Sinocyclocheilus grahami (golden-line barbel): 107570228
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Entry
107570228 CDS
T04918
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107570228 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107570228 (zcchc7)
03016 Transfer RNA biogenesis [BR:
sgh03016
]
107570228 (zcchc7)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107570228 (zcchc7)
Transfer RNA biogenesis [BR:
sgh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107570228 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107570228
NCBI-ProteinID:
XP_016111921
UniProt:
A0A672MNI9
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MFLWSPEAGVPVLQLGIYEQALLEMFSGYQEQDDYEDELYRDDADSSLSDADSELEFRLY
SQLHYSAEIQEDREDSREVQSSVPQTPTQRNTSPPAPPVDVIVIDSGPDATTVSDNTEED
DSVCAKKGQSSKRWNSKLLSACLPQVQAGKSSPDDIVVLDSDSDDSSSESVPAFVEDLDS
DSDGLENWMTLDWDKQDGDQSIQLNLSLPEYANDEGNKKNWTISEKDKWAQICNKGFGPR
RVSNRYYTEKSITCHNCSKSGHLSKNCPTTKKVPCCSLCGLQGHLLRTCPNRHCYNCSLP
GHTYDDCLERAYWHKRCRRCGMTGHFFDACPEIWRQYHLTTTNGPLRKPSDPNSCRKPAY
CYNCSKKGHFGHECTERRMYNGTYPTLPFISYYDTKKDMNCRNHRLKKQAKELQEAGLIS
PDGAFLTNTPQPPRKKQKTSHKQSPYTHNTHTNNQLTPKRSIAHTPKHHPQAHKQNTHLN
FKQSSQTPGNHGKHTPQSRFKPQKQSQKEAKKKTRSEGIVLDEDADFPRGCEKSPHTTRV
FSSPRKANVTPNKPFGLEKSNKKKTDKISKKERKWRKRQKTATKGSSAYPSDENLFLIKQ
RKV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtggagtccggaagcgggtgtccccgtgttgcaactcggaatttatgaacag
gctctccttgagatgttctcagggtatcaggagcaggatgactatgaggacgagctgtac
cgggatgatgcagactccagtttgtctgacgctgacagtgaactggagttccggctttat
tcccagctgcactacagcgctgagatccaggaggaccgtgaggactcgagagaggtccag
tcatcagtaccgcagactccaacacagcggaatacctcacctcctgctccacctgtagat
gttattgtgattgactctggcccagatgctaccacggtgtcagacaacacagaggaagat
gacagcgtctgtgctaagaaaggtcaatcatccaaacgctggaacagcaagttactttca
gcctgtctaccacaagttcaagcaggaaagagctccccagatgatattgtggtgttggat
tctgattcagacgacagctcttctgaatctgtacctgcttttgtggaggatctggattcg
gactcggatggactggagaactggatgactctggactgggacaaacaggatggagatcag
agcatccagctcaacctctccttaccagaatatgcaaatgatgaagggaataaaaagaac
tggactatatcagaaaaggataaatgggctcagatctgtaataaaggatttggcccgagg
cgtgtctcaaaccgttactacactgaaaaatccatcacgtgtcacaactgcagcaagtcc
ggccatctctccaaaaactgtcccacaacaaagaaggtgccatgctgctcattatgtggg
cttcagggacacttgctgaggacctgtccgaaccgtcactgttataactgctcattgcct
ggccacacctatgacgactgtctggagagagcttactggcacaaacgctgccgccgctgt
ggcatgaccggacatttctttgacgcctgcccagaaatctggagacagtaccaccttaca
accactaatggacccctccgcaagcccagtgatccaaattcctgcaggaagcctgcctac
tgctacaactgctctaagaaaggacacttcggccatgaatgcactgagaggagaatgtat
aacgggacgtatcccaccctgccatttatttcctattatgacacaaaaaaggacatgaat
tgccggaatcatcgacttaaaaagcaggccaaagaacttcaggaagccggattgatttca
cctgatggagctttccttacaaataccccccaaccgcccagaaagaaacaaaaaaccagc
cacaaacagtctccatacacacacaacactcacaccaacaaccagctcacgccgaagaga
agcatcgcacacacacccaaacaccacccacaagcgcacaaacagaacacacacttgaat
ttcaagcagagctcacaaacaccaggaaaccacggcaaacacacgcctcagagcaggttt
aaaccacaaaagcaaagccagaaagaagccaaaaagaaaacacgatctgaaggtatagtt
ttagatgaagacgcagactttcctagaggctgtgaaaagagcccccacacgacaagagtt
ttttcatcacctcgcaaagccaatgtgacgccgaataagccctttggactggaaaagagc
aataaaaagaaaacggataaaatatcaaaaaaggagaggaaatggagaaagagacaaaaa
acagctacaaaaggttcttccgcgtatccctccgatgaaaacctttttctgattaaacaa
agaaaggtatga
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