPHRRVTFSTANQAQDL
QDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRP
LPDVAMTGKCTHECTEYGHSDSCWMPGQPSPNRAKSVKSGPKLSTSVPYQEREDQEHLMA
DSSSKLHREERSGGGSNKVASVRFLPPYTSAYSTGGDSSKDCPREEIPLSQTADYAPATT
PSSQGSKREIYL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgccagagtgccaatgagatgtggtcacggtggagtgccatgctagtgtggatt
ttccttttcctctgttgctctgcagatgtagtcagcaccatcatctaccaggtgaccgag
gagcagccgcctaacacactgattggcagcttggcatctgaccagggcttgccagacacc
ggtcacctttacaaactcgaggtgggcgctcctttcctccgtgtggatgggaaaacaggg
gatatctacactacagagatcccaatcgatcgtgagactctcaaggactgtcgcaacctt
tttgagggtgatccttgtttcctagaatttgaggtgtctattacagacctaatgaaagga
acaggacctcggctcatcgaaggccgcatcgagatcttggatgagaacgacaacactcca
cagttctcttcacctgtcttgacactgtcgatcccggagaacacgcacgtgggtgcgctc
ttcgcaattcctgtggccactgacagggattctggaagcaatggcattgccgattatgcg
ctaacgactggccctgaagctgccaaccttttcagcctgcaggtggcgcaagactcagat
gagaaattgccacaactcattgttttgggaaacctggatagagagcagcgagattcatat
gacctcaacataaaagtggttgatggtggctctccgccccgccagagtagcgccctgctc
aggatcaccgttacagatgccaatgacaatgtgcccaaatttgagaagtcacactacgag
ggtgagctcccagaaaacagcccagtgggtcattctgttcttcaagtgaaggccaatgac
tctgatatgggacccaatggagaggtgacctacagcctccaccaggcatcaccaactgtt
cagaggctcctcagcattgaccgcaacacgggcaccgttttcgtcaaaggcttggtggat
cgtgaagagattagcatgctcaagttctacgtccaagctaaagacaatggtccacaatca
aagagctccaaagcccttgtgactattacagtgaaggaccagaatgacaatgaaccctcc
atcaggatccggggcattggccttgtgacgcatgaagatggtgtcgctaacatatcggag
gacatgcctgtaggcacagctgtggctctggtggaggtatcagatcgtgatgaaggtgaa
aatgcagttgtgacctgtgtggtcgcaggggatgtcccattccaactgcgtccagctagc
gaaacaggcaacgaccgcaagaggaagtacttcctccagacaaccatgctactggactat
gaacggatcaaagactacaggattgaaattgtggcagtggactctggcaaccctgcacta
tccagcacaaattccctgaaggtgcaagtgacagacatgaatgacaactccccagtcttc
tcaccttctttgtacgaggtagaatttgctgaggagaaccagccaggtgacaaggttctg
gatgtggtagccacagatgccgacagcgggactaatgcggagctgacatacagtatcact
ggtggatcagtccccgaggggctctttgaaattaaccctaacacaggagaagtgcgtgtc
atgaggcagttggaccgtgaacaattaaatcactatcaatttctagtggcagcagctgat
aaaggtgtaccaagcttaagaggaactgccactgttgttgttaaggtgctcgacaggaac
gacaatgaccctaaatttatgcttaatggttacagcttttcagtccaagaaaacatgccg
ccccttagtcctgttggaatggtaacagtcaatgatcgcgacgagggcgagaatgctcgt
gttcaactttctgtagaaccagacaatggcaagtttatgattcaaaatggaacgtacact
atactttcgactatttcctttgacagggaaaaggagagcacctacagtttccgacttaaa
gccgttgacggaggtgatccaccacgttcttcctacgttggcattaccattaatgttctt
gatgagaatgacaatgctccatacgtcaccaagccctcaaactcttcatacaagttcttg
gatccccgcaccagcccagaaacccacgtagaaagtgttgaggcagaggacattgacatc
ggtttaaattcagaactggatttcagtatagtagggggcaacccgcatggattgttccac
atctctttagaaggtgagattacgttggctaaagagttcacatccaaacacattggtctc
caccgtctggtagtaaaagttaaggacaaaggcatgccgccacgccatacgactgcactg
gttcacatctatgtcaatgaaaccatcggcaatgtctcccacatcgaaggacttgttgga
cacagtctttatacgccacttgaaatggacattgcaggagatcctgattattctcgagac
ccacatagtaacattatttttgcagtcttgggtggcttttgtgtggtcattctaatcatt
gcagtggctatgatcatcaggcatgtcgtgctaaaggagaataaaagtggctaccaagca
ggcaagaaggagaccaaagacctgtatgcccccaaaccaggacctaagagcaacaagaac
aagaagataaagaaaagcaaagctccaaagcctgccaacccatctgaagaggatgagggg
gggagtcttcagaaaggcctaaagttcaacctcatgaatgatagcgtcaacgatagtcct
aggattcacctgccgctcaactacccccctggaagcccagacctagggagacactaccgg
tctaattctcctctgccatccattcagctccaacctcagtcaccttctgcctcaaagaaa
catcaggcagtgcaggacctgccagcaaccaacacctttgtaggaaccggggacaacaac
tcaacaggctcagaccagtattcggattacagctacaaggccaactcttcaaaatatagc
agcaaacagctcccgcatcgcagagtgaccttctccacagccaatcaggcgcaagatctg
caggatccctctcagcacagttactatgacagcggtctggaagagtcagagacgcccagc
agtaagagttcttcaggaccccgtatcgggcccctcgccctacctgaagaccactatgaa
cgcaccaccccagacggcagcatcggagagatggaacaccctgagaacgatctgaggcct
ctacctgacgtggccatgacgggaaaatgcacacatgaatgtacggaatacggccactcg
gattcctgctggatgcctggacagccctcacccaaccgcgccaagagtgtaaagagtggg
cccaagctctccacctccgtgccttaccaggagagggaggatcaagagcacctgatggct
gacagcagctctaagcttcacagagaggagcggagcggaggcgggagcaacaaagtggcc
agcgttcgctttttgcctccctacactagtgcctattctacaggtggcgactccagcaag
gactgcccccgggaggagatccccctgagtcagacagccgattatgcccctgctactaca
ccctccagccaaggctccaaaagagaaatctacctgtga
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