Sinocyclocheilus grahami (golden-line barbel): 107566395
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Entry
107566395 CDS
T04918
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107566395 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107566395 (dmxl1)
Membrane trafficking [BR:
sgh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107566395 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107566395 (dmxl1)
RAVE complex
107566395 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
EIF3I
Beta-prop_EML
NBCH_WD40
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
107566395
NCBI-ProteinID:
XP_016107327
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MDPFDGDEEDANVKVIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMALADT
IASTSTHIGESQGKGQSGETLDECGLKFLLAVRLHSFLLTSLPPAHRAPLLCQGLSTCHY
AWAFHSEAEEELLNMLPALQKGEPAWPELRAMGMGWWLRSTNKLRRCIEKVAKAAYQRNN
DPLDAALFYLAMKKKAVVWGLYRSHHNVKMTAFFSNNFSEDRWRKAALKNAFSLLGKQRF
QHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVVCRLYESEFEMSCSYKRILQRHVLGQDQ
QIAAHQDPFLRSMAYWVLDDYSRALDTLLEPNVDTSHEGRAGSSPCSPDVFNFYTYLRTH
PLLLRRHFGSSDKAKVGLTAEGRAVESISLTERRLFFTAAYAHLQAGCPMLALEVLSKMP
KVVKRSQARENSPETSSEHKVQASAPWPVLNGLESVSWFSSPREDSQSDSVLSLDWSQPF
VTLQDEPLELKWDSDKDDPDEEESGLAMKSIRPEKDDGAPEATSTPRGHGSDDSPALTED
ILAAQLKFSSCLKILTTELRTLSTGYELDGGKLRHQLCHWLERAVAALQRCCGYNPFLQH
LPEGISADLSQVEDLEERGAAEQARELQHRRRLWLKRNQPLLRIFLSYCSLHGSHGGGLA
SVRMELILLLQESQQDDSLQISAPAPQHLSVPLFLAWTASSKTVVANPIVHLTNLTHDIL
HTINALDAPPHPDVVSNEIYVMHTLAASLSACIYQCLCDGHRYSHVNPFTGITYQSVLLT
HQPPVRSVSIEEAILPNTSPAQWPGVSVLMRLLSASGDESQPGLPVLLCEILTAVFLSLF
VHGLATHSSHELFRIVAHPLNSRLWVSVFGGGARVPVPEKPSAHTVEDVERKQRRSRLSS
SRSDSRDVPDSPRPVVMEPDTSICKERFVPPELSIWDYFIAKPYLPPSASRVEYDSEESQ
GSEDEEDDDEGDPSSPLAEHSSNSSYSWCLMRWAMVQMVLFNLKPFSPMAGHDLLDLPMC
SPLCHAALKTLQRWEQLLLKRLEISGGPPSRFICTQLLEESVSSGPALLRRKALFESSNT
PFRSRRRAALPVRRLWQYLVKQEEVQEMFIRNIFTKKRDPNEIEADLGFPGGKARIIHKE
SDIITAFAINKANRNCLVIASSHDIQELDVSYILASQILTWVDDENEAEVKGTDDFLVVH
ARDDFSALHGSTPYTHSSPGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYY
LTGAQDGSVRMFEWGHSQQITCFRSPGNCRVTRIRFNYQGNKFGIMDADGALSLWQTSTS
GNAPKPYLTLQCHSKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPAYSLVHGFSC
HESGSTVLALASKQQLLLSGGRKGCISVLDLSLKIQRQSFQAHDSAVKALAVDASESCFM
SGSAEGNIKVWSMSTQSLLHTFSNEHARQSLFRNLGTGVMQIETGPANHVFSCGADGTMK
LRLLPDALSLYCSGVKNDVRFIM
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggacccttttgatggagatgaggaggatgcaaacgttaaagtcattgatttgtcaaag
tacagccctacgttcttcggctccgaacatgcacaggtgttatcgggacacctgcttcac
tccagcctgccgggcctgacgcggatggagcagatgtctctgatggctctagcggacacc
atcgcttccaccagcacccacattggagaaagccaaggcaaaggccaaagtggagagacg
ctggatgaatgtggactgaagttcctgctagccgttcgcctgcactccttcctcctcacg
tctctgcctccggctcatcgcgctccgctgctctgtcaaggactgtccacctgccactac
gcctgggcgttccactccgaggccgaagaggagctgctcaacatgcttccggccctgcag
aaaggagagcccgcgtggcccgagctgagagccatgggcatgggctggtggctcaggagc
accaacaagcttcgcagatgcattgagaaggtagcaaaagctgcttatcagagaaacaac
gacccgttagacgcagccttgttttatctggccatgaagaagaaagctgtggtctgggga
ctgtacaggtcccaccataacgtgaagatgacagcattcttcagcaataacttcagtgaa
gaccgctggaggaaggcagcgttgaagaacgctttctctctgctcggaaagcaacgtttc
cagcattcagcggctttctttctgctggctggatccctgaaagatgctgttgaggtttgt
atagagaagatgcaggaccttcagctggctctggtggtctgtcggctgtacgagtctgag
ttcgagatgtcctgcagctacaagcgaatcctgcagaggcatgtgttgggtcaggaccag
cagattgcggcccatcaggaccctttcttacgcagcatggcgtactgggtcttagatgac
tacagcagggctttggacacactgctcgagcccaatgtagacacgtcacatgaaggacgc
gccggatcgtctccctgtagtcctgatgtttttaacttctacacctacctccgcacgcac
ccgctgctgctgcgccgtcacttcggctcctcagataaagctaaagtgggtctgaccgct
