KEGG   Sinocyclocheilus grahami (golden-line barbel): 107569635
Entry
107569635         CDS       T04918                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107569635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107569635
   03036 Chromosome and associated proteins [BR:sgh03036]
    107569635
Spliceosome [BR:sgh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107569635
 Complex B
    107569635
 Complex C
   U2 SnRNP specific factors
    107569635
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107569635
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF2298
Other DBs
NCBI-GeneID: 107569635
NCBI-ProteinID: XP_016111242
LinkDB
Position
Unknown
AA seq 1164 aa
MQVRTYMDVMKEQHLSKEEREIRLQMLEKAKSGELKAVNGSAASQAAAAKRKRRWDQTAD
QTPSNTTPRKVSSWDQADGGADTPGHTPSSSRWDETPGRSKGSETPGATPSTRMWEPTPS
HTPAGAATPGRDTPGHATPGHGGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGD
ESVGETPTPGASKRKSRWDETPASQMGSSTPLLTPGKTPLGTPAMNMATPTPGHLMSMTP
EQLQAWRWEREIDERNRPLTDEELDAMFPEGYKVLPPPAGYVPIRTPARKLAATPTPIGG
MTGFHMQTEDRSMKQVNDQPSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKL
LLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRIL
YKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNM
DEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAIL
PHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRG
KGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDG
VEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDE
AEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNA
LGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYE
YLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVG
RIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNN
LKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGE
MGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVF
ETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDAL
IAHYPLVYNDEKNSYIRYELEYFM
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgcaggtcaggacgtacatggatgttatgaaggagcagcatctgtccaaagaggagaga
gagatcaggctgcagatgctagagaaagcaaaatctggagagctgaaagcagtgaacggc
tctgctgcatctcaggctgctgcggccaaacgcaaacgacgctgggaccagacagctgac
caaacccccagcaacaccacacccagaaaagtgtccagctgggaccaggcagatggcggt
gccgatacaccaggacacacaccttccagcagtcgctgggatgagacacctggccgttcc
aaaggtagcgagaccccgggagctactccgagcacccgtatgtgggaacccacaccaagc
cacaccccagctggagctgccacgccaggtcgagacacccctggacatgccactcctggc
cacggaggggccacttccagtgtacgcaagaaccgctgggatgagacaccaaagacagag
agagagacacctggtcatggaagtggctgggctgagactccacgtacagacagaggagac
gagtcagtgggtgagacgcccaccccaggtgcaagcaagaggaagtcaagatgggatgaa
acaccagccagtcagatgggctcttcaactcctctgctcacccctggaaaaacccctctg
ggcacacctgctatgaatatggccacacccactccaggtcacctgatgagcatgactcca
gaacagctgcaggcttggcgctgggagcgagagattgacgagaggaatcgcccattgact
gatgaggaacttgatgccatgtttccagaaggatacaaagtactgcccccaccagcaggc
tatgtacccatccgcaccccagcacgtaagttagctgccacccccacccccatcggaggc
atgactggcttccacatgcaaacagaggacagatctatgaaacaagtcaacgatcagccc
tccggaaacctgcccttcctcaagccagatgacatccagtactttgataaactgctggtt
gaagttgacgagtccacgctcagtccagaagaacagaaggagcgcaagatcatgaagctg
ctcctcaagatcaagaatggaacaccacctatgaggaaggctgctcttcgtcaaatcaca
gacaaagccagagagtttggtgcaggacccctctttaaccagatcctgccattgttgatg
tctcctacactggaggaccaggagcgtcatctcttggtgaaagtcattgatcgtatcctc
tacaaacttgatgacttggttcgaccatatgtccacaagattcttgtggtgattgagccc
ttgctgattgatgaagattactatgctagagtagagggtagagagatcatctccaacttg
gccaaggctgctggtctggccactatgatctctaccatgaggcctgatattgacaacatg
gacgagtatgtgagaaacacgacagctcgtgctttcgccgttgtagcgtctgccctgggc
attccatctctcctgcctttcctcaaggctgtttgcaagagcaagaaatcctggcaggct
cgtcacacgggtatcaagatcgtacagcagatcgctattctcatgggttgtgctatcctg
ccccatctccgcagcttggtggagattatcgagcatggtctcgtggatgagcagcagaaa
gtgcgaaccattagtgctctggctatcgctgccctggctgaagctgctacaccatacggt
attgagtcctttgattcggtgctgaaacctctttggaaaggtatcaggcaacacagaggc
aagggtcttgctgccttcttgaaagccattggatacttgattcctcttatggatgctgaa
tatgccaactattacaccagagaagtgatgcttatccttattcgagagttccagtcacct
gacgaggaaatgaagaagattgtcctcaaggtggtaaagcagtgctgtggcacagatggt
gtggaagccaattacattaaaacagagattttgccccccttcttcaaacatttctggcag
cacagaatggcgttggataggcgcaactacagacagttagtggacactacagtggagctg
gccaataaggtaggggcagctgagattatctcccgtatcgtggatgacttgaaggatgaa
gctgagcagtacagaaaaatggtcatggagaccattgagaaaattatgggcaaccttggt
gccgctgacatcgatcacaaactggaggagcagcttattgatggaatcctgtacgccttc
caggaacagaccactgaggactctgtaatgctaaatggctttggtacggtggtaaatgct
ctgggtaagagagttaaaccatacttgcctcagatctgcggtacagtgctgtggcgtctc
aacaacaaatctgccaaagtccgtcaacaggctgctgacctgatttctcgcacagcggtg
gtcatgaagacatgccaagaggaaaagctgatgggccatttgggtgtggtgttgtatgag
tatctgggagaagaatacccagaagtgctgggtagcattcttggagcccttaaagctatt
gtcaatgttattggtatgcacaagatgacaccacctatcaaagacttgcttccacgtttg
actccaatcttgaagaacagacatgagaaggtgcaggagaactgcattgatctagtgggc
agaatcgctgacaggggtgcggagtatgtgtctgccagggaatggatgcgcatctgtttt
gaattgctagagttgttgaaagcccacaagaaggccatccgcagagctactgtcaatact
ttcggctacatcgccaaggccattggtcctcacgatgtgctggccacgctgctcaacaat
ctgaaggtgcaggaacgtcagaaccgtgtgtgcacaacggtagccatcgctattgtggcc
gagacgtgttcgccgttcaccgtgcttcctgcgttgatgaacgagtaccgtgttcctgaa
cttaacgttcagaacggtgtcctaaagtctctgtccttcctgttcgagtacatcggtgaa
atgggcaaagattacatctatgccgtcacacctttgttggaggatgctctgatggacagg
gatcttgtacacaggcagacagccagtgctgtggtgcagcatatgtctctgggagtgtat
ggctttggctgtgaagattctctcaatcatttgctcaactatgtttggccaaatgtcttc
gaaacgtcccctcatgttatccaagctgtcatgggggcccttgagggtctgcgggtggca
attggaccctgccgcatgctgcagtattgcttgcagggtttgttccatcctgctcgcaaa
gtgcgtgatgtgtactggaagatctacaactccatctatatcggctcccaggatgcactg
atcgcacattatcctcttgtctacaatgatgagaagaactcatacattcgctatgagctg
gagtacttcatgtga

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