Sinocyclocheilus grahami (golden-line barbel): 107566006
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Entry
107566006 CDS
T04918
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107566006
09122 Translation
03013 Nucleocytoplasmic transport
107566006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107566006
03041 Spliceosome [BR:
sgh03041
]
107566006
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107566006
Spliceosome [BR:
sgh03041
]
Complex C
Other components
EJC/TREX
107566006
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107566006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Motif
Other DBs
NCBI-GeneID:
107566006
NCBI-ProteinID:
XP_016106840
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MAALILPSDWIKNWDKSGKNEFFQFFQGLAGKPSSHELVKDLQTALYELCWHAIQGNLKV
DVAVSLLADVMELRDDMPSILADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGML
KERLDPETLESLGLIKQAQQFNQKIVKIKTKLFQVITVEEPNGETPSSLYHIAAALLQHN
LIALEDLYVHPPDNQKLGLLEALLRIGDWQHAQSIMDQMPAFYATSHKAIAIALCQLLHL
IVEPLYRRAAVPKGAKGGLMTPLRNKQALRPAESFDDLSRGVFTMLCYLGPHLSHDPILF
AKVVRLGKSFMKEALRPAESFDDLSRGVFTMLCYLGPHLSHDPILFAKVVRLGKSFMKEL
MKIFCFCHHVLSLGLASLCGAVFRKYPIELAGLLQYVTNQLKAGKSFDLLILKEVVQKMA
GIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHELALPLCLLMA
QQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNQF
HTPHDAAFFLSRPMYAHQILSKYDELKKAEKGSRQQQKVHKYIAACEQIMAPVHEAVVSL
HLPRVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKLKIQIKGIEENTEMPLNKKKKE
KERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCV
FSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYTVASCTENESRRYGRFLCCML
ETVTRWHSDRAIYEKECGNYPGFLTIFRASGFDGGNKADQLDYENFRHVVHKWHYKLTKA
SVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALECRVHKICQEEKEKRPDLYALAM
GYSGQLKGRKVHMVPENEFHHKEQPVRSATPGTLQNGPGNTGKPASAGKAEEGAIEDSDK
SKDKSQAAQKTASKNSTAANKVSSSNGSSTPNSTKGSKEKEDKEKTTKEKKEKKDKNPGS
TPEAKAGGKDKQKEEKPTDSKEKTPKADKDKRKDDKKEEKSKIDGKSAEKEWSKERDVSN
DSKTKEGSKVEKNAGAGSMKSLVPRSEGVESEREQKRRKLDTHSSPSHSSAVKHHPNHST
VLPKSKEKDDEKKESDKSRDRSKEREKKEDRKDRKRDYSNSDREMSQEAKRRKDENGMSS
SKHSKSASPSESPHSNDKDNSKRSKSTSKDKSDLAKPEKTSGGKKESRHDKEKSEKKRDS
TGAKEEKKQYPLLP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgatcctcccgtctgactggataaaaaactgggacaaatccgggaaaaat
gagtttttccagtttttccagggccttgcagggaaacccagcagtcatgagcttgttaaa
gatctgcagacagccctgtatgagctctgctggcatgctatccagggcaatctgaaggtg
gatgtggctgtcagtctcctggctgatgttatggagctgcgggacgacatgccttctatt
ttagcggatgttttctgtatattagatatcgagactggctgtttggaggagaaacacaag
cgagatcattttacccagctggttggagcctgtttgatctgtgttcctgatggtatgctg
aaggagagattagatccagaaacgctggagtctctggggctgatcaaacaggctcagcag
ttcaaccagaagattgtcaaaatcaagaccaaactattccaggtcatcacagtcgaggag
cctaatggagaaacgccatcatctctgtaccacatcgctgcagctcttcttcaacacaac
ctcatcgctcttgaagacctctacgttcatcctcctgataaccagaagctggggctgctg
gaggcgctgctgaggatcggtgactggcagcatgctcagagcatcatggatcagatgcca
gctttctacgccacctcccacaaggccatcgccatcgcactgtgccagctgctgcacctg
atcgtggagccgctctaccgcagggctgcagtccccaaaggtgccaaaggtggtttgatg
acacctctgcgaaacaaacaggcactgcggccggccgaaagcttcgatgatctctccagg
ggcgtcttcaccatgctgtgctacctgggccctcacctgtcccacgaccccatcctgttt
