Sinocyclocheilus grahami (golden-line barbel): 107568652
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Entry
107568652 CDS
T04918
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107568652 (chd1)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107568652 (chd1)
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107568652 (chd1)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
107568652 (chd1)
SLIK complex
107568652 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
107568652
NCBI-ProteinID:
XP_016110111
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MDGRSEDESVSNGSGESSNSGDESGSGSGSGSGSSSSSSSSSSSQSGSSDSGSGSDSGSH
SDSEKSKEKNDQDNKIDGAAFWKSNPSILTVQRSAMLRKQQLQQQQQSSSNTGSDEDSSS
SDESDDDSKSRSKGSGSDSDSGSGSGSGSSDSPAEEQENSDESVSDYEPSHKVKSRKPSN
KANARNGKNSKAPKKKPSRSSSDEEDDYKKALAGPRRQATVNVSYKEDEELKTDSDDLVE
VCGEDVPPPEEDEFETLERVMEVRIGRKGATGAVTTVYAVEADGDPNANFDPSRQPGEVQ
YLMKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKDQEKKKWLKAASPEDVEYFNCQ
QELMDDLHSQYQLVERIIGHSNQKSAAGFPDYLCKWQGLSYFECSWEDGALIARKFQKCI
DDYMSRNQCKTIPSRECKVLKQRPRFVPMKKQPLYIGADGLELRDYQLEGLNWMAHSWCK
GNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWAPQINV
VVYLGDISSRNMIRTHEWMHPQTKRLKFNVLLTTYEILLKDKSFLGNVSWAFIGVDEAHR
LKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWEMFEEEHGKG
RDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNYKALS
KGTKGSKSGFLNVMMELKKCCNHCYLIKSPEDNEFYNRQEGLQHLIRSSGKLILLDKLLV
RLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNAEGSEDF
CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSV
EEEIIERAKKKMVLDHLVIQRMDTTGKTVLDTGAAPSSSTPFNKEELSAILKFGAEELFK
ESEGEELEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEEEEIDMDTER
DGRHDINWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQINFNGNEGRRSRNRRY
SGSDSDSGTDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIARDA
ELVDKSEHDLRRLAETVHNGCLKTLRENPCGPERSSGGRRGKVKGPTFRISGVQVNAKLV
ISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWE
MIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTANSRKR
KPRGKKNKAVKPKMDDMTNSLSSAPPSDKSSEEEEENEEEEKETPPAKPANRRACVSERP
VKEEEDEDEESDEDEPEDKEPEEKDIMEKVVKKEIKKEKKEEGRDSKEREPKEKEMKSEP
EEEAPAEKAVEVKAEVREKKADTPVHTPSGGDALPLSDESEELDQKTFSVCKERMRPVKA
ALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKFT
EFDARKLHKLYKHAIKKRQENAQAVEQNTSSVNTQIFKHADVERIKESQQDDSSRDSYSS
DRHHSSRYHEHSKDRHAGDSHRKSSDARKRPYSFSNGKDHRERERDQYRERGERQDSRYY
SDGKHRKLDEHRSSREHRSESNSKDRTHSEHRFHSEHRSASDYTHHKSSRDYRYHSDWQM
EHRPRSPLGHRSPFEYSSDHRSTPEQVWSGRKT
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcagtgaggatgaaagtgtcagcaacggcagcggagagtccagtaattca
ggtgatgagtccgggtcaggatcgggttctggctccggctcgagttcaagcagcagcagt
tctagcagtagccaatcagggagcagtgactcaggaagcggctcggattctggaagccac
