Sinocyclocheilus grahami (golden-line barbel): 107566398
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Entry
107566398 CDS
T04918
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107566398 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107566398 (gli1)
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
107566398 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
107566398
NCBI-ProteinID:
XP_016107332
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MPVDMQPHQGLYHYNNTANQPSRGLAPSVRSVYSEVSSVCVAPPDSREMYNPSMTPGACM
DPYMRPPHAPPPHGMMGHRGMPPPESVSGAPYCNQSMMASHHNLTHNQPGFEHMASGDAS
CFSTPRSMLKLSKKRALSISPMSDASVDLQTVIRTSPNSLVAFVNSRCGQNAASSYGHLS
VGGMSPSLGFSSSMNFPSRPQGIMYGSPLSHPVPSCLGPPHNPRLHAPHKHTHHINNEHI
HGEKKEFVCHWKDCSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTH
LRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRK
HVKTVHGPEAHITKKHRGDTGPRPPGLTNAGQSSELLIEKEERSREDCKLLAPETALKSQ
PSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTTQEESGITSVSESGGGSGGM
CMSVQALKRLENLKIDKLKQIRRPTPPGRSAGNKLTALSATGEMMGMCAPSPLLSNRRIM
QLSAPDLGGVSGMGMPCPPNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSDVSQVGH
CQSVMGADVPSDPLSPQNSQRGGSCQISGGLPGLPSLTPAQQYSLKAKYAAATGGPPPTP
LPNMEQPGRFLRESHGQPLPPFLQQGGTRRHSANTEYGTGVIYPHQAPGNNTRRASDPVR
SGADPQGLPKVQRFNSLSNVSLMSRRNALQQCGSDAALSRHMYSPRPPSITENVMMEAME
MDPHGTAEGREQGNMIQGGDRVYMGYQHLHHHPHNASQLSPRQEGLSCMDQVYQSQMQGP
YQREEICATGMMGQGDIANSLLQQAEYGMSNCQLSPSGPHYPSLADGSGPWGQTNHLHSP
QTNTQYQGAGMQGQHYPQQGVYDPTSDTGHQRVTVKPEQFHSSMGGSSSCQNTKPLHQHR
HNANMQAYPPQSQGRGLMSRSSNVNCDFLHGQMGTQASLPQQSQAGSFPSGGGINLALPE
SRRSQTPMHQMKEMMVRNYVQSQQALLWEQQQEQRVVDGLSGKPDGMDMGGQTATMQHSP
QHQQANQNLYPGNSFQGYPNQNLMSPLQNRVPGSIKEHTTGMQGSCYGPDMVPRPPQGQK
PLSRQNSLSQQAGGAYLGSPTHLSPVHSTASPRKAVRLPPVQQQHSENFTNSNNPMYYSG
QIHMHHDIEKTQDGPCLAQQHLTGIDPNTKPTSMAYSDPAPMSNALENLDLENAQIDFAS
IIDDPEPSSYSPINPPLGHHQCSSQTSSRLTTPQTSITLPSGLSNMAIGDMTSMLTSLAG
ENKYLNTLS
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcagccgcatcaggggctgtaccactacaacaacaccgccaaccaa
cctagccgaggactggctccgtctgtcagatcggtctacagcgaggtgtcgtctgtgtgt
gtggcgccgcctgacagcagagagatgtacaacccctctatgaccccaggagcctgtatg
gacccctacatgcggccgccacacgcccccccgccgcacggcatgatgggacaccgaggg
atgcctccgccagagagtgtcagtggcgccccctactgtaaccagagcatgatggcatct
catcacaacctcacgcataaccagccgggattcgaacacatggcatcaggagacgcgtct
tgtttctcgacgcctcgctccatgctgaagctgagtaagaagcgtgctctgtccatctcg
ccgatgtctgacgccagcgtggacctgcagacggtcatccgcacctcgcccaactctctg
gtggcgtttgtgaactcgcgctgcgggcagaacgctgccagctcatacgggcatctgtct
gtgggaggcatgagtccgtcgttgggtttctccagctccatgaacttcccgtccagaccg
cagggcatcatgtacggctctccgctctctcatcccgtcccatcatgcctcgggccgccg
cacaaccccagacttcacgctccgcacaaacacacacaccacatcaataacgagcacatc
cacggggagaagaaggagtttgtgtgtcactggaaggattgctctcgagagcagcggccc
tttaaggcccagtacatgctagtggtgcacatgcgcagacacacgggagagaaacctcac
aagtgcacttttgaaggctgtaataaagcgtactcgcgtctggagaacctgaagactcat
ctgcgctcgcacaccggcgagaaaccgtacgtgtgtgaacacgagggctgcaacaaggct
ttctccaatgcatcagaccgtgcaaagcaccagaaccgaacacactccaacgagaaacca
tacgtctgtaagatccccggctgcacgaagcgctacaccgacccgagctctctgaggaag
