Sinocyclocheilus grahami (golden-line barbel): 107570162
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Entry
107570162 CDS
T04918
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04150
mTOR signaling pathway
sgh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107570162
04150 mTOR signaling pathway
107570162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107570162
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107570162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
DUF5050
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
107570162
NCBI-ProteinID:
XP_016111849
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MGNKLYWTDSETNRIEVAELDGTHRKVLFWQDLDQPRAIALDPARGYMYWTDWGEIPKIE
RAGMDGTHRSVLIDSEIYWPNGLTLDYDLQKLYWADAKFSFIHRCNLDGSGREVVVKGSL
PHPFALTLYEETLFWTDWNTHSIHACLKHTGENSHEIHTNIFSPMDIHVYSQERQPLEVT
STCALKNGGCSHLCLLSPVKPYYQCACPTGVQLLDDNKTCRDGATQLLLLARRTDLRRIS
LDTPDFTDIVLQTDDIRHAIAIDFDPVEGHIYWTDDEVQAIRRSRLDGSEAQFVVTSQVN
HPDGIAVDWIARNLYWTDTGTDRIEVTRLNGSMRKILISEELDEPRAIVLDPAAGCSCAA
VCDCCCSVMLDGSLAVSAASQTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD
TGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRAAMDGSGR
ITLVPNVGRANGLTIDYTERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFGLTQYQD
YIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQSGWNACASTNGHCSHL
CLAVPVSSFVCGCPAHYSLNYDNKTCSAPTSFLLFSQKTAINRMVIDELQSPDIMLPIHS
LRNVRAIDYDPLDRQLYWIDSKQNAIRRAQEDGNQSETVVSSASLGLQPYDLSIDVYSRF
IYWTSEVTNVINVTRIDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQERSPKIERAA
LDGTEREVLFFSNLGKPVALAVDNELGKLFWVDMDLRRIESSDLSGANRIVIEDSNILQP
VGLTVFGNFLYWIDRQQQMIERIDKITREGRTKIQARIASLSDIHAVHELRMEEYNKHPC
TSDNGGCSHICLVKGDGSTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCVSGEVDCIPQA
WRCDGFAECDDSSDERDCPVCSEEEFQCDSKQCVDFSLRCNGEINCQDRSDENKCEVLCP
MDQFTCANGQCIGRHKKCDHNTDCTDNSDEIGCYATEEPSFPPTNTIGSIVGVVMLLFVV
GAVYFVCQRVLCPQMKDDGETMTNDFVVHGPPPVPLGYVPHPGSLSGSLPGMSRGKSVIG
SLSIMGGSSGPPYDRAHVTGASSSSSSSTKGPYFPPILNPPPSPATVRSQYTMEFGYSSN
SPSTHRSYSYRPYNYRHFAPPTTPCSTDVCDSDYTPGRRAPHASSAAAKGYTSDLNYDSE
PLPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagctctactggaccgactccgagaccaatcggatagaagtggccgagctg
gacgggacgcaccggaaagtgttgttctggcaggatctggaccagccgagagccatcgct
ctggatccggcccgagggtacatgtattggacggattggggtgagatcccgaagatcgag
cgcgctgggatggacgggacgcatcgctcggtcctcatcgactctgagatatactggccc
aacggcctgacgctcgactacgacctgcagaaactctactgggccgacgccaagttcagc
ttcatccaccgctgcaacctggacggctcgggcagggaggtggtggtgaagggctctctg
ccgcacccgttcgcgctgacgctgtacgaggaaacgctcttctggacggactggaacaca
cactccatccacgcctgcctcaaacacacgggagagaacagccacgagatccacaccaac
atcttctcacccatggacatacacgtctacagccaagagcggcagccgctggaggtgacg
agtacctgcgctctgaagaatggaggatgttctcatctgtgtctgctatctccagtcaaa
ccttattaccagtgcgcctgtccgaccggcgtccagctactggacgacaacaagacctgc
agagatggtgccactcagctgctgcttctggcgcggcgcacagacctgcggcggatctct
cttgacacgccagacttcaccgacatcgtgctgcagaccgacgacatccggcacgccatc
gccatcgacttcgacccggtggagggacacatctactggacggacgacgaggtgcaggcc
atccgcaggtcccgcctggacgggagcgaggctcagttcgtggtgacctcgcaggtgaat
catccggacgggatcgccgtggactggatcgcacggaacctgtactggaccgacaccggc
