Sinocyclocheilus grahami (golden-line barbel): 107569867
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Entry
107569867 CDS
T04918
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107569867
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107569867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_2
U-box
zf-RING_6
zf-RING_5
DUF4407
MRP-S31
Motif
Other DBs
NCBI-GeneID:
107569867
NCBI-ProteinID:
XP_016111510
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MAEASVFSVEQFSCPVCLDLLKDPVAIPCGHSYCMSCITDCWDQEDQKRVYSCPQCRQTF
SPRPALAKNTMLAEVVEKLKKTKLKAAVPAGPGDVECDICTGRKHKAVKSCLVCLESYCQ
THFERHEEFRSGKRHKVTDATGRLQQMICHQHDMPLLVFCRTDQQCVCMLCAMDEHKNHE
TVSTAAERTEKEKHLKETQSKLQQRIQQRQKDLEQLREAVESHKRSAQTAVEDSERIFTE
LIRSIERSRSEVTQRIRDQEKTAVSRAEGQMERLEQEIEDLKKRNSELEQLSQTDDHIHF
LQSLQSLSAPPESTESISVSFLFSLDGVRESVCQLRHKLEDFCKEEMKKISDTHSNIVPK
TREDFLKYSHQFTLDPNTAHKLLYFSDWEEVTFNNSHIQPYPDHPDRFDVYPQVLCRESV
SGHCYWELEWRGSDVNISVSYKSISRKGSGYECFFGYNDQSWSLFCYPSSFSFWHNNKET
KLPVPSSCRRIGVYVDHSAGTLSFYSVSDTMNLIHTVQTTFTQPLYPGFYVWGTVNLCNL
AIIDDSEK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtgttttttcagtggagcagttcagctgtccagtgtgtctggatctc
ctgaaggatccagtggccattccctgtggacacagttactgtatgagctgcattacagac
tgctgggatcaagaggatcagaagagagtctacagctgccctcagtgcagacagaccttc
agtccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaag
aagaccaaactaaaagctgctgttcctgctggacctggagacgtggagtgtgacatctgt
actggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctggagtcttactgtcaa
actcactttgagcgtcatgaggagtttcgttcaggaaagagacacaaagtgactgatgcc
acaggacgactgcagcagatgatctgccatcaacatgatatgcctctattggttttctgt
cgtactgaccagcaatgtgtttgcatgctgtgtgcaatggatgaacataaaaaccatgag
actgtatcaactgcagcagagaggacagagaaagagaaacacttgaaggagacacagagt
aaactccagcagagaatccagcagagacagaaagatcttgagcagctgagagaggctgtg
gagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgag
ctcatccgctccattgagagaagccgctctgaggtgacacagcggatcagagatcaggaa
aagactgcagtgagtcgagctgaaggacaaatggagcgactggagcaggagattgaagat
ctgaagaagagaaactctgagctggagcagctttcacagacagacgatcacatacatttc
ctgcagagtcttcagtcactctcagctcctcctgaatctacagaaagcatctctgtcagt
ttcctcttttctttggatggtgtgagagaatctgtctgtcagctgagacacaaactggaa
gatttctgcaaagaggaaatgaaaaagatatctgacactcacagtaacattgttcccaag
accagagaggacttcctaaaatattcccatcagttcactctggatccaaacactgcacat
aaactcctctatttttctgattgggaggaagtgactttcaataacagccatatccagccg
tatcctgatcacccagacagatttgatgtttatcctcaggtgttgtgtagagagagtgtg
agtggacactgttactgggagcttgagtggcgtgggagtgatgtgaatatatcagtgtca
tataagagcatcagcaggaagggatctggttatgagtgtttctttggatataatgatcag
tcctggagtttgttctgctatccctccagtttctcattctggcacaataacaaagagact
aaactccctgttccctccagctgcaggagaataggagtgtatgtggatcacagtgcagga
actctgtccttctacagcgtttctgacacaatgaacctcatccacacagtccagaccaca
ttcactcagccgctctatcctgggttttatgtttggggaacagtgaatctctgtaattta
gcaattatagatgattctgaaaagtaa
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