Sinocyclocheilus grahami (golden-line barbel): 107569013
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Entry
107569013 CDS
T04918
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107569013
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107569013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107569013
NCBI-ProteinID:
XP_016110501
UniProt:
A0A672SAN1
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPAGVGQRLESPGGHGGSAGAGYAHMNGWANGTYSGQVAAAAA
AAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASP
SGYGGISYTQHQNSSVASSAAIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREMISMYLP
TGESGDPSVQSRLHALPQHYQSTAAGVNGTVPLTHI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggaccttcattccccaggaccccaaaccaacacgaat
ccggggcaaacgggtccaaactcggggagcaaagccaaccaagaccgcgtaaagagaccc
atgaacgcttttatggtctggtcccggggccagcggcgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaggtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgcgccatgcacatgaaggag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggctggcggcttgctcggcggcgcgggtggcggggtcgggatgagtcctgca
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccggcgctggctac
gcgcacatgaacggctgggcgaacggcacttactcgggccaggtggccgccgcggcagca
gcggctgcgatgatgcaggaggcgcagcttgcctacagccagcacccaggtagtgggtct
caccatcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgttacgat
atgactgctctccagtacagccccatctcgaactcccagagctacatgagcgcttctcca
tccggctacggtgggatatcatacacgcagcatcaaaactccagcgtcgcttcttctgcc
gccatcggtacgctgagctcgctcgtcaagtctgaacccaatataagccctccggtcacc
acacactcccgaggcccctgccccggagacttgagagagatgattagcatgtatttaccg
accggcgagtccggggatccgtctgtgcagagcagactgcatgccttaccgcagcactat
cagagcaccgctgccggagtaaacggaactgtcccattgacgcatatttga
DBGET
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