Sinocyclocheilus grahami (golden-line barbel): 107566907
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Entry
107566907 CDS
T04918
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107566907 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107566907 (prpf4)
Spliceosome [BR:
sgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107566907 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
eIF2A
Ge1_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
107566907
NCBI-ProteinID:
XP_016107961
UniProt:
A0A672LYW5
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDEDEVPVVKKARIFYGSLEEKEKQRLSREGISTSAKDAVKAGIEAGHINISSGESMEM
EERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDEKAKRTQDEYQQTWYHEGPSSLKEARIWLAKYSLPRAVERLDA
ARAQKEIPESTRTVKQQELHKTLRNVNNFCSQIGDDRPISHCQFSPNSKLLVTASWSGLC
KLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEP
VADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDAFARVWDLRTGRCIMFLEGHHNEIYSINFSPNGFHVATGSGDNTCKVWD
LRHRRCMYTIPAHENLVSSVKFQPNDGHFLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDLSPDGQLIATCSYDRTFKLWMAE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaagacgaagttccagttgtgaaaaaggccaggatcttctatggaagcctt
gaagaaaaggagaagcagcgtctcagccgtgaaggaatatctacctctgctaaagatgct
gttaaagctggcattgaggctggacatattaatatctccagtggtgagtcgatggagatg
gaggagcgtgtgagtgagcgacaggctgaagtgctggcagaatttgagcgtagaaagcga
gcgagacaaatcacggtctctactgatgatgtagaggtcaaggcctgcctccgagctctt
ggcgagccaatcacgctgtttggggaggggcctgcagagagacgagagagattgaggaac
attctttcagtagttggtcctgatgccttgaagaaatcaaagaaagaggatgaaaaagca
aaacggactcaagatgagtatcagcagacatggtaccatgaaggaccttcgtctctaaaa
gaggcgcgtatttggttagccaagtattccctacccagagcagtggaaaggttagatgct
gcaagggcacaaaaagagattccagagtctacgagaacagttaaacagcaagagcttcac
aagaccctacggaatgtgaataacttctgcagccaaattggtgatgaccgtccaatatct
cactgccagtttagccccaactctaagttgcttgtgactgcatcatggagtggcttgtgt
aaattgtggaaagttccagattgtacacttatacgcacattaagaggtcacaataccaat
gtgggagcgattagctttcaccctcaagccacactcacacttgaggagtcagatgtcaat
atggcctcctgtgctgcggatggatctgttaagctgtggagtttagacagtgatgagcct
gtagcagacattgaggggcactctatgagggtggctcgggtggcctggcatccctctggg
cggttcctaggaacaacttgctatgataactcatggcgactttgggatcttgaagcccaa
gaagaaattctgcatcaggagggtcatagtaaaggtgtccatgacctgcacttccaccca
gatggctctctggcaggaactggtggtttggatgcatttgctcgtgtctgggacctgcgg
actggtcgttgtatcatgttcctggaaggccaccacaatgagatttatagcatcaatttc
tcaccaaacggctttcacgtggcaacaggaagtggagataacacctgtaaagtgtgggac
cttcgtcatagaaggtgtatgtacacaattcctgcccatgagaaccttgtgtcttcagtc
aagttccaacctaacgatgggcattttttgctgactggtgcatatgacaacacagccaaa
gtgtggacccatcctggctggtcacctctgaagactctggcgggtcatgaagggaaggtc
atggggcttgacctttcgcctgatggacagctcattgccacctgctcttatgaccgaacc
ttcaaactctggatggcggaatga
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