Sinocyclocheilus grahami (golden-line barbel): 107570162
Help
Entry
107570162 CDS
T04918
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04150
mTOR signaling pathway
sgh04310
Wnt signaling pathway
sgh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107570162
04150 mTOR signaling pathway
107570162
09133 Signaling molecules and interaction
04519 Cadherin signaling
107570162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107570162
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107570162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
LRP1-like_beta_prop
SGL
EGF_LRP2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
107570162
NCBI-ProteinID:
XP_016111849
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MGNKLYWTDSETNRIEVAELDGTHRKVLFWQDLDQPRAIALDPARGYMYWTDWGEIPKIE
RAGMDGTHRSVLIDSEIYWPNGLTLDYDLQKLYWADAKFSFIHRCNLDGSGREVVVKGSL
PHPFALTLYEETLFWTDWNTHSIHACLKHTGENSHEIHTNIFSPMDIHVYSQERQPLEVT
STCALKNGGCSHLCLLSPVKPYYQCACPTGVQLLDDNKTCRDGATQLLLLARRTDLRRIS
LDTPDFTDIVLQTDDIRHAIAIDFDPVEGHIYWTDDEVQAIRRSRLDGSEAQFVVTSQVN
HPDGIAVDWIARNLYWTDTGTDRIEVTRLNGSMRKILISEELDEPRAIVLDPAAGCSCAA
VCDCCCSVMLDGSLAVSAASQTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD
TGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRAAMDGSGR
ITLVPNVGRANGLTIDYTERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFGLTQYQD
YIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQSGWNACASTNGHCSHL
CLAVPVSSFVCGCPAHYSLNYDNKTCSAPTSFLLFSQKTAINRMVIDELQSPDIMLPIHS
LRNVRAIDYDPLDRQLYWIDSKQNAIRRAQEDGNQSETVVSSASLGLQPYDLSIDVYSRF
IYWTSEVTNVINVTRIDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQERSPKIERAA
LDGTEREVLFFSNLGKPVALAVDNELGKLFWVDMDLRRIESSDLSGANRIVIEDSNILQP
VGLTVFGNFLYWIDRQQQMIERIDKITREGRTKIQARIASLSDIHAVHELRMEEYNKHPC
TSDNGGCSHICLVKGDGSTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCVSGEVDCIPQA
WRCDGFAECDDSSDERDCPVCSEEEFQCDSKQCVDFSLRCNGEINCQDRSDENKCEVLCP
MDQFTCANGQCIGRHKKCDHNTDCTDNSDEIGCYATEEPSFPPTNTIGSIVGVVMLLFVV
GAVYFVCQRVLCPQMKDDGETMTNDFVVHGPPPVPLGYVPHPGSLSGSLPGMSRGKSVIG
SLSIMGGSSGPPYDRAHVTGASSSSSSSTKGPYFPPILNPPPSPATVRSQYTMEFGYSSN
SPSTHRSYSYRPYNYRHFAPPTTPCSTDVCDSDYTPGRRAPHASSAAAKGYTSDLNYDSE
PLPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagctctactggaccgactccgagaccaatcggatagaagtggccgagctg
gacgggacgcaccggaaagtgttgttctggcaggatctggaccagccgagagccatcgct
ctggatccggcccgagggtacatgtattggacggattggggtgagatcccgaagatcgag
cgcgctgggatggacgggacgcatcgctcggtcctcatcgactctgagatatactggccc
aacggcctgacgctcgactacgacctgcagaaactctactgggccgacgccaagttcagc
ttcatccaccgctgcaacctggacggctcgggcagggaggtggtggtgaagggctctctg
ccgcacccgttcgcgctgacgctgtacgaggaaacgctcttctggacggactggaacaca
cactccatccacgcctgcctcaaacacacgggagagaacagccacgagatccacaccaac
atcttctcacccatggacatacacgtctacagccaagagcggcagccgctggaggtgacg
agtacctgcgctctgaagaatggaggatgttctcatctgtgtctgctatctccagtcaaa
ccttattaccagtgcgcctgtccgaccggcgtccagctactggacgacaacaagacctgc
agagatggtgccactcagctgctgcttctggcgcggcgcacagacctgcggcggatctct
cttgacacgccagacttcaccgacatcgtgctgcagaccgacgacatccggcacgccatc
gccatcgacttcgacccggtggagggacacatctactggacggacgacgaggtgcaggcc
atccgcaggtcccgcctggacgggagcgaggctcagttcgtggtgacctcgcaggtgaat
