Sinocyclocheilus grahami (golden-line barbel): 107569887
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Entry
107569887 CDS
T04918
Symbol
rfc4
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03030
DNA replication
sgh03410
Base excision repair
sgh03420
Nucleotide excision repair
sgh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107569887 (rfc4)
03410 Base excision repair
107569887 (rfc4)
03420 Nucleotide excision repair
107569887 (rfc4)
03430 Mismatch repair
107569887 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgh03032
]
107569887 (rfc4)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107569887 (rfc4)
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107569887 (rfc4)
DNA replication proteins [BR:
sgh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107569887 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
107569887 (rfc4)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107569887 (rfc4)
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107569887 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
107569887 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_16
AAA_22
AAA_11
Viral_helicase1
DUF815
AAA_5
RuvB_N
Kinesin
Mg_chelatase
AAA_30
AAA_19
AAA_24
ResIII
SLFN-g3_helicase
AAA_7
bpMoxR
Motif
Other DBs
NCBI-GeneID:
107569887
NCBI-ProteinID:
XP_016111539
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MQAFLKGSSSQSVKAQKVSSSSSSAGEKKQKAVPWVEKYRPRCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGXDLQLWCTLLLRNTSTTPHSDSHTDRTR
CCSLTRSGKPCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVSRIIEPL
TSRCSKFRFKPLANDIQQERLLQICGKESLKYTTEGIEALVSVSEGDLRKAITYLQSAAR
LHTEQEITEQIIIEIAGVVPPKVIETLLQISYRGTFEKLELAVKDMIDEGYAATNVLNQL
HDAVIDEKLSDKQKSVITQKMAEVDKCLADGADEYLQLLSLCSVIMQQATHST
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaagggtcttcgtcgcagagtgttaaagctcagaaagtatcctcc
tcttcatcatcagctggagagaagaagcagaaggccgtgccctgggtggagaaatacagg
ccgaggtgtgtggatgaagtggccttccaggaggaggtggtggcagtactgaagaagtct
ctagagggcgctgatctgcccaacctgctgttttatggccctcctggaaccggaaagacg
tccaccatcctagcggccgccagagagctttatgggtaagatctccagctgtggtgcaca
ctattgctgagaaacacgagcactactccgcactcagattctcacactgaccgaacgcgg
tgttgctctctgacccgcagcgggaagccctgtcctccgtttaagatcatcatcctggac
gaggcggactccatgaccggcgcggctcaggcggctctcagacgcaccatggagaaagag
tctcgaaccacgcgcttctgcctcatctgcaactacgtcagccggatcattgagccgctg
acctccagatgctccaagttccgcttcaaaccgctggccaatgacattcagcaggagcgc
ctgctgcagatctgcgggaaggagagcctcaagtacaccacagagggcatcgaggctctg
gtgagcgtgtcggagggagatctcaggaaagccataacttatctccagagcgccgccaga
ctccacaccgagcaagaaatcactgagcagatcatcattgagatcgctggggtggttcca
cccaaagtgatcgagacgctcctccagatctcttacagaggcacgtttgagaagctggag
ctcgctgtgaaggacatgatcgatgagggatacgccgccaccaacgtcctcaaccagtta
cacgacgccgtcatcgacgagaagctgagcgataaacagaaatccgtcatcacacagaag
atggctgaggtggataagtgtctggcagacggcgcagacgagtatctgcagttactgagt
ctctgctctgtcatcatgcagcaggccacacacagcacctga
DBGET
integrated database retrieval system
