Sinocyclocheilus grahami (golden-line barbel): 107569056
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Entry
107569056 CDS
T04918
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107569056 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107569056 (nhlrc1)
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107569056 (nhlrc1)
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107569056 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_11
DUF7741
zf-H2C2_2
zf-C3HC4_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107569056
NCBI-ProteinID:
XP_016110546
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MSETPVPSCMRAEDVLTEIESNLLECKVCFERFSLQKKNQTAQNLPCGHVLRLKCVCALS
HSVQKKLECPFCRKVWDVGSTSECRALADLQELLLCESRPKSSSDHQGWTESSGWGTLRL
HLAFGGWGTMVNPTGMAVDETSGQTVVVHDADKRVVVFDAQGTLLNVFGRSSNICYPLDV
SLTKTGHILVTDAGDQSLKVFTSKGHPLATVQGFRLPWGVDVDNRGRVLVTDAELGTLNQ
VVMDFSHGVVLAKRVVLKELMHPRSVASCRASGNIAIVERLRSSFTLRIFNSDFVPLTQM
DGFGLHLKSALSLVMSAVAFDRNGDLIVGDVQNGMVWSLGNPQKNPALTPLVSGLMRPAA
LAATALNVLVVLDSGDHAVKFYAADTEDLYCDQK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgcccgtcccatcatgtatgagagccgaagacgtcctgacagagatcgag
tcgaacctgctggagtgcaaagtgtgttttgaaaggttctccctgcagaagaaaaaccaa
acggcacaaaatcttccctgcggccatgtgctccgtctcaaatgcgtctgcgccttgtct
cactccgtccagaagaaactagagtgtcctttttgtaggaaagtgtgggacgttggcagc
acctctgaatgccgtgcgcttgcagatctccaagagctcctgctgtgtgaatctcgtccc
aaatcgtcctctgatcatcaaggatggactgaaagctcgggttgggggacgttgcgtctc
catttggccttcggaggatgggggacgatggtcaaccctactggaatggctgtggacgaa
acatcaggacagactgttgtggtgcacgatgctgataaacgagtcgttgtttttgatgca
caaggaactcttttaaacgtctttggacggtcgtccaacatctgttacccactagatgtt
tctttgactaaaaccggacacattttggtcaccgatgctggtgaccaatcacttaaagtc
ttcacgtccaaaggccatcctctggcgaccgttcaaggttttcgattgccgtggggtgta
gatgtagacaaccgtggacgagttttagtgaccgacgctgagttgggaaccctaaaccaa
gtcgtaatggacttttctcatggcgtggttttagctaagcgagtcgttttgaaagaactg
atgcatccgcgttcggttgcttcttgcagagcttccggaaacatcgcaatcgtggagcga
cttcggagcagcttcacgctgaggatattcaatagtgacttcgttcctttgacgcagatg
gacggtttcggtcttcacttgaagagcgctttgagtttggttatgtctgcagtggctttt
gatagaaatggagacttgattgttggggacgtgcagaatggcatggtttggagtttggga
aatccacagaaaaaccctgcgctgactccgctagtgagcggactgatgcgtccagcggcg
ttggctgcgacggcgttgaacgtgcttgttgtcttggacagtggtgatcatgcggtcaag
ttctacgccgcggacactgaagacttatattgtgatcaaaaatga
DBGET
integrated database retrieval system
