Sinocyclocheilus grahami (golden-line barbel): 107568704
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Entry
107568704 CDS
T04918
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107568704
03015 mRNA surveillance pathway
107568704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107568704
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107568704
mRNA cycle factors
P-body specific factors
107568704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF1722
Motif
Other DBs
NCBI-GeneID:
107568704
NCBI-ProteinID:
XP_016110167
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MSSSMPAERKKSVNMEEREMGSFSNKDRDADRQAAASRDKSKDETKMSAKKDGGKTAEDK
KRRAEEDKRKREEKERKKKEEEKQRAEEEQKKKEEEEKRQQEEQEKKLLEEEAKRQKEEE
AAQIKEKEEAEQLQQEAWERHHGRKELRVKNQHAPETRPEEAFFSRLDSSLKKNTAFVKK
LRTLTEQQRGSLSQDFDSLNLSKYIGEAVSSMVEAKLKISDVGCAVHLCSLFHQRYTDFA
PHLLAAWKRHFEARKEEKTPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKNIIGA
DRETHTHVSVIISFCKHCGDDIAGLVPRKVKNAVEKFSSSFPPSQIINAEKQQPFQNLLR
EYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQTLA
DLLDENMPELPLDKSIQEEHGPGIDIFTPGKPGEYDLDGGIWEDEDARNFYENMVDLKAF
VPAILFKDNEKSSQTSKEGREGNSTEEWEMELEALDITDEPIDLDVADEAETEELAKKLL
DEQEGREGNSTEELEMELEALDITDEPIDLDVADEAETEELAKKLLDEQEQEDEEASTGS
HLKLIVDAFIQQLPNCINRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFY
ARLVATLHPCMSDVAEDLSSMLKGDFRFHVTLTAESLYWGHDDISASLTLCVFVQMLLSD
FSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAQHLDVRYVTMVENAYYY
CNPPPMEKTVRKKRPPLQEYIRKLLYKDLSKVTTEKVLRQLRKLPWHDADEKSYLICCMI
NIWNVKYNSIHCVANLLAGLVAYQEDVGIHVVDGLLEDIRLGMEVCVCVCVCECECLEKD
GRSSSAMGENEPLDEDDDDDDDEGGAETEEQSGNESEMNEPEEEEGSDNEEEEREEEEEN
TDYLTDSNKENETDEENNEVTLRSGGLKHVACAEDEDFIQALDKMMLENLQQRSGEAVKV
HQLDVAIPLQLKSQLKKSPAPSCDADTDISDTMQFVMLTRKGNKQQFKILNVPLSSHLAA
NHFSQQQVEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPANTNRERRPRYQHPK
GAPNADLIFKTGGRRR
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagtatgcctgctgaacgtaagaagtccgtcaacatggaggagagagagatg
ggctccttcagcaacaaggacagagacgcagacagacaggccgccgcgtcccgcgacaag
agcaaagacgagaccaagatgagcgcgaagaaggacggaggcaagacggcggaagataag
aagagacgggctgaggaggacaagaggaagagggaggagaaggagcggaagaagaaagag
gaggagaagcagagggcagaggaggagcagaagaagaaagaggaggaggagaagagacag
caggaggagcaggagaagaagcttctggaggaggaagccaaacgacagaaagaggaagag
gctgcacagatcaaggagaaagaggaggcggaacagctccagcaggaggcgtgggagcga
caccacggcagaaaggagctgcgcgtgaagaaccagcacgcgccggagacgcgtcccgag
gaggccttcttcagccgcctggactccagcctgaagaagaacacggcgttcgtcaagaag
ctccgcacgctcacggagcagcagcgtggctcgctgtcgcaggacttcgactcgctcaac
ctcagcaagtacatcggcgaagccgtgagctccatggtggaggccaagctgaagatctcg
gacgtgggctgcgccgtgcatctctgctccctcttccaccagcgctacaccgatttcgca
ccgcatctcctcgccgcctggaagagacacttcgaggccaggaaggaggagaagacgcca
aacgtgagcaaactacgaaccgacctgcgcttcatcgccgagctcaccatcgtgggtctg
