Sinocyclocheilus grahami (golden-line barbel): 107568836
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Entry
107568836 CDS
T04918
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107568836
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107568836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107568836
NCBI-ProteinID:
XP_016110310
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MVMARYFSVLLLVLPVVAQELPSAPHGCMEGSCYPATGNLLIGRAINLTATSTCGLDGPE
QYCIVSHLQDLNKCFKCDSQMPYDAYHHDNSHRVENVIYHRDSRGELTWWQSVNGEENVS
IRLNLEAEFHFTHFIMKFKTFRPAAMIIERSSDFGRTWRPYRYFAYNCTKTFPWIPAHSL
QFIDEVICEERYSDIEPSTEGEVIYKVLDPAIHVKDPYSLDIQDLLRITNLRINFTKLRT
LGDNLLDRRPDVLQKYYYALYELVVRGSCFCYGHASECAPVPGVTSRDLGMIHGRCVCKH
NTVGLNCERCRDFYHDAPWRPAETDNAHTCRECNCNGHSNQCHFDMAVYLATGNISGGVC
DNCLHNTMGRNCETCKYFYYQDPTRDIRDPAACIPCDCDPVGSVEGGLCDSNTDLDLGMI
GGQCRCKQNVKGQRCDYCKEGHYGLSPDIPLGCQPCNCDPRGITMIGAPCDQISGDCSCK
RYVTSRYCDQCLPEYWGLSNDLAGCRPCDCDFGGATSNRCRMDNGQCDCRPHLIGRQCSE
AQPAFFCASLDYNKYEAEEAIGRSPDDPTLPGNPRPQAETDCVQHLNNQLRRNRRHHRRH
IAQQQRAALRRIRQLQQTPSVSTVHRERQPGQMVTWTGPGFARVKDGAGLEFTISNIPYA
MEYDIMIRYEPESTEDWEALVSITSLDLPTSLRCGNMLPTEQIYTVTMSHHRRYVEMPRP
FCFEPNNQYVVSIRFQRHAVSHRHLTAFTLIDSLVLIPRYDELPGFRGDDAPDESRRQEM
ELYMCLDSFMTLPMPALAELCTTLICSISAIMYNGALACQCNPQGSLSTECDKVGGQCHC
KPNVIGRKCDQCAPGTYGFGPYGCTVCDCHSQGSVGHQCDPVTGQCPCQHGATGRQCSEC
QPGQWGFPNCRQCQCNGHAESCDPETGACYECRDYTAGQLCERCVNGFYGNPILGSGEHC
HPCPCPGHPDSGHSNGASCHTDYASNQILCQCGEGYAGPRCDRCAPGYYGDPQQPGGTCW
PCQCNGNIDPQDPESCDPQTGQCLRCLYNTDGHSCSECKPGYYGNALAQDCRRCTCVTAG
TVDDYCTDGVCHCDKRTGQCPCKPNIIGHNCDQCTPNHWNFGSVFGCELCECAQPNSLST
HCNMFSGQCHCQPGFGGRQCSECEAFHWGDPRVQCEECNCHPLGSEIAQCDRVTGACVCK
EEASGRRCDECARGFTGNFPKCVPCHPCFQLWDDAVCQIGRDLTHIKDVIAMILEKGEVP
GVNDSRIRELEKKLAQIQDLIRNGDREGIYNLISQTIDDLRAEIALTDGRLMSVSWELNV
TANLDNALKRNLTALEKELKDLNNKLQQLHRELENYHTAELAEQFENVRKYYQISLNSEK
RCNASVYGPQSPVEQSEDTRNRTEALLKERKDSFMRTVTANNKSLSELEEKTHEIDRKLQ
HLNNRVCGGHGNASANSSCPDSPCGGAGCRDSDGMLKCGGKGCKGTVGASLKALDNADDL
HKNLTTTSEELQTIAKKLRDIATLTQTVKTQAKDTLDKAQGKKELFESSNKMLKDFIQKI
RDFLNEEGADPESIEKVAQQVLAISLPVNRTVILNIVEQIKANIANLTNVEGVFNHTSEQ
LAKVKDLLKRAQDAKAQAEGVSDNINKTKEALETSQSAIKKAEKEMTTALENLKNAQNIT
TMLDNKLFNLDSNLMGVMMRLANLSHGVVLLKNKTEQNREMAKDAKAQSDNATQEAAGLQ
EELVNAENLYNELKEKVDSVGGTGEGNISQKAIEMKKEAEELLKKATTGMETLRKLERKF
NKNEQKMQQQRDELADLEKNVTEVREYIRLKVMGYNNCQ
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggccagatatttcagtgttctccttctggttcttccagttgtggctcaggag
ctgccctctgccccacacggctgcatggaaggcagctgttatccggcgacgggaaacctt
ctgattggccgagctattaacctgaccgccacctccacctgtggcctggatgggcctgag
cagtactgcattgtcagtcatttgcaggatttaaataagtgctttaagtgtgactctcag
atgccgtacgatgcctatcatcacgacaacagccacagggtagagaatgtcatctaccat
agagacagcagaggagaactcacctggtggcaatctgtaaatggagaggagaatgtcagt
