Sinocyclocheilus grahami (golden-line barbel): 107565520
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Entry
107565520 CDS
T04918
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107565520
04020 Calcium signaling pathway
107565520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107565520
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107565520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
107565520
NCBI-ProteinID:
XP_016106253
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MILATIIANCIVLSLEQHLPGEDKTPMSKRLEKTEPYFIGIFCFEAGIKLVALGFVFHKG
SYLRNGWNVMDFIVVLSGILATAGSHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IIKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPSPDILENETVDSSEVEFACG
VRKCPEKYTCSGSWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGPTWNW
IYFIPLIIIGSFFVLNLVLGVLSGFKFKVMALNVANTAEIKLNGYRAWIDRAEEVMLAEE
NKNSGRSALDVLKRATSKKNARRRGPGEEKYSEVSTVGGPRPRVGIRTARRGPAAYMRRK
ERMLRISIRRMVKTDSFYWIVLSLVALNTICVSIVHHNQPEWLTIIQYYAEFVFLGLFLA
EMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGESFGISVLRALRLLRIFK
ITKYWTSLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRYWTSLRNLVVSLM
SSMKSIISLLFLLFLFIVVFALLGMQLFGGRELFDHVIHLSVSVKKIKFFFKRHLEYEKK
NGTPEAIQAVKQKKFRAAAAAGVSEGGRHKRHRHREFRTEARNAENHQQFGCSEKPAEEG
EDKMDETQSKNLMHMYETETIMSGKQNESQEECQREFVGDVTGIPQASGLQELQTLCTGM
EDQAESQEAPFLRHKEEFSSESKYMTGEVSDIENNGSYLNQDECMTETSIKRETSTQPLL
EMAPMTVSFKDVEASHSGKADEGNDDEDDDDDDDDDDDDDDVEKGGGQSTAPKPDTPDSM
FIFKSTNPIRRICHYVVTLRYFEMTILLVIVASSIALAAEDPVCTNSERNKVLRYFDYVF
TGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALFAFALTNLMGNNKGRDIKT
IKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKG
KFFYCTDGSMGTQKECQGYYIDYGRDRKEVKKREWRRHEFHYDNVLWALLTLFTVSTGEG
WPQVLQHSVDMTEENHGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKM
MEECNLEKNERACIDFVISAKPLTRYMPQNRQTLQYRLWHFVVSPSFEYTVLVMIALNTV
VLMMKYHSAPAAYDIVLKHLNTAFTVLFSLECILKIFAFGFMNYFRDTWNIFDFITVLGS
ISEIVVDLQSVNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAM
LFFIYAIIGMQVFGNIKLNDESHINQHTNFKTFFGALMLLFRSATGESWQEIMLSCLGGK
ECELDPSIPPTFTSPDHEGGCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDS
SILGPHHLDEFVRIWGEYDRAAWCDMGKHCHLIILASPYSFRGSVDTDMTVGKIYASMMI
MDYFKQSKAKKLRQQIEAQKSPTLPLISHSAGSALTSGGFVALSPISPQELLLQPMTHRT
DSSEDYDASQVDESGLNGMWGDDRPPEHAFRTRHKSYKAAVSHSDQTQYMEKVRGRPKEQ
RFLLSPDNSNSKSRSRSPSEERMHGVTRQGNSSESPVPSTSESSTPSGKRRLSQTSTCSH
PHISYSPLVCHTQPSSHVDDDDDDGDTTVQQMIGCCSTALWDDGAEDQEARQQESTQFEV
GEYLGSSARRYPSESFLALQDDEHSPDSAAPMETLTFEAAVATSLGRANTVSASMRTRSR
IGWQVPNGHFRKRLTQSVSLAGGEALSDAEDDKY
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccaccatcatagccaactgcatcgttttatccctggaacagcatcttcct
ggtgaggacaagacgcctatgtccaaaaggctggagaagaccgagccttatttcattggg
atcttctgttttgaggctggtatcaagctggtggcgctcggttttgtttttcataagggt
