Sinocyclocheilus grahami (golden-line barbel): 107564832
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Entry
107564832 CDS
T04918
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107564832
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107564832
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107564832
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107564832
Ubiquitin system [BR:
sgh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107564832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
107564832
NCBI-ProteinID:
XP_016105491
LinkDB
All DBs
Position
Unknown
AA seq
2536 aa
AA seq
DB search
MTATTRGSPVGGNDSQAPDAQNQTQTLLPQNQTPSPNSSNETSPISPPEEAGQGEAPPTQ
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAVDLSKKGLDVRCEACQRFF
HDGLTISFTKILMDEAVSGWKFEIHRCIISNTQRLVELCVVKLAQDWFPLLELLAMATNP
HCKFHIYNGTRPSESVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGTLSGFQILHDR
FTSGQALNVQIIAALIKPFGQCYEFLTLHTVKKFFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILQLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAG
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMDNMRQFSREHTGFDPQTVRAGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ESNVLQLDPTLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRLVIQ
GSDDIATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILSRIKANSTHTKVELFIGGEIVDPAEDRRLIGQLNLKDKTL
ITAKLTQVSTNMPSSPDSSSDSSTGSPGNHTNQYSDGPNPEVESCLPGVIMSLHLRYISF
LWQIADLGCTLSMPLLRDGARVLMKLMPPDNTTVENLRAICLDHAKLGENSLSPTLDSRF
FGPSASQVLYLTEVVYALLMPASGTLGDDASGFQCNLLKSGGLPLALGMLTRNNFLPSAD
METRRGAYLNALKISKLLLTGVYLVIFLHGDVTVFVLQINQATHEQALVLQNALQSIPNP
ASECMLRSVSLRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGMVHLVFSSNEEI
SQIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALLPTALDTLSKEKAWQTFIIDLLLHCQ
SKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLN
YAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRSGETGVEETILEGHLGVTKELLAFQTPE
KKFYIGCEKGGANLIKELTDDFIFPASNVFLQFVKSGEFPAEQAIPVCSSPASINAGFEL
LVALSVGCVRNLKQIVNTLTDMYYLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMN
SVIQQLYMIPPIRNAILAIEGTGSDIDDDDTSGDEKQDNESNVDPRDDVFSYHQQFDDKP
SLNKAEDRQEYNIGVLRRLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALE
FFNSLVDSLDEALKALGHPSMLSRILGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQ
NLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWEREC
AIKFNDYFEFPRELDMEPYTVAGVAKLEGDEVPPESQVIAENSDPNSSSRYRLVGVLVHS
GQASGGHYYSYIMQRHCNGSDGQKDRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVF
DHMMKRMSYRRQKRWWNAYILFYERMDAAGGDGELLKYISELTLTPRTNQPKMPLAIEAS
VRKQNVQFMHSRMQYSLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAAR
FLFSTGFHTKKVVRGPATDWYDALCILLRHSKNVRSWFAHNVLFAFPTRFSEYLLECPSA
EVRGAFAKLMVFIAHFSLQDGPCPAPVTSPGSSTQACDGVTLSDHLLHSVLNLLRREVSE