attagactgaatcttgaggccgagttccattttactcatttcatcatgaagtttaaaact
tttaggcctgctgctatgataattgagcgttcttctgattttggccgtacatggaggcca
tatcgctactttgcctacaactgcaccaagactttcccctggattcctgcccactcgttg
cagtttatcgatgaggtcatctgtgaggagcgctactctgacattgagccgtccactgaa
ggagaggtcatctacaaagtgcttgatcctgcgatccatgtcaaagacccatacagtctt
gacattcaggatttgttgcggatcactaatctccggataaacttcactaaactgcgcact
ctgggtgataaccttcttgaccggcgtccggacgtgctgcagaaatattactatgcgctg
tatgagctggttgtgcgcggcagctgcttctgctatggtcacgcgtcagagtgcgcacca
gtacccggagtgacctccagggatctgggcatgattcatggacgttgtgtgtgtaagcac
aacactgtgggattaaactgtgagcgctgtagagatttctaccatgatgcaccctggagg
cccgccgagactgataacgcacatacatgcagggaatgcaactgtaatggtcactccaac
cagtgtcattttgacatggcggtgtatctggctacggggaacatcagtggaggtgtgtgt
gacaactgtctccacaacaccatgggccgcaactgtgaaacctgtaaatatttttactat
caggatccaactcgagacatcagagacccggcagcatgtatcccttgtgactgtgacccg
gtgggatctgtggagggaggactttgtgacagtaatactgatctggatctgggtatgatt
ggcggtcagtgtcgctgtaagcagaacgtcaagggtcagcgctgcgactactgcaaagag
ggacactatggactcagtcctgacatcccactaggatgccagccatgtaactgtgacccc
cgtggcatcactatgattggggctccttgtgatcaaatcagtggtgactgctcctgtaag
agatacgtaaccagccgctactgcgatcagtgcctgcctgaatactggggactcagtaat
gatctggctggttgcagaccctgcgattgtgactttggtggagcaaccagcaacagatgc
aggatggacaatggtcagtgtgactgtcggcctcatctgattggtcggcagtgctctgaa
gcgcagcctgcatttttctgtgcttctctggattataataagtatgaagcagaggaagct
ataggtcgctcccctgatgatcctactcttccaggcaacccaaggcctcaggctgagact
gactgtgtgcagcatctcaacaatcagctgagaagaaaccgtcgtcatcatcgcaggcac
attgcccaacagcagagggcagcactgagacgcatccgacagttgcagcaaactcccagt
gtaagcactgtgcacagagagagacaaccgggtcagatggtcacatggaccgggccgggc
ttcgctcgggttaaagacggcgctggcctcgagttcacaatcagcaacatcccttacgct
atggaatatgacattatgatcagatatgagccagagtccacagaggactgggaggctcta
gtgagcatcacgtccctggatttacccacaagtctccgctgtggaaacatgctgcccaca
gagcagatatacacagtcacaatgtcccaccacaggaggtatgttgaaatgccaaggccc
ttttgttttgagccaaacaaccagtatgtggtgtccatccgtttccagcgtcatgccgtg
tctcaccgacatctcactgccttcaccctgatagactcacttgtacttatacccaggtat
gatgagctcccaggtttccggggtgatgacgccccagatgagagtcgacgccaggagatg
gagttgtacatgtgtttggattccttcatgaccttgccaatgcctgcgctggccgagctg
tgcactacactcatctgcagcatctctgcgatcatgtataacggtgccctggcatgtcaa
tgtaaccctcagggttcactgagtaccgagtgtgacaaagtcggaggtcaatgccactgt
aaacccaatgttattggccgtaaatgtgatcagtgtgcaccggggacgtacggatttggg
ccatatggctgcactgtatgtgactgccactctcagggctctgtagggcatcagtgtgac
cccgtgacgggccagtgtccgtgccagcatggggcgactggccgccagtgctctgaatgc
cagcctggtcagtggggatttccaaactgtagacagtgccagtgtaacggccatgcggag
agctgtgaccctgaaacaggtgcctgctatgagtgccgagactacacagctggacagttg
tgtgagaggtgtgtaaacggtttctatggtaacccaatattgggttctggcgagcactgt
cacccctgtccatgtccagggcaccctgacagcggacactccaatggagcttcctgtcac