tcctatctcagaaacggctggaatgtaatggacttcattgttgtgctaagtgggattctg
gccactgccggttctcatatgaatatccccgtggatctgaggaccctgagagctgtgcgt
gtgctcagacccctcaaactagtctccggtatccctagtttacagatagttctgaagtcc
attattaaagcgatggtgccgctgctgcagatcggccttctgctgttcttcgccatcctg
atgttcgccatcatcggtctggagttctacagtggcaaattacaccacacttgcctgccc
tctccagatatcctcgaaaacgagacggtggactcgtctgaggtggagtttgcgtgtggc
gtgagaaagtgtcctgagaagtacacctgcagtggcagctggattgggcccaatgatggc
atcactcagtttgacaacatcttgtttgcagtgctaacagtatttcagtgcatcactatg
gagggatggactgccgtcctgtacaatactaatgatgctttggggcccacatggaattgg
atttatttcattcctctcattattatcggctcgttttttgtgctcaaccttgttttgggt
gtcctttctggttttaagttcaaagtcatggcattaaatgttgcaaacactgcagaaatt
aaactcaacggctaccgggcctggatagaccgagcagaggaagtaatgcttgcagaagaa
aacaagaattctgggagatcagcgttagatgttttgaaacgggccaccagcaagaaaaat
gcaaggcgtcgaggaccaggggaggagaaatattctgaagtctctacagttggtggcccc
cgcccgagggttggtatacggacagcgagacgagggccggctgcttacatgcggcgcaag
gaacgcatgttgcggatatctattcgtcgcatggttaaaaccgacagcttctattggata
gtcctcagtctggtggcgctcaacaccatttgtgtttccatcgttcatcacaaccaaccg
gaatggctcactattattcagtactacgcagagttcgtgtttcttggactttttcttgct
gagatgtttctgaaaatgtatggccttggtttccgtctctacttccattcatcctttaac
tgctttgattgtggggtgattgtaggtagtatttttgaagtggtttggggattcttcagg
cctggagagtcgtttggcatcagtgtcctcagagctttacgtctgctacgaatctttaag
ataacaaagtactggacatccttacggaacttggtggtttccctcatgagctccatgaag
tcgatcatcagtttgctcttcctcctcttcctgtttatcgtagtcttcgctttacttgga
atgcagctgtttggtggaaggtactggacatccttacggaacttggtggtttccctcatg
agctccatgaagtcgatcatcagtttgctcttcctcctcttcctgtttatcgtagtcttc
gctttacttggaatgcagctgtttggtggaagggagctttttgatcatgtgattcacctg
agtgtgtcagtgaagaagattaagttcttcttcaagcgtcacctggagtacgagaagaag
aacggcacacctgaggccatccaagcggtcaaacagaagaagtttcgggctgctgccgct
gcaggggtgtcagagggtgggcggcacaaacgccacagacatcgagagttcagaacagag
gccagaaatgcagagaatcaccagcaatttgggtgcagcgagaaaccggctgaggagggt
gaggataaaatggatgaaacacagtctaaaaacttgatgcacatgtacgaaacagaaaca
atcatgtctggcaagcaaaatgagagtcaggaggaatgccaaagggagtttgtgggtgat
gtgactgggattccccaagcatctggccttcaggagcttcagactctctgcactggaatg
gaagatcaagcagaaagccaggaagctccattcctgaggcacaaagaagagttttcatca
gaatctaagtacatgacaggggaagtctcagacattgagaataatggcagctatctaaac
caggatgagtgtatgacagaaaccagcattaaacgagagacatcaacccagcctttgttg
gaaatggcaccaatgactgtcagcttcaaagacgtggaggcctctcactcaggcaaagct
gatgagggtaacgacgatgaagacgacgacgacgacgatgatgatgatgatgatgatgat
gatgttgagaaaggaggtggacagtcgactgcccccaaacccgacacacctgacagcatg
ttcattttcaaaagcacaaatcctatcaggaggatctgccactatgtggtgaccctgcgc
tacttcgagatgaccattctcctggtgatcgtggccagcagcattgcactggctgctgag
gaccctgtgtgcaccaattcagagaggaataaagttcttcgatacttcgattatgttttc
actggcgttttcacgtttgaaatgattataaagatgatcgaccagggcctcattcttcat
gatgggtcgtatttccgtgacttgtggaacattctagactttattgtggtggttggagct
ttatttgcttttgcattgacgaatttaatgggaaacaacaaaggccgagacattaagacc