HGRHLQQYFNLFVMYANLGLTEKTQLLKLSVPVTFMLVALDEGPGPPIKYQYAELGKLYA
VVSQLVRCCDVSPRMQSSINGNPPLANPYGDPSLTAPIMPLQQLVTEILFVRTSYVKKII
EDCSTSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSW
QTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFTNCSVAHQILQSNGD
LKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSNGYFLERSHSARMTLAKA
CELCPEEEPNDQEAPDEHDSSPPEDTALYPHSPGTQYQQPNNQPYTGPAAQHMNNPQRPQ
ESWEGTDEVPPVQTKE
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccgcggctcgcccgtggggggcaacgatagccaagcgccagatgcc
cagaaccagacccagaccctgctgccccagaaccagacgccctcaccaaactcctccaat
gagacgtctcccatcagtccaccagaggaagcagggcagggagaagccccacccacacag
gaagaggaggagcctgccttcccccacacagacctggccaagctggacgacatgatcaac
cggccgcgctgggtggttccggtcctgcccaaaggagagctggaggttctgctggaagct
gctgtagatctcagtaaaaaagggctcgacgtgaggtgcgaggcgtgtcagaggtttttc
catgacggcctgacgatctcattcaccaaaatcctgatggatgaggccgtgagcggctgg
aagtttgagatccacaggtgcatcatcagtaacacccagcgtctggtggagctctgcgtg
gtcaagctggctcaggattggttccctctgctggaactgctggccatggccaccaacccg
cactgcaagttccacatttacaacggcacgcgtccgtccgagagcgttcctgcgggagtg
cagctcgccgacgatgagctgttcgcccggccgcccgacccacgctctcctaagggttgg
ctggtggacctcatcaataagttcgggacgttgagcgggttccagattcttcacgatcgc
ttcacgagtggccaggctctcaacgtgcagatcatcgcagctctcatcaaacctttcggc
cagtgctacgagttcttgactttgcacacagtgaagaagtttttcttgcccgtaattgag
atggtcccacagtttctggagaacctcacagacgaggagctgaagaaggaggccaagaac
gaggccaagaatgatgctctgtccatgatcataaagtccttgaagaacctggcgtccaga
gttccgggtcaagaggaaaccgtcaagaacctggaaatcttcaggttaaaaatgatcctt
cagttgttgcagatttcctcatttaatgggaaaatgaatgcactgaatgaagtgaacaag
gtgatctcgagcgtgtcgtattacacgcaccggcacggaaacccagaggaggaggagtgg
ctgaccgcagagcgaatggctgaatggattcagcagaacaacattctgtccatcgtgctg
agagacagtctgcatcagccgcagtacgtggagaagctggagaagatcctgcgcttcgtc
attaaggagaaagctctgaccctgcaggacctggacaacatctgggcggctcaggctggt
aaacacgaagcgatcgtcaagaacgtccacgatctgttggccaagctagcgtgggatttt
tccccggagcagctcgatcacctgttcgactgcttcaaggccagttggacgaacgctggt
aagaagcagcgggagaagcttctggagttgatccgcaggctggcggaggacgataaggac
ggagtgatggctcacaaagtgctcaacctgctgtggaacctggcacacagtgatgacgtc
cccgtcgacatcatggaccaggctttgagcgcccacatcaagatcctggactacagctgc
tcgcaggaccgcgacacgcagaagatgcagtggatcgaccgcttcatcgaggagctccgg
acgaatgataagtgggtgattccagctctgaagcagatcagggagatctgcagcttgttt
ggagaagctcctcagaacctcagtcagacgcagaggagtccgcacgtcttctaccgtcac
gatctgatcaaccagctccagcacaatcacgcgctcgtcacgctggtggccgagaacctg
tctgcgtacatggacaacatgaggcagttctccagagagcatacagggtttgatcctcag
acggttcgagcgggaagccggtacagccacgtacaggaagtgcaagagagactcaatttc
ctgaggtttctgctgaaggatgggcagctgtggctttgcgctccgcaggccaagcagatc
tggaagtgtctggcggagaacgccgtgtttctgtgcgaccgcgaggcctgctttaagtgg
tactccaagctcatgggtgacgagccggatctggaccccgacatcaacaaggactttttt
gagagcaacgtgctgcagctggaccccacgctgctcacggagaacggcatgaagtgcttc
gagcgcttcttcaaagctgtgaactgcagagagggcaagctggtggccaaacgcagggcg