gccaaggtcgtgcgactgggcaagagcttcatgaaagaggcactgcggccggccgaaagc
ttcgatgatctctccaggggcgtcttcaccatgctgtgctacctgggccctcacctgtcc
cacgaccccatcctgtttgccaaggtcgtgcgactgggcaagagcttcatgaaagagctt
atgaaaatattttgcttttgtcatcacgtcctttccctaggtctcgctagtctttgtgga
gcggttttcaggaaatatcccatcgagttagctggtcttctgcagtatgtgaccaaccag
ctgaaagctggaaagagttttgacctgctgattctgaaggaagtggtgcagaagatggca
gggattgagatcacggatgaaatgactgtggagcagctggaggccatgacaggtggagag
cagctcaaagcggagggtggctactttggacagatcaggaacactaagaagtcgtctcag
cgtctgaaggatgctcttctggaccacgagctggcgttacctctgtgtctcctgatggcc
cagcagaggaacggggtggtcttctctgaggggggagagaagcaccttaaactcgtgggg
aagctttacgatcagtgtcacgacactcttgtacagtttggtggcttcttggcgtctaac
ctcagcacagaagactacatcaaaagggtgccgtcaatcgatgtcctctgcaaccagttc
cacacgccacacgatgctgctttcttcctgtctcggcccatgtatgcccatcagattctg
tccaaatatgacgaattgaagaaggcagagaagggcagcaggcagcagcagaaggtccac
aagtacatcgcagcctgcgagcagatcatggcccctgtgcacgaagctgtcgtgtctctt
cacttgcccagagtgtgggatgaccttcgacctcagttctatgccaccttctggtccctc
accatgtacgacctggcggtgccacacaacgcctacgaccgcgaggtcaacaagctgaaa
atacagatcaagggtatcgaggaaaacactgagatgcctctgaataaaaagaagaaagag
aaggaacgctgcacagcgctgcaggacaagctgcaggaagaggagaagaaacagctggag
catgtgcagagagtcctgcaccgcctcaaactggagaaagacaactggttactcgccaag
tccactaagaatgaaaccatcactaagttcctgcagctctgcatcttcccccgctgcgtc
ttctcagccattgatgccgtttactgcgctcgcttcgtggagctggtgcaccagcagaag
acgcccaacttctgcaccctgctctgctacgaccgagtgttctctgatatcatctacacg
gtagcgagctgcacagagaacgagtcgcgccgctacggccgctttctgtgctgcatgctg
gagactgtgactcgatggcacagcgacagagccatctatgagaaggaatgtggcaattat
cctgggttcctgactattttcagagccagtggtttcgacggagggaacaaagcagatcag
ctggactatgagaatttccggcatgttgtccacaaatggcattacaagttgactaaagcg
tcagttcactgtctggagacgggcgagtacacccacatccgcaacatcctgatcgtgctc
accaagatcctaccctggtaccccaaggtgctgaacctgggccaggctctggagtgccgc
gttcacaagatctgccaggaagagaaagagaagaggcccgatctctatgcgttagccatg
ggctactctggccaattgaaaggcaggaaagtgcacatggtgccagaaaatgagttccac
cataaggagcagccagtgcgcagcgccacgcctggcactctgcagaacggaccgggcaac
acgggcaagcctgccagcgctggcaaagccgaggagggcgccatcgaggactcagataaa
tccaaggacaaatctcaggcggctcagaagactgccagcaaaaacagcaccgcagccaat
aaagtgagcagtagcaacgggagcagcacgccgaacagcactaaagggagcaaagagaag
gaagataaagagaagaccacaaaggagaaaaaagagaagaaagacaagaacccaggaagc
actccagaggccaaggcaggagggaaggacaaacagaaggaggagaaacccactgacagc
aaggagaagacgcccaaggccgacaaggacaagaggaaggatgacaagaaggaagagaag
agcaagatcgatgggaaatccgctgaaaaagagtggtccaaggaacgcgacgtgtccaac
gacagcaagactaaggaaggcagcaaagtggagaagaacgctggggccggaagcatgaag
tccctcgtgcccagatctgaaggagtcgagtctgaacgggagcaaaaaagacgaaagctt
gacacgcactcgtcaccgtcgcactcctctgcagttaagcaccatcctaaccacagcaca
gtcctgcccaagagcaaagagaaggacgacgagaagaaagagtctgacaagtccagggac
cgttccaaagagagggagaagaaagaagaccggaaggaccggaaacgagactactcgaac
agcgaccgcgagatgagccaggaagccaagcgccgcaaagatgaaaatggaatgagctcc
tccaaacacagcaagagcgccagcccctccgaatcgccacactccaacgacaaggacaac
agcaagcgctccaagtccaccagcaaggacaagagtgatctggccaaaccggagaagacc
tctggaggcaaaaaggaatccaggcacgacaaagagaaatccgaaaagaagagagacagc
actggcgctaaagaagagaagaaacaatatcctttgctgccataa
DBGET
integrated database retrieval system
