Sinocyclocheilus grahami (golden-line barbel): 107566746
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Entry
107566746 CDS
T04918
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107566746 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107566746 (prpf40a)
Spliceosome [BR:
sgh03041
]
Complex A
U1 snRNP components
U1 related factors
107566746 (prpf40a)
Complex B
107566746 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
107566746
NCBI-ProteinID:
XP_016107759
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MSSTDANSGPSQAPPFPGVPPAGIPPPFMGPPGIPPHFPPMGMPPMGQRPPSMAPMPPGI
MPPMIPPMGAPPIGQMPAMMPPMMPGMMMPPRMPAASIQPTGPPGVSPVESAAPAAPGTT
STTSTESSPDEQSKKKSVWTEHKSLDGKTYYYNTDTKQSTWEKPDELKSPAEQMLSKCPW
KEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTVDVVAPGTTPALTSQSES
SVTVAAVAETEATMATVATEEQPSHVPAPVAEVSSDVTVNSTEETPSVETQPCNDVSKEE
RPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFGDQEVWSCV
PERDRQEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGLLVEVNTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKSMLKQATPPLEPEATWEGVRERFLKEPAFEDITLESERKRIFKDFMHV
LEHECQHHHSKTKKHAKKSKKHHRKRSRSRSGSESEDDEYHSKKKKLSASKSPSEHSSSG
ESERSYKKSKKHKKKGKKRRHKSASPESEGEKERKGREKEKDKENDKSRGKSRGESKQKS
PKRKSTKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgactgatgctaatagtggcccaagtcaagcaccaccttttcctggtgtacca
cctgcaggaatccccccgccctttatggggccaccaggaatcccgcctcacttccctcca
atgggaatgccacccatgggccagaggccgcccagcatggcccccatgcccccgggaata
atgccccccatgatccccccgatgggagctccacccataggacagatgccagccatgatg
ccaccaatgatgccagggatgatgatgcccccccgtatgccagctgcatcaatccagcct
acaggaccgcctggtgtgagtccagtggagtctgcagcaccggctgctcctggaacaacc
agcactacatcaactgagtcttcgcctgatgaacagtcgaaaaagaagtcagtatggacc
gagcacaaatccctggatggaaaaacatattactacaacaccgataccaaacaatccacc
tgggagaaaccagatgaactcaaatcacctgcagagcaaatgttgtccaaatgcccatgg
aaagagtataagtcagacaccggcaagccctattactacaactcccagaccaaagagtct
cgctggactaaacccaaagaactggaggacctggaggcgatgataaaggcggaggaaaac
gggacggttgatgttgtggctcctggcaccacccctgctcttacatctcaaagcgagtcc
tctgttaccgtggcagcagttgctgagacagaggctaccatggcgacagtcgccacagag
gaacagccgtctcacgtgcctgcaccggttgctgaggtcagcagtgatgtcacagttaac
tccactgaggaaacgccgagcgtagagacacaaccctgtaatgatgtttctaaggaggag
agacctgagctggtgaagaaagtttacaagtggaacacaaaagaggaggcaaagcaggca
tttaaagaactgctgaaagaaaagggcgtttcctccaatgcgtcatgggagcaggcaatg
aagctgataattaacgaccctcgttacagtgctctgcccaagctaagtgaaaagaaacag
gcattcaatgcttataaagtccagacagagaaagaggaaaaggaagaagcccgaatcaaa
tacaaggagtctaaagagactttccagcgcttcctggagaaccatgagaagatgacctca
accacacgatacaagaaagcggagcagatgtttggcgatcaggaggtgtggtcatgtgtt
cccgagagagacaggcaggagatctatgaagatgtgctgttttatttagcaaagaaagag
aaggaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacattttggac
aatatggccaatgtgacatacagaactacgtggtctgaggcacagcagtacctgctggat
aaccccacctttgctgaagatgaggagctgcagaacatggacaaagaagatgctctgatc
tgtttcgaggaacacatccgtgctcttgagaaagaggaggaggaagagaaacagaaaact
ctgctgcgagagagacgcagacagcgcaaaaacagagagtctttccagaaattcctggat
gagcttcatgatcacgggcagctgcactccatgtctgcctggatggagatgtacccaacc
gtcagcgccgatatccgcttcaacaacatgctgggccagccaggctccacccctctggac
ttattcaagttttacgtggaggatctgaaagctcgttatcatgatgagaagagaatcatt
aaagacatcctgaaggataagggcttactggtggaggtcaacacaggctttgaggagttt
ggctcagtgatcagttcagataaacgggccaccacgctggatgcaggaaacatcaaactg
gccttcaacagtttgctggagaaggctgaagcacgtgagcgggagagagagaaggaggag
gccaggaagatgaagcggaaggaggcggcgtttaagagcatgctgaaacaggccacaccc
cctctagagcctgaggccacatgggagggagtgcgagagcggttcctaaaagagcctgcg
tttgaggacatcacgctggagtccgagaggaagaggatattcaaagacttcatgcacgtg
ctagagcacgagtgtcaacatcatcattcaaagactaagaaacatgccaagaaatccaag
aaacaccacagaaaacgttcccgatctcgatcaggctcggagtcagaggatgatgagtat
cactcgaagaagaagaaactctctgcatctaaatctccatccgagcactcgtcttctggg
gagtctgagaggagttacaagaaatctaagaaacacaagaagaagggaaagaaaagacga
cacaaatcggcctcccctgagtctgaaggagagaaagagcggaaaggaagagagaaagag
aaggataaagagaacgacaaatccagagggaagtcacgtggagaatccaaacagaagtcc
cccaaaagaaagagtacaaaagaagagggtggatgggatacgtccggaagcgaactgagt
gaaggagagctggaaaagaggaggcgcactcttctggagcagctggatgcaccataa
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