Sinocyclocheilus grahami (golden-line barbel): 107566423
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Entry
107566423 CDS
T04918
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107566423
03036 Chromosome and associated proteins [BR:
sgh03036
]
107566423
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107566423
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107566423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
RRM_1
UBA
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
107566423
NCBI-ProteinID:
XP_016107368
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MEEKKKQEEETKKDTAQKTDTEQKTKVPDSVKPNPSIPSSPILTLNLPVPSTATTSNGKR
SPCNSLQQHLPPLQQPSPRYVPREVPPRFRQQEQRQLLKRGQPLPTGALNPTSACTQSGV
ISPPETPTSKRHTGLPHQSGLGAQHENCLWSIPVSKSNSSNRDKVIFNCNDTDTWPSNTY
GKSHQTPECTLNAERTSEVVSNSSSTIMATGASQQGNYPISKASINLSSSMVSSQSGPTR
GWVSEGKIDLSMGSRGQSNWGASNLNLNPSANPAAWPALGHEGPGVGSGPSSMVCSNPLS
LSMCGQGGMAPPHGTNGNGSIGCVNGNLVGDCAWGNPDVPEQHQSPTNVSFNMKPPNLKI
DGPNNSKPEPMSPVNSWRGNLSQSPTEPASEDGTAFWGNGDAKNGESKDSGWVSAGISSW
GQRGASSGGGWGDWGKQPSTEGTGWDVNDGPSQDHMSSWGPDTPASEGSRDSSEGHPRRR
ERSSSDDLAPLLPRQDLDPRVLCNTGWGQTPVRQHTVWEMEQSPDKKNGAGTEVWGSSSN
TPSSGPAPPPPGCASPNLSVPPRMETSKSEGSCRAIPNAGWGGSVSASSQPNSGWGEPPA
NKKVPNGSQCGWGDPVAEGPNTSGCNGQSWAEEKSPSWDDGTSQKKTQGWGNGTKTSSGW
GSSGSGNSGEWSDPSEMRKNDSGSSSWDTDNRNWKETQRGWGKAEPAQGGSWGDAQHSNG
SAQGWGGKLQESTCDNGGAGGIGSWSGPNSVKQSNSGWASEERQEPGDEATGWEEPSPYS
VRRKMEIDDGTSTWGDPSAYSKSVNMWDRNNSQNHPGTSNSGNSNSLTGPNNNSKSYQHH
SQGPTQNHVRGSNNNGSPNQGEFPLNRMPVVNPGWGELPNVQPNSEPSSWGEPANSNSSV
GSGTSAWGQPSRGCGGWGEGGHDSSGPYGRGNAPAGSGSCQEGPKSMQDGWGSGGEEIGM
NTGQWDADDGDMWNSPTSQDSSCNSWGQSKKGPQRGKVSNKQDDVWIMTRLIKQLTDMGF
PKDPAEEALKSNNMNLDQAMSALLEKKTELDKRGMGMSDYSNGMNKPIVCRPTNLSKDPS
LDRAPFLDKDGRLSDDASTSPFMPSPGLKLPLANSSLPSHGLSGVSSGLSMQNLNNRQMQ
NGMFGTNGAAQTRVMQQQALPPQQPVPPLSSTQPTLRAQVPQLLTPQVQAQLLQFAAKNI
GLNPALLTSPINPQQMTLLYQLQQLQAAYQRLQIQQQMMQAQRNVSGPIKQQEQQVARTI
TNMQQQIQQHQRQLAQALLMKQQQPPPSSHTGLHPNLGKASLDTFTGHPQTSGLSISDLQ
TKEQQSSPNYFSPYTLSGLNTNMNVNCMEVGSLSLKDPPQPQSRLSQWTHSNSIDSLSAS
AQHMEANLNKHGSISSAQSHVPVGKSTMEDSFSPYNLMSSSESPTSTMVSPESWTQGKSP
NEKMSSNSNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIQDVNRYLLR
DRTGGKLLEMKSTWSPGPISHTQASLSHELWKVSPGTRNSSAPSRPPPGLTNTKPSSTWG
GNSLGLSQGWTSSYSSEGGTWSTDSPNRGSSWLVLRNLTPQIDGSTLRTLCMQHGPLITF
HLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEDDVNRFFAQGQSLTSTT
SWQASPAPGSNQPRLGNPAASHPTGLWSGGGGGTKTVCSTGNSSSGNRGDLLWGGVPQYS
RLWAPPNGDDTRVIGSPIPINTLLPGDLLSGESM
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagcaagaagaagagacaaagaaggatactgcacagaaaacggat
actgaacagaaaaccaaagtgccagactctgttaaacccaatcccagcatcccttcaagc
cccattctgaccctgaacctgcctgtaccctctactgccaccaccagcaatggcaagcgt
