Sinocyclocheilus grahami (golden-line barbel): 107570768
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Entry
107570768 CDS
T04918
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
sgh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107570768
04120 Ubiquitin mediated proteolysis
107570768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107570768
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107570768
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
U-box type E3
107570768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
107570768
NCBI-ProteinID:
XP_016112516
UniProt:
A0A672M250
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAVGQTSQPSTPLTSPQRETPPGPLPGPSGASSQPVPPAPSHTL
GLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASC
EKSMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSSSDVSEEQALHLICKILRVSWKEQ
DRDVIFLPSLAAEFQKNPRDVYSDFKDLIGQILMEALMMSTRSRDCNPFASLTATSQPIT
AARSPDRHLTLVPPSSQSGSPMMPCAGSFGASSLSSLYGCSPNPLALSSARMSAPSVPLA
SAAALPVPPSPPVSRPPTSLPPPSLSTPLPISQRYRPYSLSSSIPISPSPRSTPSGMLTP
TTSGIPSSPSPRHHSTHTSMPFPIFPSSPSTMARRTALAARMPSSPFSLLFFALSDLPQD
SSDEELEEEEEEDFSRVQFGSSLGASGGGMTGDSGSDRFTIESCKETEMLNYLIERFDSV
GMEERKAPKMCSQPPVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPSLLVPYMLCRNL
PYGFIQELVRMTHQEEEVFKQIFVPILQGLALAVKECSFDSDNFKFPLMALAELCEIKFG
KTHPVCNLITSLSLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKYFSGPAI
TMENTRVVSQSLQHYLECARGELFKILHNILLNGETREAALSYMAALVNRNVKKAQMQTD
DKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHPKCRLNVSPEETRLNATMEELKSW
LAELHEDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELKNSE
NQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLRFFSMVIQLILRM
MDPAYPHVTLPLNPEIPKSFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTEDIVTFLVV
FICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHPLSVNQLVPALMKFYTDV
EHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLINDTTFL
LDESLESLKRIHEVQEEMKNKEQWDQLPREQQQSRQSQLTQDERVSRSYLALATETVDMF
HILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTD
IYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVAR
NSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRAIILRHLLNSPTDPFNRQPLTE
SMLEPVPELKERIQAWMREKQTGRV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcgactggcccggttagctgtaggg
cagacgtcacagcccagcacccctttgacatccccacagagagagactcctccagggccc
ttgccagggccctccggggcctcatcacagcctgtcccaccagctccatctcacactctg
ggcctaaatgcccaaaatgtcacccctgccacctctcctatgggggcctcgggggttgct
taccgcagccagagcagcgaaggggtcagctctctctccagctctccatctaacagtctg
gagacgcagtcccaatccctgtcccgctcccagagcatggacattgacacagcctcctgc
gagaagagcatgtctcaagtagatgtggactcaggaattgagaatatggaggtggaagac
agtgatcgcagagagaaaaggaacctggctgaaaaggattcctcatccagttctgacgtc
tctgaagagcaggctttgcacctcatctgtaagatcttgcgtgtctcttggaaggagcag
gaccgtgatgtcatcttcctcccctcacttgctgctgaattccagaagaaccctagggat
gtttactctgacttcaaagacctgatcggacagattttaatggaggctctaatgatgtcc
acccgatcacgtgactgtaacccattcgccagcttgaccgccacatctcagccaattacc
gctgccagatccccggaccgtcacctgactcttgtcccaccctccagccagagcggcagt
cccatgatgccctgtgctggttcattcggtgccagctctctttccagtctttacggttgt
agcccaaacccactcgctctgagctctgccagaatgagtgctccatctgtcccactggct
tctgcagccgccctcccggttcccccaagtcctcctgtctctcgcccacccaccagcctt