acagactatgcctccaaccagatcctctgccagtgtggtgaaggatatgcaggtcctcgc
tgtgatcgctgcgcccctgggtactatggggatcctcagcagcctggcgggacgtgctgg
ccgtgccaatgcaacgggaacattgacccccaagacccagagtcatgtgacccacaaacc
ggccaatgcctcaggtgcctgtataacacagacggccactcttgttctgagtgtaaacca
ggttattatggaaatgcacttgctcaggactgtaggcgctgtacttgtgtaactgcaggc
actgtagatgactactgtactgatggagtgtgtcactgtgataaacggactggccaatgc
ccctgcaagccaaacatcattggccacaactgtgaccagtgcacccccaaccactggaac
ttcggctcagtctttggatgtgaactctgcgaatgtgcccaaccaaattccctcagcacc
cactgcaacatgttcagtggccagtgtcattgtcagccaggttttggagggcgacagtgc
agtgaatgtgaggcgtttcactggggtgatcccagagtgcagtgtgaagagtgtaactgc
caccctctggggtccgagatagctcagtgtgaccgtgtaacaggagcgtgtgtgtgtaag
gaggaggcttcaggacgtcgctgtgatgagtgcgcccgcggctttaccggaaacttcccc
aagtgcgttccctgtcatccctgcttccagctatgggatgatgctgtgtgccagatcggc
cgagatctgacccacatcaaggatgtcattgccatgatcctggaaaagggtgaggttccc
ggagtcaacgatagccgcatacgtgaactggagaagaagctcgcacagattcaagacctg
attcgaaatggagaccgagagggaatctataacctaataagccagaccattgatgacttg
agagcggagatagctttgacagatgggcgtctgatgagcgtgagttgggagctgaatgtg
acggcaaaccttgacaatgctctgaaacgaaacctaacagcactggagaaagaactgaaa
gacttgaacaataagcttcaacaactgcacagagagctggagaactaccatactgctgaa
ttggcagagcagtttgaaaacgttcgcaagtactaccagatttcattgaattcagagaag
cgctgtaatgcctccgtatacggaccccagagtcctgtggaacagtctgaagacacacgt
aaccgtaccgaagctctgttgaaagaaagaaaggacagcttcatgcgtacagtcaccgcc
aataataaatctttgtctgaactggaggaaaaaactcatgagatcgacagaaaactccag
cacctcaacaacagggtatgtggtggccatggcaatgctagtgctaatagtagctgtcca
gatagcccctgtggaggagctggctgccgtgatagcgatggtatgctgaagtgtggaggg
aaaggatgtaaaggaactgttggtgcctcattgaaggccctggacaatgctgatgatctt
cataagaacctgaccactaccagtgaggagctacaaaccattgctaaaaagctccgagac
attgctacactcacccagactgtgaagactcaagcgaaggacactcttgataaagcccag
ggcaagaaagaactctttgagagctccaacaagatgcttaaagacttcattcagaagatt
agagattttttgaatgaggagggagcagatccagaaagcattgaaaaagtggcccagcag
gttttggcaatctccttgccagtcaacaggaccgtaatactcaacatcgtcgagcagatc
aaagctaacatcgccaacctcaccaatgtggagggagtgttcaatcacacctcagagcaa
ctggccaaagtcaaggatctgcttaagagagctcaagatgcaaaggctcaagctgaaggg
gtgagcgataatatcaataaaactaaagaagcacttgaaacctctcagagtgccataaaa
aaagctgagaaggaaatgaccacagccctagaaaatctcaagaatgcccagaacatcact
actatgcttgacaacaaactcttcaatttagacagcaacctcatgggtgtgatgatgcga
ctggccaatttgtctcatggagtggttttattgaagaataaaacggagcagaacagggag
atggcaaaagatgccaaagctcagtccgacaatgcaactcaagaggctgctggacttcaa
gaggaactggtaaatgccgagaatctgtataatgagctgaaagagaaggtggactctgtg
ggcgggacaggagaaggtaacattagccagaaagctatagagatgaagaaagaagcagag
gaactgctgaagaaagccaccacaggcatggaaaccctcagaaaattagagagaaaattc
aacaagaacgagcagaaaatgcagcagcagcgggatgaattggcggatctggagaaaaac
gttacagaagtcagagaatatatccgattaaaagtcatgggctacaacaactgtcagtag
DBGET
integrated database retrieval system