tcggactcggagaaatccaaggaaaagaatgatcaagacaacaaaatcgatggagcagcg
ttttggaagtccaatcccagtatcctgacagtgcaaaggtcagccatgctcaggaaacaa
cagcttcaacagcaacagcagagctcctcaaacactggctcagacgaggactcttccagt
agtgatgagtcggatgatgactcaaagagcaggagtaaagggtctggttcagactcggac
tcgggctctggttcaggaagtggctcgtctgactctccagcagaggagcaagagaacagt
gacgagtccgtgtcagactatgagcccagtcacaaagtcaagagcagaaaaccttcaaac
aaggccaatgccaggaatgggaaaaatagcaaagctcccaagaagaaaccctcccgctcc
tcctcagatgaagaggacgattataaaaaagctctagcgggacctcggcggcaggccaca
gtcaatgtgagctacaaagaagatgaggaactgaagactgattcagatgacctggtggag
gtgtgtggagaggacgtcccaccgccggaggaggacgagtttgagacactggagagagtt
atggaagtgaggataggccggaaaggagcaactggggccgtaaccacggtgtatgcagta
gaagcagatggagaccccaacgccaactttgaccccagcagacagccaggagaggtgcaa
tacttgatgaaatggaagaactggtcccacattcacaacacctgggagacagaggagacg
ctcaaacaacagaacgtgaagggcatgaagaaactggacaacttcaagaaaaaagatcag
gagaaaaagaaatggctcaaagctgcctcgcctgaggatgtggagtacttcaactgtcag
caggagctcatggatgacttgcattcacaatatcagcttgtggagagaatcatcggacat
tcaaatcagaagtctgccgcaggttttccagattacctttgtaaatggcaggggctgtca
tactttgagtgcagctgggaagacggtgctctcattgccagaaagtttcaaaagtgcatt
gatgattacatgagtcggaatcagtgcaaaaccattccctccagagagtgcaaggtttta
aaacagaggccacggtttgtacccatgaagaagcagcctctctacattggcgcagatgga
ttggagctgcgggactatcagttggagggtctgaactggatggcccattcttggtgcaaa
ggaaacagttgcatcctggcagatgagatgggtctgggcaaaaccatccagactatcagc
ttcctcaattacttgttccatgagcaccagctttacgggcccttccttctggtggtgcct
ctgtctaccctcacatcctggcagagggagatccagctctgggctcctcagataaatgtt
gtggtgtacctgggagacatcagcagcagaaacatgatccggacacatgaatggatgcat
ccgcagaccaaacgactgaagttcaacgtgttgcttactacatatgaaattctgctgaag
gataagtcctttttaggaaacgtgagctgggcgttcattggtgtagacgaggcccatcgg
ctgaagaacgatgactcgctcctctacaagactatgatcgagttcaaatccaaccacagg
ctcctgatcacaggcacacccctccagaactcactcaaagagctctggtctctactacat
tttattatgcctgaaaaatttcactcgtgggagatgtttgaagaggaacatggcaaaggc
agagactctggctataccagccttcataaggagctggagcccttcctgctgcgcagagtg
aagaaggatgtggagaaatctctgcctgccaaggtggagcagatcctcagggtggagatg
agcgctgttcagaagcaatactacaagtggatattgacgagaaactataaagccctgagt
aaaggcactaaaggaagcaagtcaggcttcctcaacgtcatgatggagttgaagaaatgc
tgtaaccactgctacctcatcaaatcgcctgaggacaacgagttctacaacagacaagaa
ggcctacagcaccttattcgcagcagtgggaagctgattcttctggataaactgctggtt
cggctgaaggaacgagggcaccgtgtgcttatcttctcccagatggttcggatgctggac
atcctagcggagtacctgaagtaccggcagttcttattccagagactggatggttccata
aagggtgagatgaggaagcaggcgttagatcatttcaatgcagagggctctgaggatttc
tgcttcctgttgtccacgcgagcaggtggtctgggcattaacctggcctctgcggataca
gtggtcatttttgactccgactggaaccctcagaatgacctgcaggcccaggccagagcg
cacaggattggtcagaaaaaacaggtgaatatataccgtctggtgacaaagggctcggtt
gaggaggaaattattgagagagccaagaagaaaatggtgttggaccacctagtaattcag
