Sinocyclocheilus grahami (golden-line barbel): 107566072
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Entry
107566072 CDS
T04918
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgh03016
]
107566072 (trub1)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107566072 (trub1)
Transfer RNA biogenesis [BR:
sgh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107566072 (trub1)
Prokaryotic type
107566072 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
107566072
NCBI-ProteinID:
XP_016106939
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MLTTMLAGSKKYRAVAELGKATDTLDVTGNVVEEKSYDHITKEAFEEKLKQFTGEIMQVP
PLYSALKKDGQRMSVLLKQGQEVEAKPARPVTVYSLSLQDFSPPYFTIDVECGGGFYVRS
LVDDLAKALSSCAHIKELTRTKQGQFTLEEHSLKEDRWTWTDISQALQPCPKPAGQQKNA
KKAKSKYKPTSSESEGDNGDQND
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccacgatgcttgcaggatcaaagaaatacagagctgttgcagagttaggcaaa
gcaactgatacgcttgacgtcacaggaaatgttgttgaagagaagagttatgatcacatc
acaaaagaggcttttgaggagaagctgaagcagtttacgggtgaaattatgcaggttcca
cctctatattcagccctgaagaaggatggccagcgcatgtctgtcctgctcaagcaaggt
caagaggttgaggctaaacctgcacgtccagtcacagtgtacagtctctctttacaggac
ttcagcccgccatatttcaccatagatgttgagtgtggaggtgggttttatgtcagaagc
ttggttgatgatcttgcaaaagctctgtcatcctgtgctcacatcaaggaactcactcgg
accaagcagggtcagttcaccctggaagagcactcattgaaggaggatcgttggacatgg
acagatatctcacaggctctgcagccctgcccaaagccagcggggcaacaaaagaatgcc
aagaaagctaaatcaaagtataagcccacctcatctgaatctgagggtgacaatggtgat
caaaacgattaa
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