tacatgatggacgacctggagctgatcgggctcgactacctctggaggctcgtgattcaa
ggcagtgatgacatcgccactcgagccatagacctgctgaaggaaatatacaccaacctc
ggaccaaagctacaggtgaatcaggtcgagatccatgaggacttcatccagtcgtgcttc
gaccggctcaaggcttcgtacgacacgctgtgtgtgctggacggagataaggacagcatt
aactgcgccagacaggaggccatacgcatggtgcgcgttctgacggtgctccgagagtac
atcaccgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtccagggcg
ttccgtgggaagcacatcactctggtggtgaggtttcccaatcagggccgtcaggtggag
gacttggacatctggtcccacaccaacgacaccatcggctcggtccgccgctgcatcctc
tctcgcatcaaagccaacagcacacacactaaagtagagctgttcatcggaggagagatc
gtggaccccgctgaggaccgccggctgattggacagctcaacctcaaagataaaactctc
atcacagcgaagctcacgcaggtcagcaccaacatgccctccagccccgacagctcgtcc
gactcgtccaccggctcgcccgggaaccacacaaaccagtacagcgacgggccgaacccc
gaggtggagagctgcctgccaggagtgatcatgtcgctgcatctgcgctacatctccttc
ttgtggcagatcgctgatctgggctgcaccctgagcatgccgttactgcgagacggagct
cgagtgctcatgaagctcatgcctccagataacactacagtggagaacctgcgagcgatc
tgtttggatcacgctaagctgggagagaacagtctgagtcccactctggattcacgcttc
tttggcccgtctgcttcacaagtgctctacctcaccgaggtggtgtatgcgctgctgatg
ccagccagtggaacgctgggagacgacgccagtggcttccagtgcaacctcctgaagagc
ggcggtctgcctctggcgctgggcatgctcaccaggaacaacttccttcccagtgcggac
atggagacgagacgcggcgcctacctgaacgccctgaagatcagcaagctcctgctgacc
ggcgtgtacttggttatatttcttcacggtgatgtgactgtgtttgtgctccagataaat
caggcgacccatgagcaggctctggtgctgcagaacgctctccagagcattcccaatccc
gcctccgagtgcatgctgcgcagcgtgtccctccggctggcccagcagatctccgacgag
aacttcttccaggcctcaaagtacatcccggatatctgtgtgatccgcgccgtgcagaag
atcgtctgggcttccggttgtgggatggtgcatctggtcttcagctcgaacgaagagatc
agccagatctacgagaagactaacgcaggtaacgagccggacgctgaagacgagcaggtg
tgctgtgaggcgctggaggtcatgaccttgtgtttcgctctgctccctacggccctcgac
acgctcagcaaagagaaagcctggcagaccttcatcatcgacctgctgctgcactgccag
agcaaagcggtgcgtcagatggcacaggagcagttcttcctcatggccaccaggtgctgt
atgggacacagacccctcctgttcttcatcaccctcctcttcactgttctgggaagtacg
gcgaaggaaagagcgaagcacgctggcgattacttcacgctcttgcgccacttactcaac
tacgcctacaacagcaacataaaccttcccaacgcagaggtgctgctgaacaacgagatc
gactggctcaagaggatccgggatgaggtgaagaggagcggagagacgggtgtggaagag
accattctagagggtcatctgggggtcaccaaagagctgctggcctttcagaccccggag
aaaaagttctacattggctgtgagaaaggaggcgctaatctgattaaggagctgaccgat
gacttcatcttcccggcgtctaacgtgtttctgcagttcgtgaagagcggcgagttcccg
gcggagcaggctataccggtgtgcagcagtcctgcgtctataaacgccggcttcgagctg
ctggtggcgctctctgtcggctgcgtgcggaacctcaagcagatcgtcaacacgctcaca
gacatgtactatctaggttgcgaggcgcttacagagtgggagtatctgcctccggtgggg
ccgcggccaaccaaaggcttcgtgggtctgaagaacgcaggagccacgtgctacatgaac
tccgtgatccagcagctttacatgatcccgcccatccgcaacgccatcctggccatcgaa
ggcaccggcagcgacatcgacgacgacgacacatccggagacgaaaagcaggacaacgag
agtaatgtggaccccagggatgatgtgttcagttatcatcagcagtttgatgacaagccc
tctctcaataaggccgaggaccgtcaggagtacaacatcggagtgctgcggcgtctgcag
gtcatcttcggtcacctcgccgcgtcccgtctgcagtactacgtgcccagaggcttctgg