cacgtgaagacggtacacggacccgaggctcacatcaccaaaaagcaccgcggagacacc
ggaccacgtcctccaggtctgaccaatgcaggacagagctctgagcttctgatagaaaaa
gaggagagaagcagagaggactgcaaattactcgctccagaaaccgcactgaaatcccaa
ccaagtcctggtggccagtcatcctgtagtagtgaacgttctccactagggagcgccaac
aataacgacagcggagtggagatgaacctcaatgcggcggggagtctggaggacctgacc
acacaagaggagagcgggatcaccagcgtgtccgagtccggcggaggctcgggggggatg
tgcatgtctgttcaggccttgaagaggttggagaacctgaagatcgacaaactaaagcaa
attcgccggccaacaccacctgggcggagcgcagggaacaaactgacggctctttcagca
acaggagagatgatgggcatgtgtgcgccttcacccttgctctctaaccggcgtataatg
cagctttctgccccggatctgggtggagttagtggaatgggaatgccctgcccaccgaac
gaccggcggggcagcggcaccagcagcctcagctctgcctacacagtgagccgccgttcg
tccatggtctccccctacctatcaagcagacgctcaagtgacgtgtcccaagtgggtcat
tgccagtccgtgatgggggccgatgttcccagcgacccgctgtctcctcagaacagccag
aggggcggctcatgccagatctctgggggattgccaggtctaccgagtctgactcctgcg
cagcagtatagtctgaaggctaaatatgcagcagcaacaggtggtccaccgcccaccccg
ctacccaacatggagcaacctggaagattcctgagggaaagccatggccaacctcttcct
ccatttctgcagcaaggcggcacaaggaggcacagtgctaataccgaatacggcacggga
gtgatctatccgcatcaggcacctggcaacaacacaaggcgcgccagtgatccagtacgc
tcgggtgctgacccgcagggtttacccaaggtgcaacgctttaatagcttgagcaacgtg
tcccttatgagtcgccgcaatgcactgcagcagtgcgggtctgatgccgctctcagcagg
cacatgtactcgcctcgtccaccgagcatcactgaaaatgtcatgatggaggccatggag
atggatcctcatgggaccgccgaaggcagagagcagggcaacatgatccagggtggagac
agagtctacatgggctaccagcatcttcaccaccaccctcacaatgcaagtcaactgtct
cccagacaagaaggtctgagctgcatggatcaagtctaccagtctcaaatgcaaggtccg
taccagcgtgaggagatctgtgccaccgggatgatgggtcagggtgacattgcgaacagt
cttctacagcaagctgagtacggcatgagcaactgtcagctcagcccctccggtccacat
tatcccagccttgctgatggatcaggaccctggggacagaccaaccatctccacagccct
cagaccaatacgcagtaccagggtgcaggcatgcaaggacagcactaccctcaacagggt
gtatacgaccctacatctgacactggccatcaaagagttactgtaaaaccagagcaattc
cattcatccatgggaggatcaagttcctgccagaacaccaaacctctacaccagcatcgg
cataatgcgaatatgcaggcgtatccaccgcagtcgcaaggtcggggcctcatgagcaga
tcctccaatgtgaattgtgacttccttcatggacagatgggaacgcaagccagtcttccg
cagcagagccaggcgggatcgttcccaagcggcggagggataaatcttgcactgccggag
agccgcaggtcacagacgccaatgcatcagatgaaggaaatgatggtgaggaactatgtg
cagtcccagcaagctctcctgtgggaacagcagcaggagcaaagggtagtcgatggtctc
tctgggaagcccgatggcatggacatgggaggacaaacagcgacgatgcagcacagccca
cagcatcaacaagctaaccagaacctttatcctggtaactctttccaaggctacccgaat
cagaacttgatgagcccactgcaaaatagagttcccggttccatcaaggagcatacaact
gggatgcagggatcctgctacgggccggacatggtgccacgaccacctcagggacaaaag
cctctgagtcgccagaacagcctatcacagcaggcaggtggagcttacctgggcagcccg
actcacctgagcccggtccactccaccgccagtcccagaaaagctgtgcggctcccgcca
gttcagcagcagcattcagaaaacttcaccaatagcaacaaccccatgtactactcaggc
cagatacatatgcaccacgacatagagaagactcaggatggaccatgcctggcccagcag
cacctgacagggatagaccctaataccaagcccacatcgatggcctactcggaccctgca
cccatgtccaacgccttagaaaacctggacttggagaacgctcagattgactttgcttcc
atcattgatgacccagaaccttcatcttacagtccaataaacccaccgctgggtcaccac
cagtgctcctctcagacctcctcccgtctcaccacaccccaaacctccatcacccttcca
agtggcctctctaatatggcaattggggacatgacctcaatgttgacatcccttgctggg
gagaacaagtatttgaacacattgtcttaa
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integrated database retrieval system
