Sinocyclocheilus grahami (golden-line barbel): 107567931
Help
Entry
107567931 CDS
T04918
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sgh01001
]
107567931
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sgh04054
]
107567931
Enzymes [BR:
sgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107567931
Protein kinases [BR:
sgh01001
]
Serine/threonine kinases: Other
TAF1 family
107567931
Pattern recognition receptors [BR:
sgh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107567931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
AAA_25
TsaE
Pox_A32
LRR_8
DO-GTPase2
ABC_tran
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
107567931
NCBI-ProteinID:
XP_016109222
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MSLSHGCCPVMVPFEEVLFQVRKALQVSPILLHELLRELHEANVFSTQYYQSLYKDGEIG
EQRLCEVFCNDGEDLARRLSLPIWQNWDICQSILDLALSKEEDLVPSADAEWQDIVSDLM
SELLPDNVILKYLESPESIEDDFDPTVLDNFPGDTDITCTPVPENTTFLDGVPPKKPKIV
HKRRRKRSNSTGNRKATVCPESPSNRCTPTITPESSFSLSSNPFQHVLRIPFSPPLLPPS
GGSPLQIIQTIGPYTPPLFGTVVPTGPTYVIVSPQCVSPGTQIIPLSPAIGTVAPPELTG
SVLPVGSSSDSACQGSPTVDTLSPTKDLQKNNDSTSPKTEKKIRPEAPECVKDYIHHIKS
YMRDVCCSMRGGMGMESHYVDAHLVQRKLLIKSGKNANKCLEKELVVLSDSERKKAKLDR
SQLFHNSDSKPKQSVALLGKAGAGKTTFIQRLCLDWASGSLPQFQFVFLLNCKILDLTKS
TYSLKGLLFDLSMSPRCEDSDSVFKHILSCPDEVLIIFDSFDHIKDFEGLLQSPAKSHTN
TKYTIKQLFSGLFQKEILSGCTLLIATRPKDVLNQVLRKMDSLLELCGFSPEDIELYTSK
YFGDASLQENALKQIKTDRYIFSLCSNPLLCWTTCFLLEHQESCNDLPSTLTDLYQRATS
KHLQLASLENSSLCKNRKQLDIPQLCKMAWEGFKNHDTHVNPGSSTELLDCALKSGILAS
YKTSEGQENHFADLFTQNLLSAVHLVQSKQVNEKMVVANSVVHQKKRKVQGESQDVLQRF
VTGLVFQKAPDGVSILDSSVNIKAKRKAVETHLESMKPSDLVPARLLELFHCVYETSSAK
FAKLLLKNLPDNLSFYGMQLCPSDVYVICHLLRYASTLKRTFSINLQDACIPISGLKELV
GLKCIKAFWAHTADTIGLWEDLHQSNDELNLKSAIEKFTLHPFKATEGYHIESLPVLVQI
HREKKLPMSELVSALDKGVPALRHLQRLEFELGVQNGPELFPKLVEVLPSLQSLQHLDLE
KNQIGDSGAEKLAGVLHFLECLKLLNLSQNLIGDAGVEKLAKALASVPSLQSLSLYGNAI
ADIGAEHLALALPDMNFLQDLNVAFNKFTDLGATKLGAALKNCTGMKSLELWNDCIPYGV
FEHLRLQDPRIRSL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtctcacggctgctgtccagtcatggttccatttgaggaggtactgtttcag
gtgagaaaagctttacaggtcagccctatcctactgcacgagcttctcagagagctgcat
gaggccaacgtcttctctacccagtattaccagtctctctacaaggatggggaaattgga
gagcagcgtttatgtgaagtcttttgtaacgatggagaagatctggccagaagactctct
ttgcctatctggcaaaactgggacatctgccaaagcatcttggatttggcactctccaaa
gaggaagatttggttccttctgcagatgctgaatggcaagatatcgtctcagacttaatg
tctgaactcttacctgataatgtcatcttaaaatatctcgagtcaccggagtctattgaa
gatgatttcgatcccaccgtccttgataactttccaggtgacacagacataacctgcacg
ccagtaccagaaaatactactttcctagatggagtgccacccaaaaagcccaaaattgta
cacaaacgccgcagaaaacgcagcaattcaactggtaatagaaaagcaacagtgtgccct
gaaagtccctcaaacagatgtacgcccaccattacccctgagagtagtttcagtctcagc
tcaaacccattccagcatgtattacgtattcccttcagcccccctcttctgccccctagt
ggaggttcaccactacaaatcatccagacaatcggcccttatacgccgcctctattcggc
