Sinocyclocheilus grahami (golden-line barbel): 107566918
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Entry
107566918 CDS
T04918
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03271
Virion - Rotavirus
sgh04145
Phagocytosis
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
sgh04518
Integrin signaling
sgh04530
Tight junction
sgh04810
Regulation of actin cytoskeleton
sgh04820
Cytoskeleton in muscle cells
sgh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
107566918
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107566918
04514 Cell adhesion molecule (CAM) interaction
107566918
04517 IgSF CAM signaling
107566918
04518 Integrin signaling
107566918
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107566918
09144 Cellular community - eukaryotes
04510 Focal adhesion
107566918
04530 Tight junction
107566918
09142 Cell motility
04820 Cytoskeleton in muscle cells
107566918
04810 Regulation of actin cytoskeleton
107566918
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107566918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107566918
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107566918
04515 Cell adhesion molecules [BR:
sgh04515
]
107566918
04090 CD molecules [BR:
sgh04090
]
107566918
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107566918
Exosome [BR:
sgh04147
]
Exosomal proteins
Proteins found in most exosomes
107566918
Cell adhesion molecules [BR:
sgh04515
]
Integrins
Integrin beta subunits
107566918
CD molecules [BR:
sgh04090
]
Proteins
107566918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
107566918
NCBI-ProteinID:
XP_016107976
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDLKLLFITLLGIICCSSAQQEGNECIKANALSCGECIQVGAKCGWCTDTQEFLKQGEPT
SARCDELESLRKRGCDKIENPHGSQRILKNKAVTNRKKGAEKLRPEDITQIQPQKLSLNL
RSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFRIG
FGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNSLVGKQQISG
NLDSPEGGFDAIMQVAVCGEHIGWRNVTRLMVFSTDAGFHFAGDGKLGGIVLPNDGKCHL
ENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSAN
SSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVNEGENGRKCSNISIGDE
VSFNINITAQGCSKQVKPESIKIKPLGFTEEVEILLNFICECECHKHGIKNSDMCHNGNG
TFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKKRD
NPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDASTCLAS
NKQICNGRGICECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDTCE
RDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNTEKEVHVVEALEC
PAGPDIIPIVAGVVTGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTENPIY
KSPINKFKNPNYGRKAVAL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctacttttcataacattattagggatcatttgttgcagcagcgcacag
caagagggcaacgagtgcatcaaagccaacgctttatcctgtggcgagtgcatacaagtg
ggggctaaatgtggatggtgcactgatacacaggagtttctgaagcagggcgagccgacg
tcggcgcgctgtgatgagctggagtcgctcagaaagagaggctgcgacaagatcgagaac
cctcacgggagccaaaggatcctcaagaacaaagccgtgaccaaccgcaagaaaggagca
gagaaactccgacccgaggacattacacagatccagcctcagaaactcagcctcaacctc
agatccggggaacctcagaatatcaaactgaagttcaagagggctgaagactatcccata
gacctgtactacctgatggacctgtcctactccatgaaggatgacttggagaacgtcaag
aacctagggactagtctgatgaaggaaatgtccaagatcacctcagatttcagaataggt
tttggctcttttgtggagaagacggtgatgccgtatatcagcacgactccagccaagctc
ctgaacccctgcacaggggaccaaaactgcaccagccccttcagctacaagaacgtgctg
aaactcaccagcaacggggagcagttcaacagtctggtgggaaaacagcagatatctggc
aacctggactcacccgagggggggtttgatgccatcatgcaagtggctgtctgtggagag
cacatcggctggagaaacgtcactcgtttgatggtgttctccacagacgcaggtttccat
tttgccggcgatggcaaactaggtggaatcgtgcttcccaatgatgggaaatgccactta
gaaaacaacgtgtacaccatgagccattattacgattacccatccatcgcccacctggtt
cagaaactgagcgaaaacaacatccagaccatctttgcagttacagaggagtttcagcct
gtttacaaagaacttaaaaacctgatcccgaagtctgcagtggggacgctctctgcaaac
tccagcaatgttatcaatctcattgttgatgcctacaattctctttcttcagaggtgatc
cttgagaacagtaagcttcctgaaggagtgaccatcacctatcagtcgcgctgtaagaac
ggagtggtgaatgagggagagaacggaagaaagtgctctaacatctccatcggagacgag
gtatcgttcaacattaacatcacggctcaaggctgctccaaacaagtcaaacctgaaagc
attaagatcaagcccctgggcttcactgaggaggtggagatcttgctcaacttcatctgc
gagtgtgaatgtcacaagcacggcatcaagaacagtgacatgtgtcataacggcaacggc
acgtttgagtgtggagcctgcaggtgcaataagggacgtgtgggcaggcagtgtgaatgc
cgaaaagacgaggtgtccaccgaagacctggacaagaactgccgcaaggacaacggcacg
gacatctgcagcaataacggcgagtgcgtgtgtggcacctgcgagtgcaagaagagggac
aatcctgaagagcgctacagcggcaaattctgcgagtgtgacaacttcaactgcgaccgc
tccaataataaactctgcggaggacacggccgctgtgagtgcagggtgtgtatctgtgac
gctaactacacgggaagcgcgtgcgactgctctctggacgcctccacctgcttagcctcc
aacaagcagatctgtaacggccgggggatctgtgagtgcgggacctgcaggtgcaccgac
cccaagttccaggggcccacctgtgagatctgccccacctgccccggagtctgtactgag
cacaaggagtgtgtgcagtgccgggcgtttggcacaggagagaagaaagacacttgtgag
agagactgtagctacttcaacctcatcaaggtgaaggacagagataaactccctcagccg
gtgcaggccttccccctcatgcactgcaaggagagagacgccaacgactgctggttctac
tacacctacgccgtcaacaacacggagaaggaggtgcatgtggtggaggctttagagtgt
ccggcgggtcctgacatcattcccatcgtagcgggcgtggtcacaggcatcgttctgatt
ggtctagctctgctcctgatctggaagctgctcatgatcattcacgaccgccgcgagttc
gccaagtttgagaaggagaagatgaacgccaagtgggacacgacagagaatccaatttac
aagagccctattaataaattcaagaacccaaactatggacgtaaagctgtggctctataa
DBGET
integrated database retrieval system