aagcagttcaggttgtggggggagccggtgaatctgagagagcagcacgacgcgctggag
ttcttcaattccctggtggacagcctggatgaagcgctgaaagccctcggccaccccagc
atgctcagcaggatcttgggcggctcgtttgcagaccagaagatctgtcagggttgtcct
cacaggtatgagtgtgaggagtccttcacaacactgaatgtagacatcaggaaccaccaa
aacctccttgactctttagaacagtacgtcaagggggatctcctcgaaggagccaatgcg
taccactgtgagaagtgcaacaaaaaggtggacacggtgaagcgtctccttataaagaag
ctcccgccggtgttagccatccagctgaagcgcttcgattacgactgggagcgcgagtgt
gcgattaagttcaacgattacttcgagttccctcgtgagctggacatggagccctacacg
gtggcaggcgtggcgaagctggagggtgacgaggttccgccggagagccaggtcatcgct
gagaactctgatccgaacagcagctcccgctatcggctcgtgggtgtgctggtgcactcg
gggcaggccagcggcggacactactactcttatatcatgcagcggcactgtaatggcagc
gacggacagaaggaccgctggtacaagtttgacgacggcgacgtgacggagtgtaagatg
gacgatgacgaggagatgaagaaccagtgcttcggtggagagtacatgggcgaggtgttc
gaccacatgatgaagcgcatgtcgtaccggcggcagaagcgctggtggaatgcctacatt
ctgttctacgagcgcatggacgcagcagggggcgacggagagctgctgaagtacatctcc
gagctgacgctcacgccccggacgaaccagcctaaaatgcccttggccatcgaggccagc
gttcgcaaacagaacgtgcagttcatgcacagccgcatgcagtacagcctcgagtacttt
cagttcgttaagaaactgctgacctgcaacagcgtctacctgaaccctcctccaggtcaa
gatcatcttttaccagaagctgaagaaatagcgatgattagtatacagcttgctgctagg
tttctgttcagcactggattccacacaaagaaagttgttcgagggcctgctactgactgg
tatgatgccctgtgcatcctattgcgtcacagcaagaacgtccgcagctggtttgcacac
aacgtcctctttgcattccccacgcgcttctcggagtacttgctggagtgtccgagtgcg
gaggtgcgcggagcttttgccaaactgatggtgttcatcgcacacttttccctgcaggac
ggaccctgccctgctccggtcacctcgcccggctcgtccacacaggcctgtgacggtgtg
accctgagtgaccatctgttgcattcggtgctgaacttactgagaagagaagtgtccgag
cacggccggcacctccagcagtacttcaacctcttcgtcatgtacgccaatctgggtctg
acagaaaagacacagctgctgaagctgagcgttccagtcacgttcatgctggtggcgctg
gacgagggtcccgggcctcccatcaagtatcagtacgcagagctcggcaaactgtacgcg
gtggtgtcgcagctggtgcgctgctgtgacgtgtcgccacgcatgcagtcctccattaac
ggtaacccacctctggccaatccatacggcgaccccagcctcacggctcccatcatgccc
ctgcagcagctggtgaccgaaatcctgtttgtgcgcaccagctacgtgaagaagatcatc
gaggactgcagcacttctgaggagacggtgaagctgctgcgcttctgctgctgggagaac
ccacagttctcctccacggtcctcagcgagctgctctggcaggtggcgtattcctacacc
tatgagctgaggccttacctggatctcctgctgcagatcctcctgattgaggactcgtgg
cagacgcaccggatccacaatgttttgaagggcattcccgatgaccgagacgggctcttt
gacaccatccagcgctccaagaaccattatcagaaacgggcctatcagtgcattaaatgc
atggtggccctcttcaccaactgctctgtggctcatcagatcctgcagagtaacggggat
ctgaagaggaagtggacgtgggcagtagaatggctgggtgatgagctggagaggaggcca
tacacgggaaaccctcagtacagctacaacaactggtctcctccggttcagagcaacgag
acgtccaacggatatttcctggagcgctctcacagcgcccgcatgaccctggccaaggcc
tgcgagctctgtcctgaagaggagccaaatgatcaggaagcacctgatgagcacgactcg
tcgccgccggaggacactgcgctctatcctcattctccaggaacgcagtatcagcagcca
aataaccagccctacaccggcccggccgcccagcacatgaataacccacagcggccccaa
gaaagctgggagggaaccgacgaggtccctccagtccagactaaagagtag
DBGET
integrated database retrieval system
