KEGG   Sinocyclocheilus grahami (golden-line barbel): 107566907
Entry
107566907         CDS       T04918                                 
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107566907 (prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107566907 (prpf4)
Spliceosome [BR:sgh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    107566907 (prpf4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PRP4 NBCH_WD40 eIF2A Ge1_WD40 WD40_like
Other DBs
NCBI-GeneID: 107566907
NCBI-ProteinID: XP_016107961
UniProt: A0A672LYW5
LinkDB
Position
Unknown
AA seq 507 aa
MSDEDEVPVVKKARIFYGSLEEKEKQRLSREGISTSAKDAVKAGIEAGHINISSGESMEM
EERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDEKAKRTQDEYQQTWYHEGPSSLKEARIWLAKYSLPRAVERLDA
ARAQKEIPESTRTVKQQELHKTLRNVNNFCSQIGDDRPISHCQFSPNSKLLVTASWSGLC
KLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEP
VADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDAFARVWDLRTGRCIMFLEGHHNEIYSINFSPNGFHVATGSGDNTCKVWD
LRHRRCMYTIPAHENLVSSVKFQPNDGHFLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDLSPDGQLIATCSYDRTFKLWMAE
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgtcggatgaagacgaagttccagttgtgaaaaaggccaggatcttctatggaagcctt
gaagaaaaggagaagcagcgtctcagccgtgaaggaatatctacctctgctaaagatgct
gttaaagctggcattgaggctggacatattaatatctccagtggtgagtcgatggagatg
gaggagcgtgtgagtgagcgacaggctgaagtgctggcagaatttgagcgtagaaagcga
gcgagacaaatcacggtctctactgatgatgtagaggtcaaggcctgcctccgagctctt
ggcgagccaatcacgctgtttggggaggggcctgcagagagacgagagagattgaggaac
attctttcagtagttggtcctgatgccttgaagaaatcaaagaaagaggatgaaaaagca
aaacggactcaagatgagtatcagcagacatggtaccatgaaggaccttcgtctctaaaa
gaggcgcgtatttggttagccaagtattccctacccagagcagtggaaaggttagatgct
gcaagggcacaaaaagagattccagagtctacgagaacagttaaacagcaagagcttcac
aagaccctacggaatgtgaataacttctgcagccaaattggtgatgaccgtccaatatct
cactgccagtttagccccaactctaagttgcttgtgactgcatcatggagtggcttgtgt
aaattgtggaaagttccagattgtacacttatacgcacattaagaggtcacaataccaat
gtgggagcgattagctttcaccctcaagccacactcacacttgaggagtcagatgtcaat
atggcctcctgtgctgcggatggatctgttaagctgtggagtttagacagtgatgagcct
gtagcagacattgaggggcactctatgagggtggctcgggtggcctggcatccctctggg
cggttcctaggaacaacttgctatgataactcatggcgactttgggatcttgaagcccaa
gaagaaattctgcatcaggagggtcatagtaaaggtgtccatgacctgcacttccaccca
gatggctctctggcaggaactggtggtttggatgcatttgctcgtgtctgggacctgcgg
actggtcgttgtatcatgttcctggaaggccaccacaatgagatttatagcatcaatttc
tcaccaaacggctttcacgtggcaacaggaagtggagataacacctgtaaagtgtgggac
cttcgtcatagaaggtgtatgtacacaattcctgcccatgagaaccttgtgtcttcagtc
aagttccaacctaacgatgggcattttttgctgactggtgcatatgacaacacagccaaa
gtgtggacccatcctggctggtcacctctgaagactctggcgggtcatgaagggaaggtc
atggggcttgacctttcgcctgatggacagctcattgccacctgctcttatgaccgaacc
ttcaaactctggatggcggaatga

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