agcccttgtaattccctccaacagcatttacctccattacagcagcccagtccccgatac
gtgcccagagaggttcctccacgcttccgacagcaggagcagaggcagctactgaagagg
ggtcaacctttacctacaggcgctctgaacccgacctctgcttgcactcagtccggggtc
atctctcctcccgagacgcccaccagcaaacggcacacgggtcttccccatcaaagtgga
ctgggagcccagcatgagaattgtctttggagcatcccagtcagcaaaagcaacagcagc
aaccgggataaagtgatttttaactgtaacgacactgacacttggccttccaatacatac
ggcaagagccaccagacaccagaatgcaccttgaatgctgaacgcacatcagaggttgtc
agcaacagtagcagcactattatggctacaggagctagccagcagggtaattacccaatc
agcaaagccagcattaatctctcttctagtatggtctctagtcaaagtggccctaccagg
ggctgggtctcagagggaaaaattgacttgtccatgggcagtagagggcagtccaactgg
ggtgcctctaatctgaacctaaatcccagtgccaaccctgctgcttggccagcacttgga
catgagggtcctggggtagggtcaggccctagtagcatggtttgctcaaatccactttca
ctcagtatgtgtggccaaggaggaatggcaccacctcatggcaccaatggaaatggtagc
attggttgtgtcaatggaaaccttgtaggggactgtgcatggggcaacccggatgtccca
gaacagcatcagtcacccacaaatgtatctttcaacatgaaacctcctaaccttaaaatt
gatggaccaaataacagtaaaccagagccaatgagtccagtgaacagctggagaggaaac
ctcagtcagtcacctactgagcctgccagcgaagatggaactgccttctggggcaacggc
gatgccaaaaatggagaatctaaggactcaggctgggtttctgcaggcatctcctcttgg
gggcagagaggagctagcagtggtggtggctggggtgactggggcaaacaaccaagcact
gaaggtacaggatgggatgtaaatgatggtccttcccaggaccatatgagttcctggggc
cctgatactccagcaagtgagggcagcagagacagtagtgagggccacccaagaagaaga
gaaaggtcctcaagtgatgatttggcccctttgctcccaaggcaggacttggacccacgt
gtcctctgcaacacaggctggggacagactccagttcgccaacacactgtttgggaaatg
gaacaaagtccagacaaaaagaatggtgcagggactgaggtctgggggtcttcctccaac
acaccttcatctggacctgcaccacctcctcctggatgtgccagtcccaaccttagtgta
cctcctagaatggagacaagcaagagcgagggatcttgcagggccataccaaatgcaggc
tggggaggatcagtctcagcctcttctcagcctaacagtggatggggggaacctcctgca
aataaaaaggttcccaatggatcccagtgtggctggggtgatcctgttgctgaaggtccc
aataccagtggctgtaatggccaatcctgggctgaggaaaagtcccctagctgggatgat
ggtacttctcagaagaaaacacaaggttggggtaatggaaccaaaacttcctcaggctgg
ggaagtagtggcagtgggaatagtggagagtggagtgacccttcagaaatgcgaaagaat
gactctggaagttcctcttgggacactgacaacagaaactggaaagaaacacagagaggg
tggggtaaagcagaaccagcacagggtggtagttggggtgatgctcaacattccaatggt
tcagcccaaggttggggtggaaaacttcaggaatccacatgtgacaacggtggagctgga
ggcataggatcatggagtggcccaaattctgtgaaacagagcaactctggctgggcatca
gaagagcgacaggagccgggagatgaggccacaggctgggaagaaccctctccttattct
gttcgtcgcaaaatggaaattgatgatgggacctccacctggggtgaccccagtgcttac
agcaaaagtgtaaacatgtgggacaggaataactcccaaaatcatccaggaaccagcaac
agtggcaacagtaatagcctcactgggccaaacaacaatagcaagtcttaccaacaccac
agccaaggtcccactcagaaccatgtccgtggtagcaacaacaatggatcacccaatcaa
ggtgaatttcctctcaacagaatgcccgtggtgaacccaggctggggagagctccctaat
gtacagccaaactcagaaccctcttcatggggcgagccagccaattctaactcttcagtg
ggcagtggaacttcagcttggggccagccctctaggggctgtgggggatggggtgaaggt
ggccatgactccagtggaccttatggcagaggaaatgcacctgctggatcaggctcctgt