acggaccggatcgaggtgacgcggctgaacggaagcatgaggaagatcctgatctcggag
gagctggacgagccgagggccatcgtgctggaccccgccgccggatgttcatgtgctgct
gtgtgtgactgctgctgctcagtcatgctggatggtagtttggcagtttctgctgcttct
cagaccatcagtcgtgcgttcatgaacggcagcgctctggagcacgtggtggagttcggt
ctggactatcccgagggaatggccgtggactggctgggaaagaacctgtactgggccgac
acggggaccaaccgcatcgaggtggccaaactggacgggcagcacagacaggttctggtg
tggaaggatctggacagccctcgagcactggcactggacccggccgagggcttcatgtac
tggacagagtggggtggacggccgaagatcgaccgcgcggccatggacggttctggacgc
atcactctggtgccgaatgtgggccgcgcgaacggactgaccatcgactacaccgagcgg
cggctgtactggacggacctcgacaccacgctgatcgagtcctccaacatgctgggtctg
gagcgtgaggtgatcgctgacgatctgccgcatccgttcggactcacacagtaccaggac
tacatctactggactgactggagccagcgcagcatcgaacgggccaacaagaccagcggg
cagaaccgcaccgtcatacagggccacctggactacgtcatggacatcctggtgttccac
tcgtccagacagagcggctggaacgcctgcgcctccaccaacggtcactgctcgcacctg
tgtctggctgttcctgtcagcagcttcgtgtgcggctgccccgcgcattactcactcaac
tacgacaacaagacctgcagcgcgcccacatccttcctgctgttcagtcagaagacagcc
atcaaccgcatggtcatcgacgagctgcagagccccgacatcatgctgcccatccacagc
ctcagaaacgtgcgcgccatcgactacgacccgctcgaccgccagctgtactggatcgac
tccaagcagaacgccatccgccgcgcgcaggaggacgggaaccagagcgagacggtggtg
tccagcgcgagcctcggcctgcagccctacgacctcagcatcgacgtctacagccgcttc
atctactggaccagcgaagtgaccaacgtcatcaacgtcacgcgcatcgacgggtcacgg
gtcggcgtggtgctgcgcggagaacacgacaaaccccgcgccatcgtggtcaatccagag
cgagggtacatgtacttcaccaatctgcaggagcgttctccgaagatcgagcgcgccgct
ctggacgggacggagcgcgaggtgctgttcttcagtaatctgggcaagccggtcgctctg
gccgtcgacaacgagctgggaaaactcttctgggtcgacatggacctgaggcgcatcgag
agcagcgacctgtccggagccaatcgcatcgtgatcgaggactccaacatcctgcagccg
gtgggtctgacggtgtttgggaacttcctgtactggatcgaccggcagcagcagatgatc
gagcgcatcgataagatcacgcgcgagggacgcaccaagatccaggcgcgcatcgcctct
ctgagcgacatccacgccgtccacgagctgcgcatggaggagtacaataaacacccctgc
acgtctgataacggcggctgctcgcacatctgtctggtgaagggagacggatccacgcgc
tgctcgtgtccggttcacctggtgctgctgcaggacgagctctcctgcggagagccgccc
acgtgttccccggagcagttctcctgtgtgtccggcgaggtggactgtatcccgcaggcc
tggcgctgcgacggcttcgctgagtgtgacgacagcagcgacgagcgagactgtcccgtc
tgctccgaggaggagttccagtgcgacagcaagcagtgcgtggacttttctctgcgctgc
aacggagaaatcaactgccaggaccgatccgatgagaacaaatgtgaagttctctgtccc
atggatcagttcacctgcgccaacggccagtgcatcgggcggcacaagaagtgtgaccac
aacacggactgcacagacaactcggacgagatcggctgctacgcgactgaagagccgtcc
tttcctcccacgaacaccatcggctctatcgtgggtgtggtgatgctgctgttcgtggtg
ggcgctgtgtatttcgtgtgccagcgtgtgctgtgtcctcagatgaaggacgacggcgag
accatgaccaatgacttcgtggtgcacgggccgccgccggtgcctctgggatacgtgcct
caccccggctctctgagcggctcgctgccaggcatgtctcgtgggaagtcggtcatcggc
tcgctgagcatcatgggaggcagcagcggtcctccgtatgatcgagcacatgtgaccgga
gcctcgtccagcagctcctccagcaccaagggcccatactttcctccgatcctgaatccc
cctccgtctcccgccacagtgaggtcgcagtatacgatggagttcggttactcgtcgaac
agcccgtcgacgcaccgatcgtacagctacaggccgtacaattaccgtcacttcgcccct
ccgacgacgccctgcagcacagacgtgtgcgacagcgactacacgccgggccgaagggct
ccgcacgcatccagcgccgccgccaagggctacaccagcgacctgaactacgactcggag
ccgctaccaccgccgcccaccccacgcagccagtacctgtctgcagaggagaactgtgag
agctgcccgccgtcgccctacaccgagcgcagctactcacaccacctgtacccgccgccg
ccctcgccctgcacggactcatcctga
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