ttcacggataaagaagggctgtcgctcatctacgagcagctgaagaacatcatcggcgcc
gaccgagagacgcacactcacgtttccgtcatcatcagcttctgcaagcactgcggagac
gatatcgccgggctggtgccgcggaaggtcaagaacgcggtggagaagttcagctcgtcc
ttccctcccagtcagatcattaatgcggagaaacagcagccgttccaaaacctgctgaga
gaatatttcacctctctcaccaaacacctgaagaaagaccaccgagagctgcagaacatc
gagaggcagaacaggcgtatcctgcactctaaaggagagctcagcgaggacagacataag
cagtacgaggagttcgccacctcctatcagaagctgctggcgaacacgcaaacgctggcc
gatctgctggacgagaacatgcctgaacttcctctggacaaatccatccaggaagaacac
ggtccgggcatcgatatctttacgccggggaaaccgggagagtacgatctggacggaggg
atctgggaggatgaggacgcgcgtaacttctacgagaacatggtggatctgaaggcgttt
gttcctgctatcctcttcaaggacaacgagaagagcagccagaccagcaaagagggacga
gagggaaacagcactgaggagtgggagatggagttggaagcgctggacatcactgatgag
ccgatagatctggacgtagccgacgaggccgaaactgaagaactggccaaaaagttactg
gatgagcaagagggacgagagggaaacagcactgaggagttggagatggagttggaagcg
ctggacatcactgatgagccgatagatctggacgtagccgacgaggccgaaactgaagaa
ctggccaaaaagttactggatgagcaagagcaggaggatgaggaggccagcaccggctct
catctcaaactcatcgtggacgctttcatccagcagctcccaaactgcatcaacagagac
ctgattgacaaggctgctatggatttctgcatgaacatgaacaccaagtccaaccgcagg
aagttggttcgagctcttttcacggtgcccagacagaggctggatctgttgccgttctac
gctcgtctggtggccactctgcacccgtgtatgtctgacgtggcagaagacctcagctca
atgctcaaaggagatttcagatttcacgtgacattgactgctgaatctttgtattggggt
catgatgatatttcagcatctctaacgctgtgtgtgtttgtgcagatgctgctgtctgat
ttctctcaccatcatatcgagatggcctgcacactgctggagacgtgtggacgctttctc
ttccgctcaccggagtctcacctgcgcacgagcgtcttactggagcaaatgatgcgtaag
aagcaggctcagcatctggatgtgcgttatgtgacgatggtggagaacgcctattactac
tgcaacccgccgccgatggagaagacggtgcgcaagaagaggccgccgctgcaggagtac
atccgcaaactcctctacaaagacctgtccaaggtcaccactgagaaggtgttgaggcag
ctgaggaagctgccctggcatgatgctgatgagaagagttacctgatctgctgcatgatc
aacatctggaacgtcaagtacaacagcatccactgcgtggccaacctgctggcaggactg
gtggcgtatcaggaggatgtgggcattcatgtggtggacggcctgctggaggacatccgc
ctcggcatggaggtgtgtgtgtgtgtgtgtgtgtgtgagtgtgagtgtttggagaaagac
ggccgctcctccagcgccatgggcgagaacgagcctctggatgaggatgatgatgatgat
gacgacgagggaggagccgagaccgaggagcagtctggaaacgagagcgagatgaatgaa
cccgaggaggaggagggctcagacaatgaggaagaagagcgtgaggaggaagaggagaac
accgactatctgaccgactccaacaaagagaacgagacggatgaagagaacaacgaggtc
actctccgcagcggaggactcaaacacgtggcgtgtgccgaggacgaggacttcatccag
gcgctggacaaaatgatgctggaaaacctgcagcagcgcagtggagaggcagtgaaggtc
catcagctggatgtggccatacccctccagttaaagagccagctgaagaaaagcccggcc
ccctcctgcgacgcagacacagacatcagcgacaccatgcagttcgtcatgctcacacgc
aagggcaacaaacagcagtttaagatcctgaacgtgccgctgtcgtctcatctggcggca
aatcacttcagccagcagcaggtggagcaggaggagcgcatgcgcatgaagaagctgacg
ctggacatcaacgagcggcaggagcaggaggactatcaggagatgatgcagtcactcgct
cagagacccgctcccgcaaacaccaacagagagcgccggccgcgataccagcaccctaaa
ggagccccgaacgcggacctcatattcaagactggcggcaggagacgctga
DBGET
integrated database retrieval system