caggaaggtcccaaatctatgcaagatggctggggatcaggaggggaagagattggcatg
aacactggccaatgggatgctgatgatggtgacatgtggaacagtcctacatcccaagat
tcctcttgtaactcctggggtcaatccaagaagggcccacaaaggggcaaggtctccaac
aagcaggatgatgtttggattatgaccagacttatcaagcagcttacagatatgggtttt
ccaaaggatcctgcagaagaagccctaaagagcaacaatatgaatctggatcaggccatg
agcgctttgttggagaagaaaactgaactggacaaacgggggatgggcatgtcagactac
agtaatgggatgaataagcccatagtgtgccgacccacaaacctctccaaagacccctca
ctggatcgtgcccccttcctagacaaggacggtaggctgtcagatgatgcttcaacctca
ccgtttatgccttctcctggcctcaagctcccactggccaatagcagcctccctagccac
ggattgagtggggtctcctctggcctgtccatgcaaaacttgaacaacagacagatgcag
aatggaatgttcggcactaacggagcagcacaaactcgggtcatgcagcagcaggccctg
ccccctcagcaaccagtgccacctcttagctccacccagcctactctacgtgctcaagtg
cctcagcttctcacccctcaggttcaagcacagctattacagtttgcggcaaaaaacatt
ggactgaatcctgcacttttaacctcaccaataaatcctcaacaaatgaccctgctgtac
caactacaacaactgcaggcggcgtatcagcgtttgcagattcagcagcaaatgatgcag
gctcagcgtaacgtctctggtcccatcaaacaacaagagcagcaagttgcacgtacaatc
acaaacatgcagcagcagatccagcagcaccagcgtcagctggcccaggccctgcttatg
aaacagcaacagcctccaccttcctctcacactggcctgcacccaaatcttggcaaggca
agcctggatactttcacgggtcatcctcagacttcaggcctctccatttcagacctgcag
accaaagagcagcagtcttctccaaactacttcagcccttatacactctctggtttgaac
acgaacatgaatgtaaactgtatggaggtgggaagtctatctctcaaagacccccctcag
cctcaatcccggctctcgcagtggactcattcaaactccatagattccctgtcagctagc
gctcagcacatggaggcaaacctcaataagcatggttcaatttcttctgctcagtcccat
gttcctgtcggaaagagcaccatggaagattccttcagcccatacaatctaatgtcaagc
tctgaatcccccaccagcaccatggtgtctccagagagctggacacaaggcaaaagtccc
aatgagaaaatgtctagtaactccaatatcaactggcctcctgaattctgccctggggtg
ccatggaaaggtctgcagaacattgaccctgagaatgaccccaacatgaccccaggaagt
gttccaagtggccccaccattaacactaacatacaggatgtgaatcgctacctgttacgt
gacaggactggaggtaaactcttggaaatgaagtctacctggtcccctggacccatctcc
cacacacaggcctctttatctcatgagttatggaaggtttccccagggacacgtaactcc
agtgctccctcacgcccccctccaggcctgaccaacaccaagccctcctccacctgggga
ggaaactctcttggcctcagccagggctggaccagctcttactcctcagaagggggaact
tggagcactgacagtcccaacagaggaagcagctggctggtactgagaaacctcactcct
cagattgacggctccaccctgcgtactctgtgcatgcagcacggccctctcattaccttc
catctgaacctgacgcagggcaatgctgttgtacgttacagctccaaggaggaggctgcc
aaagctcaaaaatccctgcacatgtgtgtgctgggtaacactaccatcctggcagagttt
gccggtgaggacgatgtgaaccgcttctttgcacagggccagtctcttacctccaccacc
agctggcaggccagcccagcaccaggctccaatcaaccccggctgggcaaccctgctgcc
agccaccccacaggcctttggagcgggggtggaggaggtaccaagacagtctgcagtacc
gggaacagcagcagtggaaacagaggcgacctgctgtggggaggtgtgccacagtactcc
agattgtgggctcccccaaatggagacgacaccagggtaatcggcagccccatcccaatt
aacactctgctcccaggagacctgctgagcggagagagcatgtag
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integrated database retrieval system