attaagtccttaagggttctccgagttctccgtcccctcaagaccatcaaaagacttccg
aagctcaaggctgtgttcgattgcgtggtcacatccctgaagaacgtcttcaacatcctc
atcgtctaccagctcttcatgttcatctttgctgtgattgcagtgcagctcttcaaggga
aagttcttctactgtaccgacggatcgatggggacgcaaaaagaatgccaaggctactac
attgactatgggagggacaggaaggaggtgaagaagcgggagtggaggagacacgagttc
cactatgataatgtcctctgggctcttctgacgctcttcactgtgtccacaggagagggc
tggccacaagttctccaacactcggtggacatgactgaggaaaaccacggcccaagcaga
ggaaaccgaatggagatgtccattttctatgtcatatactttgtggttttccccttcttt
tttgtcaacatctttgttgctctcatcatcatcacattccaggagcagggagacaaaatg
atggaggagtgcaacttggagaaaaacgagcgggcatgcattgactttgtaatcagtgca
aaacccctaacgagatacatgcctcagaacagacagaccctccagtaccgattgtggcac
tttgtggtgtcgccgtcattcgagtacacggttctagtcatgattgcactcaacacagta
gtgctcatgatgaagtaccactcggcgccagctgcctacgacatcgtcctgaagcacctc
aacactgcgttcactgtgctcttctctctggaatgcatcttaaagattttcgcctttggg
ttcatgaactacttccgtgatacatggaacatctttgatttcatcactgtgctgggcagt
atttctgaaattgtggtagatttacagtctgtgaacaccatcaatatgagcttcctgaag
cttttccgggcagccagactcattaaactgttgagacaaggctacacaatacggattctg
ctgtggacatttgttcagtccttcaaggctcttccatatgtttgccttctcattgccatg
cttttcttcatttatgccattattggcatgcaagtattcggtaatattaaattgaatgat
gagagccacattaatcaacacaccaatttcaaaacgttctttggtgccttgatgctgctc
tttagaagtgccacaggagagtcgtggcaggagatcatgctctcgtgtctcggggggaag
gagtgtgaactggacccttcgataccaccaactttcacctctccagatcacgaagggggc
tgtggcacggactttgcctatttctattttgtctcattcatctttttcagctcatttttg
atgctgaatctgttcgtggctgtgattatggacaactttgagtatttgacccgagactca
tctattctcggacctcaccatctggatgagtttgtgcgcatctggggagaatatgaccga
gctgcatggtgtgatatgggcaagcattgtcatctaattattttggcatcaccttattcc
tttaggggctccgtagacacggacatgaccgttggaaagatctatgcttctatgatgatc
atggattactttaagcagagcaaagccaagaagttgaggcaacagattgaggcacagaaa
agtcccaccctgcccctgatatctcacagcgctggatcagccttgaccagtggagggttt
gtggctttaagccccatatcaccacaggagctgttattgcagcccatgacccaccgtaca
gacagcagtgaagactacgatgcctctcaggttgatgaatcagggttgaatggcatgtgg
ggggatgatcgcccacctgaacatgcattcagaaccagacacaagagctacaaagctgca
gtgtcccactcagaccagacacagtacatggaaaaggtgcgaggacgaccaaaagaacaa
cggttcttactttccccggataactccaactcaaaatctcgttcccgctctcccagtgag
gagcgcatgcatggggtcaccagacagggaaacagctccgaaagccccgttccctccacc
tccgagtccagcaccccgagcggcaagcgtcgcctgtcccagacctccacctgctcacac
cctcacatctcctactcacccttagtgtgccacacgcaaccttcatcgcacgttgatgat
gatgatgacgatggcgacacaaccgtccagcagatgatagggtgctgtagtactgcttta
tgggatgacggtgctgaagaccaggaggcgagacagcaggaaagtacccaatttgaagtg
ggtgaatatctgggttcatccgcacgccgctatccttccgagtccttcctcgccctacaa
gatgacgagcacagccctgattctgccgctcctatggaaactcttacctttgaggcagcg
gtggccaccagcctaggccgcgcgaacacggtcagcgcctcgatgcgcacgaggtcacgg
ataggctggcaggtgcccaacggacacttccggaagagattgacacagagcgtatctctc
gctggcggtgaagctctcagcgatgcagaagatgacaaatactag
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