gaaggccgcgccgtcgagtccatcagcctcacagagaggaggctcttcttcaccgccgct
tatgcacacttacaggccggctgccccatgctggctttagaggtgctctccaaaatgccc
aaagtcgtgaagcgctcacaggcacgagagaattcgcccgagacgtcgagcgagcacaaa
gtccaggcctcggctccgtggccggttctcaacggcttggagtcggtgtcttggttctcg
tctcccagagaggacagccagtcggactcggtgctcagtttagactggagccagccgttt
gtcaccctgcaggacgagcctctggagctcaagtgggacagcgataaagacgacccggac
gaggaagaatcaggcctggcgatgaagagcatccgtccggagaaagacgacggcgctccg
gaagcgacatccacccccaggggtcacgggtcagacgattcgccagcgctgaccgaggac
atcctcgccgcgcagctgaagttcagctcctgtctgaagatcctcaccacggagctgcgg
acgctgtccacgggatacgagctggacggagggaagctgcggcatcagctgtgtcactgg
ctggagcgagccgtggcggcgctgcagagatgctgcggatacaaccccttcctccagcac
ctgcccgagggcatctcggccgacctgagccaggtggaggatctggaggagcggggcgcg
gcggagcaggcccgagagctgcagcaccgacgcagactgtggctgaagaggaaccagccg
ctgctgcgcatcttcctcagctactgcagcctacacggctctcacggaggaggactggcc
tccgtcaggatggagctcattctgctgctgcaggagtcccagcaggacgacagtctgcag
atctctgctcccgctccgcagcacctgtctgttcctcttttcctggcgtggaccgccagc
tccaaaacagtggtggccaatcccatagtgcacctgaccaacctcacgcacgacatactg
cacaccatcaacgctctggatgcgcctccgcacccggatgtcgtcagcaacgagatctac
gtgatgcacacgctggctgcttccctctccgcctgcatctatcagtgtctctgtgatgga
caccgctacagccatgtgaatccgttcacgggcatcacctaccagagcgtcctgcttacc
catcagcccccggtgaggagcgtcagcatcgaggaggccatcctgcccaacacctctcct
gcgcagtggcctggtgtgagcgtcctgatgcggctgctgagcgcgtccggagacgagagc
cagcccggtctgcctgtgctcctgtgtgagatcctgaccgcagtcttcctcagcctcttc
gtccacggtctggccactcactccagccacgagctcttccgcatcgtcgctcacccgctc
aacagcaggctgtgggtgtctgtgttcggcggcggcgctcgtgttcctgtgccggagaag
cccagcgcacacacagtggaagatgtggagcggaagcagcggcgttcccggctgagctca
tcacgcagtgactccagagacgttcccgacagtcccagacccgtggtgatggagccggac
acatccatctgtaaagagcgtttcgtgccgcctgagctcagcatctgggattatttcatt
gcaaagccgtacctgcctccgtctgccagccgagtggagtacgactctgaggagagccag
ggcagtgaggacgaggaggatgatgacgaaggagatcccagctctccgctggcagagcat
tccagcaatagctcgtacagctggtgtctgatgcgctgggccatggtgcagatggttctg
ttcaacctcaagcccttctccccaatggcgggtcacgacctcttagatctgcccatgtgc
tcgccgctctgtcacgccgctctcaagacgctccagcgctgggagcagctgcttctcaag
aggctggagatttccggaggtcctccgtcgaggttcatctgcacgcagctgctggaggag
agcgtgtcatcgggtccggctctgctgaggcgcaaagcactgttcgagtcctccaacaca
cccttcaggtctcgccggcgtgccgctcttcccgtcagacggctgtggcagtatctggtc
aaacaggaggaggttcaggagatgttcatacgcaacatcttcaccaagaaacgcgatccg
aacgagatcgaggccgacctggggtttcctggaggaaaggctcgcatcatccataaggag
tctgacatcatcacggcgttcgccatcaataaggccaatcgcaactgtttagtgatcgcc
tccagccacgacatccaggagctggatgtgtcctacatcctcgcctcgcagatcctgacc
tgggtcgatgacgagaacgaggccgaggtcaaagggacggatgacttcctggtggttcac
gctcgggacgacttcagcgcgcttcacggcagcacaccctacacccacagcagccccggg
acacccatcaacatgccctggctggggggcctgcagacgggccgaggagccgccgtgctc
atcaaacgcaacatcaacaacgtgaggcggatgacgtcacaccccacgctgccctactat
ctgaccggagctcaggacggcagcgtgcgcatgtttgagtggggtcactcacagcagatc
acctgcttcaggagccccggaaactgcagggtcaccagaatacgcttcaattatcagggc
aataagttcgggatcatggatgcagacggagcgctcagtctctggcagaccagcacctca
ggaaacgctcccaaaccctatctgacgcttcagtgtcacagtaagacggcgaatgacttt
gtgtttgtgggctcgtcgtctctcatcgccaccgcaggcctgtccacagacaacaggaac
gtgtgtctgtgggatactctggtcacgccagcatacagtctggttcacggcttcagctgt
cacgagtccggctccacggttctggctctggcgtctaaacagcagctgctgctcagcgga
ggccggaagggctgcatcagtgttctggacctcagtctgaagatccagcgccagagtttc
caggcgcacgactcggccgtcaaagcactggccgtcgacgccagcgagagctgcttcatg
agcggatcggccgagggcaacatcaaggtctggagcatgtccacccagagcctcctgcac
accttcagtaatgaacacgctcgccagtcgctcttccgtaacctgggcacaggcgtcatg
cagatcgagaccggcccggccaatcacgtcttctcctgcggcgcggacggcaccatgaag
ctccgcctcctccccgacgctctgagcctctactgcagcggcgtgaagaacgacgtcagg
tttatcatgtag
DBGET
integrated database retrieval system
