Sinocyclocheilus grahami (golden-line barbel): 107569767
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Entry
107569767 CDS
T04918
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03440
Homologous recombination
sgh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107569767
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107569767
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107569767
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107569767
03036 Chromosome and associated proteins [BR:
sgh03036
]
107569767
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107569767
Peptidases and inhibitors [BR:
sgh01002
]
Metallo peptidases
Family M67
107569767
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107569767
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107569767
BRISC complex
107569767
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
107569767
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107569767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF6262
DUF7385
Motif
Other DBs
NCBI-GeneID:
107569767
NCBI-ProteinID:
XP_016111409
UniProt:
A0A672MSJ0
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLELNK
HSIIKLQKEKERLTQELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgctgtacatttagagtcagacgcatttctagtatgcatgaaccacgct
ctgagcacggagaaagaggaagtaatggggctctgcattggcgaggtggacacaaaccgc
attgtgcacattcattctgtcataattctgcgtcgatcagacaagaggaaagaccgagtg
gagatctccccagagcagctgtcagccgcatctactgaagcggagaggttggctgatatg
acgggacgtcccatgagggttgtgggctggtaccactctcatccacacattactgtgtgg
ccatcacatgttgatgttaggactcaagcaatgtatcagatgatggatcagggttttgtt
ggcctcatcttctcatgctttatagaagataaaaacacaaagactggtagagttctgtac
acctgcttccagtctgtacaagcccagaaaggctcagagtatgaacggattgagatcccc
atccatgtagtcccacatgaagccattgggaaagtatgtctggagtctgccgtggaacta
cccagaatcctctgtcaagaagaacaggatacatacagaaggattcacagtttaactcat
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggccataagcggcccgctgctgcagtggctggaagatcgactggaactgaataaa
catagtatcatcaaactccagaaagagaaagagcgactgacacaagaattggcttcatta
taa
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