aggatggacaccacggggaagactgtgcttgacacgggtgctgctccttcaagttccact
ccattcaacaaggaggaactgtcagccatcctgaagtttggtgctgaagaacttttcaaa
gagtcggagggagaggagctggagcctcaggagatggacattgatgaaatcctgaagaga
gcagagaccagagagaatgaccctggaccatcgactgtaggagaggagctcctctctcaa
tttaaggtagcaaatttctccatgatggaggaggaggagattgacatggacaccgagagg
gatggtagacatgatattaactgggatgacattatcccagaggagcagcggaggagactc
gaggaagaggagcgacaaaaagagctagcagagatctatttactgccccgcatgaggaag
tgcgctaaacagatcaactttaatggaaacgagggcaggcgtagcaggaacagacgatac
tctggttcagacagcgattcgggtaccgacagaaagaggcccaagaaacgaggaagacct
cgaactattccaagagagaacattaagggtttcactgatgctgagatacgcaggtttatt
aaaagttataaaaagtttggtggccctttagaaaggcttgacgctatcgctcgcgatgct
gagttggtggataaatctgagcatgatctgcggcggctggctgagaccgtacacaacggc
tgtttgaaaacgctaagagagaacccctgtggacctgaacgaagctcaggaggcaggcga
gggaaggtgaaaggacccaccttcaggatctcaggggttcaggtcaatgctaagctggtg
atctctcatgaggaggaactggcaccattacacaaggccattcccgctgaccctgaggag
aggaagaggtatataatcccatgtcactcaaaggcagctcattttgacattgagtggggt
aaagaggacgactccagcctgcttattgggatttatgagtacggctatggcagctgggag
atgatcaagatggacccagacctcaacctcacacacaagctccttcctgatgaccctgac
aagaagccacaggccaagcagttgcagacacgagctgactacctcatcaaattactgagc
aaagacctcgccaagaaggaagcacagaaacaagccggcacagcaaattcacgcaagaga
aaaccacggggcaagaagaataaagcggtaaagccgaagatggatgacatgacgaacagt
ctgtcctctgcaccgccatcagataagagctctgaagaagaggaagagaatgaggaagag
gaaaaggaaactcctccagctaagccagccaacagaagagcatgtgtgtcagagcggccg
gtaaaggaggaggaggatgaggatgaagagtctgatgaggacgagcctgaggataaagaa
cccgaagagaaggacataatggagaaagtggtcaaaaaagagattaagaaggagaagaaa
gaggagggtcgggacagcaaagagagggaaccaaaagagaaggagatgaaatccgagcct
gaagaagaggctcctgcagagaaggctgtagaggtgaaagcagaagtgcgggagaagaaa
gctgacacccctgtgcacacgccctcaggaggagatgcacttcccctgtctgacgagtct
gaagaactggaccagaaaaccttcagcgtgtgtaaggagcgaatgcggccggtgaaggca
gcactcaagcagctggatcgtccggagaagggtctgtctgagcgcgagcagctggagcac
acgcgtcagtgcctgatcaaaataggagatcacatcaccgagtgtttgagagaatacacc
aaccccgaacagatcaaacagtggaggaaaaatttgtggatatttgtttcgaaattcacg
gaatttgatgcaaggaagctgcataaactatataaacacgccatcaagaaaagacaagaa
aatgctcaggcagtggagcagaacactagctctgtaaatacacaaatctttaaacatgca
gatgttgagcggataaaggagtcccagcaggacgacagcagcagagacagctacagctct
gacagacatcactcatctcgctaccatgagcacagcaaagatcggcacgctggcgactcg
caccgaaagagctccgatgccaggaagagaccctactccttcagcaatggcaaagaccac
cgagagcgagagagagaccagtacagagagagaggagagcgacaggacagcagatactac
agcgacggcaagcacaggaagctggacgagcaccgctccagcagagagcaccgctcagaa
agcaactccaaggacaggactcactccgaacaccgcttccactctgagcaccgctctgcc
tcagactacacgcatcacaaatcgtcccgggactaccgctaccattcagactggcagatg
gagcaccggccgcgctctccgctgggacaccgctcgcccttcgagtactcgtcagaccac
agaagcacacctgaacaggtctggagcggccgcaagacataa
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integrated database retrieval system
