Sinocyclocheilus grahami (golden-line barbel): 107566942
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Entry
107566942 CDS
T04918
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107566942 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107566942 (utp18)
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107566942 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_VPS8
DUF7165
Beta-prop_SPT8
eIF2A
KNTC1_N
Beta-prop_NWD2_C
Beta-prop_TEP1_C
Phage_TAC_19
Motif
Other DBs
NCBI-GeneID:
107566942
NCBI-ProteinID:
XP_016108003
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MDSSESAAGKQRKSAKRPPSEDAGAAEERLKQKKHSALCATLGGEDASVRLLEELVFGAE
ERLSERLAQDSSVLLEDDDTHSVGSEDCGSERPAVRSAVWEDEDDELDEEVDMTHRFRRD
FKKSEAENKMTKPRLQQRLKEQFQKAMGGTPSWAEVTAKRSQKKAEPETEDEDESEELLR
RTGNFIGSSDSLPKGIIKIKKCLNANSECPGGDQLSSVQFHPSAQIVMTAGLDHSVSLFQ
VDGKSNPKIQTIHLENYPVNKASFSADGEHIVATGMRNKLFYIYDMMEGKVIPVLSVRGL
NEQRVSDFQVSPDGKYLLLSGSSGYLHLMTTKTREVIRSMKMNGSVCAAAFTSDSSKIFA
NSQEGEVFIWDVQSSKCLKKFADDGCIRGTSLALSRDGLYLACGSQSGVVNIYSQKDCLH
TLEPRPLKAVMNLVTAATSLCFNSTSEILSIGSRADDEANRLVHLPSFTVFSNFPQFQKK
TIFRTRCLDFSPQSGFYTVANNKGHALLFR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtctgaatctgccgctggaaagcaaagaaagagcgcgaaaaggcctccgagc
gaggacgcgggcgcggcggaggagcgtctgaagcagaagaagcactcggcgctgtgcgcg
acgctcggcggggaggacgcgtccgtcaggctgctggaggagctggtgttcggcgcggag
gagcggctgagcgagcggctggcgcaggacagcagcgtgctactggaggatgacgacaca
cacagcgtcggctccgaggactgcggctccgagcggcccgccgtcaggagcgcagtgtgg
gaggatgaggacgatgagctggatgaagaggttgacatgacgcatcggtttcgcagagac
tttaaaaagagtgaagcagagaataaaatgacaaaaccgaggctgcagcagcgcttaaag
gagcagtttcagaaagccatgggcggcacacccagctgggcagaagtgaccgcaaagagg
agtcagaagaaagcagagcctgagactgaagatgaggatgaaagtgaagaactgttgcgc
aggactggtaacttcatcggctcgtctgacagcctgccgaagggaatcatcaagataaag
aagtgcttgaatgcgaacagtgagtgtcccggcggtgatcagctgagctccgtgcagttt
cacccgtctgctcagatcgtgatgaccgcagggctggatcactccgtatcactctttcag
gttgatggcaagagcaacccaaagatccagaccatccatctggagaattatcccgtgaat
aaggcttcgttcagtgccgatggggagcatatagtggcgactggaatgaggaacaagctc
ttctacatctatgacatgatggaaggcaaggttatccctgtattgagtgtcagaggtctg
aatgagcagagggtgtcagactttcaggtttctccagatgggaagtatcttctcctctct
ggttcttcaggatatctccacctcatgaccacgaagacccgagaagtgatccgaagcatg
aagatgaatggcagtgtgtgcgctgcagctttcacctcagacagcagcaagatctttgcc
aactcccaggaaggtgaggtgttcatctgggatgtgcagagcagtaaatgtctgaagaaa
tttgcggatgacggctgtatcagaggaacgtctcttgcgctgtcccgggacggcctgtat
ctggcctgtgggtctcagagtggtgtggtgaacatctactcccagaaggactgtctgcac
acgctggagcccagacctctgaaggccgtcatgaacctggtgacagcagccacctctctg
tgcttcaacagcacctccgagatcctgtccatcggatccagagcggatgacgaggccaac
cggctggtccatcttccaagtttcacagtgttctccaattttccacaattccaaaagaaa
accatatttcgaacccggtgtctggatttctccccacagagtggattctacactgtggcc
aataataaaggccatgcgctgctcttcaggtga
DBGET
integrated database retrieval system