actgtggttccaacagggcctacatacgtgattgtgtcgccccagtgtgtgagtccaggc
actcagataattcctctttcacctgccattggcacagttgccccgccagaactcactggt
tctgtacttcctgttggctcatcctcagacagcgcatgccagggttcgccaacagtagac
acactctcccctacaaaagacctacaaaaaaacaatgattccacatctccaaaaaccgaa
aagaaaatccgcccagaagcaccagaatgtgttaaggactacatacatcacataaaatcc
tacatgagagatgtctgctgctcaatgcgtgggggaatgggaatggagtcacactacgtg
gacgcgcatctggtccagagaaaactccttatcaaatccggcaagaatgcaaacaagtgt
ctggagaaagaactggtcgtcctaagtgattcagagcgaaagaaagcaaagctggacaga
agccagttgtttcataacagtgattccaaaccaaaacagtcagtcgctctccttggaaaa
gccggagcggggaaaaccacgttcattcagcgtttatgcttggactgggcgagcggcagc
ctgcctcaatttcagtttgtttttttgttgaactgtaaaattttagacctcacaaaatca
acctacagcttgaaaggtttactgttcgatttgtctatgtctcctcgctgcgaggactca
gattctgtgttcaaacacattctgtcctgccctgatgaagttctcatcatcttcgacagc
tttgatcacattaaagactttgaagggcttctccagtcccctgctaaatcacacacaaac
actaaatacacaatcaaacagctattttccggtttgttccaaaaggaaatcctctcaggc
tgcacgcttcttatcgccacgaggcctaaagacgttttaaatcaggtgctgcgaaaaatg
gacagccttttggagctttgtggcttctctcctgaggacattgagttgtatacatcaaaa
tatttcggggacgcttccctccaagaaaatgcactaaaacagattaagactgacagatac
atattcagtttatgctccaacccgctactttgttggactacctgcttcctgcttgagcac
caagaaagctgcaatgatttgccttcaaccctcacggatttgtaccaaagagcgacctca
aaacatcttcaactagctagccttgaaaatagctcattgtgtaaaaacagaaaacagctg
gacatcccacaattgtgcaaaatggcatgggagggattcaagaatcacgatacacatgta
aaccctggcagttctacggagctgctggactgcgctcttaaaagtggcatacttgcatcc
tacaaaacatctgagggtcaggaaaaccactttgcagaccttttcacccagaacctcctg
agcgctgtgcatctggtacagtctaaacaggtgaacgaaaaaatggtggtggcaaacagc
gtagtccatcagaagaaacgaaaggttcagggagagtcacaggacgtgctgcagaggttt
gtcacgggcttggtcttccagaaggcccctgatggagtcagcatcctggacagcagtgtc
aacataaaagccaaaagaaaggctgtcgaaacccatctggagagcatgaagcctagtgat
ttggttcctgccaggttactagaactgtttcattgtgtttacgagaccagcagcgccaaa
tttgccaaactgctgttgaagaacctgcctgacaacctgtcattctatgggatgcagctt
tgcccatcggacgtgtacgttatatgccacctccttcgatatgccagcacgctgaagcgg
accttctccattaacctgcaagatgcatgcattcccatcagtggcctgaaagagcttgtg
ggactcaaatgtatcaaagcattctgggcacatacagcagacaccattggcttatgggag
gacttgcatcaaagcaatgatgaactgaacctgaaaagtgccattgagaaattcaccttg
cacccattcaaggcaacagaagggtatcacatagagagcctgcctgtccttgtccaaatt
cacagagagaagaagctaccaatgagtgaattagtgtctgcactggataaaggtgtgcca
gccctccggcatcttcagagactggaatttgagcttggagtccagaacggtcctgaactt
ttccctaaactcgtagaggtcctgccttctctgcagtctctccaacatctggaccttgag
aaaaaccaaataggagactctggagctgagaagctagctggcgttttacattttttggaa
tgtctgaaattgctaaatctgtctcaaaacctcattggagatgcaggagtggagaaactg
gctaaagctttggcatcagtgccttctctacagagcctcagcctttatggaaatgcaatt
gctgacattggagctgaacatctggccttggctttaccagacatgaatttcctgcaggac
ctgaatgttgcgttcaacaagttcacagaccttggagctacaaagctcggtgctgctctg
aaaaactgcacaggaatgaagtccctggagctgtggaatgactgcattccatatggagtt
tttgaacacctccgtcttcaagatccacggataagatcactttga
DBGET
integrated database retrieval system
