Sinocyclocheilus grahami (golden-line barbel): 107569480
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Entry
107569480 CDS
T04918
Name
(RefSeq) autophagy-related protein 16-2-like
KO
K20868
autophagy-related protein 16-2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107569480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107569480
03029 Mitochondrial biogenesis [BR:
sgh03029
]
107569480
Membrane trafficking [BR:
sgh04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107569480
Others
Specific organelles associated proteins
Auto phagosome
107569480
Mitochondrial biogenesis [BR:
sgh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107569480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ATG16
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_VPS8
NBCH_WD40
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_Nup120_160
AvrPphF-ORF-2
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
107569480
NCBI-ProteinID:
XP_016111072
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MIMAASQRARNSEVKQSETWKRHIIRQLKYRNRTQTSVFQELVESYHSLLEKSKQRALIT
KGILGSGSRPSLSEDSLTSLKTTTGELAYQVVELQQRIQLKEVTLDEQHTKLYEVQNHLS
VLTSEHSGLQEHVAEVQTRNRLLKQEYDSLLEQHQNMERTYRQEKLRSSEILDNMIGPKQ
QAAVRMNHRNEKRVRAREASLHKELQMAASKNVNIHEESGNVSPPKPSSPKSDSSQRLER
SHGPLFRSASATSPRIISSIRGLFDFLFGHQRACTGGRDQSLEERCALLLTAAVTRFHSG
QQVRQLVSLAAWESLYAPLLNPRGHQRACTGGRDQSLEERCALLLTAAVTRFHSGQQVRQ
LVSLAAWESLYAPLLNPRGHQRACTGGRDQSLEERCALLLTAAVTRFHSGQQVRQLVSLA
AWESLYAPLLNPRGHQRACTGGRDQSLEERCALLLTAAVTRFHSGQQVRQLVSLAAWESL
YAPLLNPRGHQRACTGGRDQSLEERCALLLTAAVTRFHSGQQVRQLVSLAAWESLYAPLL
NPRGHQRACTGGRDQSLEERCALLLTAAVTRFHSGQQVRQLVSLAAWESLYAPLLNPRGH
QRDAHELGINAVRFSTSSNLLATGGTDRVIKLWGIEAGTLQNRGTLDGSNEGITSIEFNP
TGTQILAASYDKSALFWRLEDSVPKVTLTGHSRKVTAARFKYSQRQVVTGSADRTVKIWD
LQRAACIQTIEVLSFCSDVVCSEYLIISSHYDRKIRFWDSRAGTCTQEVPLQGRVTSLDL
CPNHRQLLSCSRDDILQLVDLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADG
AVYIWNVSTGNLEKRLPDMHRASISAVAWSLSGEYVVSVDKSRRAVLWSDI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcggcgtcgcagcgcgcgagaaactctgaagtcaaacagagcgaaacatgg
aagcgtcacattatcagacagctgaagtatcgcaacaggacccagacgagcgtcttccag
gagctcgtagagtcatatcacagtctgctggagaagtccaagcagagagccctcataacc
aaaggcattctgggatcagggtcaaggccctccctatctgaagattcgctgacatctcta
aaaacaaccaccggtgagcttgcataccaagtggtggaactgcagcagagaatccagttg
aaggaagttacactggatgagcaacataccaagctatatgaggtccaaaaccatctcagt
gttttgacatcagagcacagcgggcttcaggaacacgtggcagaggtacagactagaaac
cgacttctgaaacaagaatatgattctctgctggagcagcaccagaacatggagaggacg
taccgacaagagaaactccgcagctcagagatcctggacaacatgatcggtccaaaacag
caggctgctgtccgcatgaaccatcgcaatgagaagagagtgagagccagagaggccagt
cttcacaaagagcttcagatggctgccagtaagaatgtgaatattcatgaagagtcagga
aatgtgtcacctcccaagccatcatcccctaaaagtgactcttcacagaggttggagaga
tcccatgggccacttttcaggtctgcttcagctacatctccccgcatcatcagctccatc
agaggactttttgatttcctttttggacaccagcgtgcatgcacagggggaagagaccag
tctcttgaggagaggtgcgctctgcttttaacagcggcggtgacgaggttccattccgga
cagcaggtccggcagcttgtgtctctggcggcatgggagtccctctacgctcccctcctg
aacccacgaggacaccagcgtgcatgcacagggggaagagaccagtctcttgaggagagg
tgcgctctgcttttaacagcggcggtgacgaggttccattccggacagcaggtccggcag
cttgtgtctctggcggcatgggagtccctctacgctcccctcctgaacccacgaggacac
cagcgtgcatgcacagggggaagagaccagtctcttgaggagaggtgcgctctgctttta
acagcggcggtgacgaggttccattccggacagcaggtccggcagcttgtgtctctggcg
gcatgggagtccctctacgctcccctcctgaacccacgaggacaccagcgtgcatgcaca
gggggaagagaccagtctcttgaggagaggtgcgctctgcttttaacagcggcggtgacg
aggttccattccggacagcaggtccggcagcttgtgtctctggcggcatgggagtccctc
tacgctcccctcctgaacccacgaggacaccagcgtgcatgcacagggggaagagaccag
tctcttgaggagaggtgcgctctgcttttaacagcggcggtgacgaggttccattccgga
cagcaggtccggcagcttgtgtctctggcggcatgggagtccctctacgctcccctcctg
aacccacgaggacaccagcgtgcatgcacagggggaagagaccagtctcttgaggagagg
tgcgctctgcttttaacagcggcggtgacgaggttccattccggacagcaggtccggcag
cttgtgtctctggcggcatgggagtccctctacgctcccctcctgaacccacgaggacac
cagcgtgatgctcatgagctgggaatcaatgctgtgaggttcagtaccagttcaaacctg
ctggctacaggaggaactgacagagtcatcaaactgtggggcattgaagcaggaactctt
cagaacagagggacattagatggaagtaatgaggggatcaccagcattgagttcaacccg
acgggtactcagattttagctgcgtcatatgacaagtcagctctattctggaggctggag
gacagcgttcccaaggttacattgacgggtcattctcgtaaagtgacagctgccagattt
aaatacagtcagaggcaggtggtcacgggcagtgcggacaggaccgtgaagatatgggac
ctccagcgagcagcgtgcatacaaaccattgaggttttgtctttctgtagtgatgttgtg
tgctccgagtacctcatcatcagcagccattatgacagaaaaatacggttttgggacagc
agggcagggacctgcacacaggaagtgcctcttcagggcagagtgacatcactggacctc
tgccccaatcacaggcagctgctcagctgctccagagatgacatcctgcagctggttgac
ctgagaaagagtaacgacagggtggccttcagagcggagggattcaaatgtggaagtgac
agcaccaaggccatcttcagtccggatggcagtttcctggcagctggctctgcagacggt
gccgtctacatatggaatgtgagcacaggaaacctggaaaaacggcttcctgacatgcac
agagcttcaataagcgcggtggcctggtcgttgtcaggtgaatatgtggtaagcgtggac
aagagccgtcgagctgtgctctggagcgatatctga
DBGET
integrated database retrieval system