catccggacgggatcgccgtggactggatcgcacggaacctgtactggaccgacaccggc
acggaccggatcgaggtgacgcggctgaacggaagcatgaggaagatcctgatctcggag
gagctggacgagccgagggccatcgtgctggaccccgccgccggatgttcatgtgctgct
gtgtgtgactgctgctgctcagtcatgctggatggtagtttggcagtttctgctgcttct
cagaccatcagtcgtgcgttcatgaacggcagcgctctggagcacgtggtggagttcggt
ctggactatcccgagggaatggccgtggactggctgggaaagaacctgtactgggccgac
acggggaccaaccgcatcgaggtggccaaactggacgggcagcacagacaggttctggtg
tggaaggatctggacagccctcgagcactggcactggacccggccgagggcttcatgtac
tggacagagtggggtggacggccgaagatcgaccgcgcggccatggacggttctggacgc
atcactctggtgccgaatgtgggccgcgcgaacggactgaccatcgactacaccgagcgg
cggctgtactggacggacctcgacaccacgctgatcgagtcctccaacatgctgggtctg
gagcgtgaggtgatcgctgacgatctgccgcatccgttcggactcacacagtaccaggac
tacatctactggactgactggagccagcgcagcatcgaacgggccaacaagaccagcggg
cagaaccgcaccgtcatacagggccacctggactacgtcatggacatcctggtgttccac
tcgtccagacagagcggctggaacgcctgcgcctccaccaacggtcactgctcgcacctg
tgtctggctgttcctgtcagcagcttcgtgtgcggctgccccgcgcattactcactcaac
tacgacaacaagacctgcagcgcgcccacatccttcctgctgttcagtcagaagacagcc
atcaaccgcatggtcatcgacgagctgcagagccccgacatcatgctgcccatccacagc
ctcagaaacgtgcgcgccatcgactacgacccgctcgaccgccagctgtactggatcgac
tccaagcagaacgccatccgccgcgcgcaggaggacgggaaccagagcgagacggtggtg
tccagcgcgagcctcggcctgcagccctacgacctcagcatcgacgtctacagccgcttc
atctactggaccagcgaagtgaccaacgtcatcaacgtcacgcgcatcgacgggtcacgg
gtcggcgtggtgctgcgcggagaacacgacaaaccccgcgccatcgtggtcaatccagag
cgagggtacatgtacttcaccaatctgcaggagcgttctccgaagatcgagcgcgccgct
ctggacgggacggagcgcgaggtgctgttcttcagtaatctgggcaagccggtcgctctg
gccgtcgacaacgagctgggaaaactcttctgggtcgacatggacctgaggcgcatcgag
agcagcgacctgtccggagccaatcgcatcgtgatcgaggactccaacatcctgcagccg
gtgggtctgacggtgtttgggaacttcctgtactggatcgaccggcagcagcagatgatc
gagcgcatcgataagatcacgcgcgagggacgcaccaagatccaggcgcgcatcgcctct
ctgagcgacatccacgccgtccacgagctgcgcatggaggagtacaataaacacccctgc
acgtctgataacggcggctgctcgcacatctgtctggtgaagggagacggatccacgcgc
tgctcgtgtccggttcacctggtgctgctgcaggacgagctctcctgcggagagccgccc
acgtgttccccggagcagttctcctgtgtgtccggcgaggtggactgtatcccgcaggcc
tggcgctgcgacggcttcgctgagtgtgacgacagcagcgacgagcgagactgtcccgtc
tgctccgaggaggagttccagtgcgacagcaagcagtgcgtggacttttctctgcgctgc
aacggagaaatcaactgccaggaccgatccgatgagaacaaatgtgaagttctctgtccc
atggatcagttcacctgcgccaacggccagtgcatcgggcggcacaagaagtgtgaccac
aacacggactgcacagacaactcggacgagatcggctgctacgcgactgaagagccgtcc
tttcctcccacgaacaccatcggctctatcgtgggtgtggtgatgctgctgttcgtggtg
ggcgctgtgtatttcgtgtgccagcgtgtgctgtgtcctcagatgaaggacgacggcgag
accatgaccaatgacttcgtggtgcacgggccgccgccggtgcctctgggatacgtgcct
caccccggctctctgagcggctcgctgccaggcatgtctcgtgggaagtcggtcatcggc
tcgctgagcatcatgggaggcagcagcggtcctccgtatgatcgagcacatgtgaccgga
gcctcgtccagcagctcctccagcaccaagggcccatactttcctccgatcctgaatccc
cctccgtctcccgccacagtgaggtcgcagtatacgatggagttcggttactcgtcgaac
agcccgtcgacgcaccgatcgtacagctacaggccgtacaattaccgtcacttcgcccct
ccgacgacgccctgcagcacagacgtgtgcgacagcgactacacgccgggccgaagggct
ccgcacgcatccagcgccgccgccaagggctacaccagcgacctgaactacgactcggag
ccgctaccaccgccgcccaccccacgcagccagtacctgtctgcagaggagaactgtgag
agctgcccgccgtcgccctacaccgagcgcagctactcacaccacctgtacccgccgccg
ccctcgccctgcacggactcatcctga
DBGET
integrated database retrieval system