ccgcctccctctctatccacccctctgcccatctcccagagatacaggccctactcgctt
agctcgtccatccccataagcccaagccccaggtctactccatctggtatgcttacgcca
acaacttcaggtataccctccagcccttccccaagacaccatagcacccacacctccatg
cctttccccatcttccccagctctcccagcactatggccagaaggactgcgctagccgcc
cggatgccctctagccctttctccctcctcttcttcgccctgtccgacttgcctcaggac
agcagtgatgaagagctggaggaagaggaagaggaggatttttcaagggttcagtttggg
tccagcctgggcgcatccggaggggggatgactggtgactcaggtagcgaccgctttacc
atagagtcctgtaaagagacagagatgctcaactacctcatcgagcgttttgacagtgtg
ggaatggaagagaggaaggccccaaagatgtgcagccagccacctgtcagtcagctgctt
agcaacattcgttcccagtgcatttcccatgctgcactagtgcttcaaggtgccctcaca
cagcccagggcccctctacagccgtccctgctggttccctacatgctgtgccggaacctt
ccgtatggcttcatccaggagttggtgcgcatgactcaccaggaggaggaggtgtttaaa
cagatcttcgttcccattcttcaagggctcgctttagctgtaaaagaatgttcttttgac
agtgacaacttcaagttccctctgatggctttggccgagctctgtgaaatcaagtttggg
aagactcaccctgtatgcaatttgatcacctctctgtcattgtggtgtcctgaccctctc
agtcccgggacaggaagagaaatccaaagactctccttccttggagcgttctttagtctt
tctgtgtttgctgaggatgatactaaagtgggagacaagtacttctcaggccctgccatc
acaatggagaacacccgtgtggtcagccagtcactgcagcattatttggagtgtgcaagg
ggagagctgtttaaaatcctgcacaacatcttgttgaacggagagacaagggaagcagct
ctgagctacatggcagctctggtgaatcgtaatgtgaagaaggctcaaatgcagaccgat
gataagctggtgtccacagacggcttcatgatgaacttcctgtgggtgctgcagcaactc
agtatgaagatcaagcttgaaacagtggatcctctctacatcttccaccccaagtgtcgg
ctgaatgtcagcccggaagagacccggctcaatgccacgatggaggaactgaagagctgg
ctcgctgagctgcatgaagacccgtccaagttctcagagcccaagttccctacagagtgc
ttcttcttaacgctacacgcacatcatctgtccatcctcccgtgctgtcggcgctacata
cggaggctgagggccatcagggatctgaacagaactgtggaagagctgaagaacagtgag
aaccagtggaaggattccccgttggcaagtcgtcatcgggaaatgctgaagagatgtaaa
acacagctgaagaaactggtgcgctctaaagcctgcgcagacgctgggctgctggacgag
aacctgctgcgcagatgtctgcggttcttcagtatggtcatccagctcatcttgcgtatg
atggatcctgcctacccacacgtaaccctgcctctgaacccagaaatccccaaaagcttt
gcagcactgccggagttttacattgaagatgtggccgagtttttgctttttattgtgcag
tactttccacaggttctctatgagccatgcactgaagacattgtgaccttcctggtggtc
ttcatttgcagtcagaattacataaagaacccatacttgattgccaagctggtggaggtg
ctgtttgtcaccaaccctgcggtgcagccgcgcactcagcgtttctttgagatgatggag
aaccacccactgtctgtcaatcagcttgtgccagccctcatgaagttttacactgatgtg
gagcacactggagccacaagcgagttctatgacaagttcacaatccgttaccacatcagc
accatattcaaaagcctatggcaaaacattaaccaccaaggcaccttcctggaggagttc
aactctggtaaacagtttgtgcgctacatcaacatgctaattaacgatacaacttttctg
ctggacgagagtttggagtctctgaaacgcatccatgaggtccaggaggagatgaagaat
aaagagcaatgggaccagctgcccagggagcagcagcagagccgacagtcccagctgact
caggatgagagagtatcacgatcgtacctggctttagcaacagagacagtggatatgttc
catatcctcaccaaacaggtccagaagcccttcctcaggcctgaactgggtcctcgtctg
gctgccatgttgaattataacctgcagcagctatgtgggcctaaatgtcgagacttgaag
gtggaaaacccagaaaaatatggttttgagccaaagaagctcctggatcagctcactgac
atttatctgcagctggactgtgcccgatttgctaaagccattgcagatgaccagcgatca
tacagcagggagctgtttgaggaggtcatttcaaaaatgagaaaagcgggcataaaatcc
accattgctattgagaaattcaaactgctgttggagaaggtggaggaaatagtagcccga
aattctcagtctgagatggattacagtgatgccccagatgagtttaaagacccactgatg
gacactctcatgactgatcccgtgcaacttccctctggcaacatcatggatcgagccatc
attctgcgacacctcctgaactctcccactgaccccttcaacagacagcctctcactgag
agcatgctggaaccagtcccagagctgaaggagcgtatccaggcttggatgagagagaag
cagactggccgtgtttga
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integrated database retrieval system
