Sinocyclocheilus grahami (golden-line barbel): 107567305
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Entry
107567305 CDS
T04918
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107567305
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107567305
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107567305
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107567305
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107567305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
TMEM154
RibLong
DUF6249
Prominin
Motif
Other DBs
NCBI-GeneID:
107567305
NCBI-ProteinID:
XP_016108453
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MDLASEAHVLVVLLTCLFLMCRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDIKLSSA
LQFKPVYKTGDVPLVKVEASTGEIFTTANRIDREKLCSGVFTEKRCFYEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGTPPKSSTAILQVTVS
DVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPATKRHF
AIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSIPSRATVTVNVTDINDNVPSIDTRYI
MNLVNGTVLLSENAPLNTKIALITVTDKDADLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYETIREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENND
PGTQLIKISATDVDSGSNALIIYSLGQDAPDGFNIDPRSGILSVVKRLDREKQEKYSFTV
IARDNGSTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGQMQTTSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVPSTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSP
RGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALVHLFVNDTVSNAT
FIQEQLRKSLETPLERNIGDNEVTPQTNGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKSKQSGEWVSPNQEGRQIKKKKKKKKRSPKSLLLNFVTIEEPKNDDPTHEHING
TLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGQIHTRQNQSQTPDKTFP
VVLATCPHKQTQRRVTFHLPDGSQESCSDSGLGEQEPNSGASTTQPLPLGFPQEEYYEQT
SPNSRTEGDGNSDPESSKY
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcaagtgaggcccatgttctggtggttttactcacctgcctgttcttgatg
tgccgggctcaagagaaggactacaccgtaaaagaggagcagccggagaatgtgcgcatc
ggaaacctgcgcaaagacctaaacttgaacctagatccagacattaaactgtcttctgcg
ctgcagtttaaacctgtctacaagacgggtgatgtgcctttggtcaaggtagaagcaagc
acgggagagattttcaccacagccaaccgcatcgaccgtgagaaactctgttccggagtc
ttcaccgagaagcgctgcttttacgagatcgaggtcgccgtgctacccgacgagattttc
cgactggtcaagatccgcttcctcatcgaagacatcaatgacaacgccccgctctttcag
tcgacggttatcaacatctccattccagaaaacacggccatcaacagccgctaccctgtc
ccttccgcatttgaccctgatatagggatcaatgggattcaacactacgagcttgtcaag
agtgtgagtgaatttggcctggacatcatcgagacgcctgaaggagacaaatggccccaa
ctcatagtccagcagagcctcgatcgggaaacgaaggacacctttgtgatgaaaattaaa
gtagaggatggtggcacccctccaaagtccagcacagccattctgcaggtcaccgtctca
gatgtgaatgacaatcggccggtgttcaaggacagcgaggtggaggtaaacgttcctgag
aatgccccaatgggaacatctgtcacacaccttcatgccacagatgctgatctgggatcc
aatgctcagattcacttctccttcagcaaccaaatttcccctgccaccaaacgacatttt
gctattgacagcacaactggactgattaccgtcaagcagccattggacagggaagtcaac
ccggtgcacaagcttatagtgctggccagtgacggaagctctatcccttcaagggctaca
gtgacagtcaatgttacagacattaatgacaacgtcccctctattgatacccgttatata
atgaatctcgttaatggcactgtgctgttgtctgaaaatgcaccccttaacacaaaaata
gccctaattactgtgactgacaaagatgcggatctgaacggtaaagttacttgttacact
gatcatgatgtacctttccgactgaagccggtcttcaatgaccagtttttgctcgagacc
gccgcacccttagattacgagaccattcgagagtatgcaattaggatagttgcatctgac
tctgggaaaccacctctgaacacttcggcaatggtcctgattaaaataaaggatgagaat
gacaatgtcccagttttccctcagcctgaaatccagctgtccattccagaaaacaatgac
ccgggcacacagttgataaaaatcagtgcaacagatgtagatagtggttctaatgccctt
attatttatagtcttggccaagatgctcctgatggatttaacatagatccccgttctgga
atcctttccgttgtcaaaaggctggatagagagaagcaggagaagtattcattcacagtc
attgccagggataatggttctacccctctccaaagcaacgtcactgtcaagctaatagtc
caagaccaaaatgacaacagtccagcctttacccatcccgagtacaacttttatgtgcct
gagaacctgcctttgtatgggacggtgggtttgatcactgtcacggatgcagatgctggt
gacaatgcagtcgtcactctctcgatcataaatgggaaggacaatttcattatcgacccc
aaaaccggggtgatcaaaccaaacattacctttgacagggagcaacaaagttcctacacg
tttgttgtcaaggctgtggacgcaggtcaaatgcaaaccacctcctatgccaaggtcacc
ataaatgttgttgatgtgaatgacaatcgaccggtgtttgtcatcccctcctcaaactac
tcctatgatctagtaccttcaaccaccagccctggttcagtggtgaccagagtatttgcc
attgacaatgacactggaatgaacgctgagctgcagtatagtattattggagggtcaccg
agaggactgtttgccattgacaaaacgacaggcaacattactctgcaggagaagattgta
gcagcagaccaaggacttcataggctagttgtaaaggtcaaggacttgggacagcctgag
tccttacacgcaatcgcccttgttcatttgtttgtgaatgataccgtctccaatgccaca
ttcatccaggaacaacttcgcaagagtttggagactcctttggaacggaacattggggac
aatgaggtgacaccccagaccaatggctacgtaattgttgttattgccataatagctggg
actatgacggttatcctggtgatctttgtgactgctttggtacgctgccgacagacaccg
agacacaaagttgtccagaagagcaagcagagcggcgagtgggtatcacccaaccaggag
ggtcggcagattaaaaagaaaaagaagaagaagaagagatccccaaaaagtttgctgctg
aatttcgtaaccattgaggaacccaagaacgatgaccctactcatgagcacatcaatggc
accttagatctccctgttgaacttgaggagcagacaatgggaaagtacaactgggctacc
acaccaactaccttcaaacccgacagtcctgacttagccaagcactacaaatccgcttcc
cctcagccaacattccagatcaaaccagagacccctgtggctcccaagaagcatcatgtc
attcaggaactcccactggacaacacattcgtggtgggctgtgactcactctccaaatgt
tcctccagcagctccgacccctacagcgtttcagagtgcagttgtcaaggaggcttcaag
gcacctggacaaatccacaccagacagaaccagagccagactccagataaaacattccct
gttgtcctagccacgtgcccccacaagcagacgcaacgccgcgtgacctttcacctcccg
gacggctctcaggagagctgcagtgacagcgggcttggagagcaggagcccaatagcggt
gccagcaccacccagcctctgcccttgggcttccctcaggaagagtactatgaacagacc
tcaccgaacagccgcactgagggtgacggcaactctgaccccgagtccagtaagtactga
DBGET
integrated database retrieval system
