Sinocyclocheilus grahami (golden-line barbel): 107571953
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Entry
107571953 CDS
T04918
Name
(RefSeq) cysteine protease ATG4D-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04136
Autophagy - other
sgh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107571953
04136 Autophagy - other
107571953
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107571953
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107571953
03029 Mitochondrial biogenesis [BR:
sgh03029
]
107571953
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107571953
Membrane trafficking [BR:
sgh04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107571953
Mitochondrial biogenesis [BR:
sgh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107571953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
107571953
NCBI-ProteinID:
XP_016113830
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MDVSDEFDSGMEPTDELASFEMVNLSNPGLLEVDGHIQESKDKAKLKTKLISAWNNLRYG
GWSLKGKPRLSKSSPVCLLGQSYQLSYSGERESFRWAFSSLLWMTYRRGFPPLDGSALTS
DAGWGCMLRSAQMLLAHGLMLHTMPAGWTWPATHHQTKDDLEVLDDSLRESRRDSGKPRR
RSLGTTLDCEAQEELTHRRTVSWFGDLSSAPFGLHRLVELGRASGKRAGDWYGSAIVAHI
LQKAVAASEVSDLAVYVAQDCTVYVGDVLNLCGTSRTDLSARCRSGWKSLVLLVPVRLGS
EVLNLAYTQCVKRLLELQCCMGIIGGKPKHSLFFVGFQDDHLIYLDPHYCQTTVDVQQDN
FPLESFHCKTVRKMPFNRMDPSCTVGFYAASRGDFQTLCSDVTEALTSSEEKYPIFTFVE
GHNNAERSCTSDSVTHIKTKDRLGRIKKKSCLDEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgagtgatgagttcgacagcgggatggagcccacagatgagctcgcgtcgttt
gagatggtcaacctgtcgaacccgggcctgctggaagtcgacggacacatccaggagtca
aaagacaaggccaaactcaaaaccaaactcatttcagcgtggaataacctcagatatgga
ggctggtctctgaagggcaagccgcgtctcagtaagagcagtcccgtgtgtctgctggga
cagtcctatcagctgagctacagcggagagcgggagagttttcggtgggcgttctcctct
ctgctgtggatgacctacaggagaggtttccctccgctggacggctcggcgctcacgtct
gacgcgggatggggctgcatgctccgcagcgcacagatgctgttagctcacggactaatg
ctgcacacgatgcccgcgggctggacgtggcctgcgacccatcatcagaccaaagatgac
ctggaggtgctggacgattccctcagagagagccggcgtgactcgggaaaacctcgcaga
cgcagtctgggaaccacgttagactgcgaggctcaggaggagctgactcacaggaggacc
gtgtcctggttcggcgatctgtcctccgccccgttcggtctgcaccggctggtggagttg
ggccgggcctctgggaagagggcgggcgactggtacggatcggccatcgtggcccacata
ctgcagaaggctgtggcagcgtccgaggtgtccgatctggcggtgtacgtggcacaggat
tgcacagtgtacgttggagacgtgttaaacctttgcgggacgtcccgtacggatctctca
gcgaggtgtaggtctggctggaagtcgctggttctgctggtgcctgtgcgtttggggtcg
gaagtgttgaatctggcttacacccaatgtgtcaagaggttgctggagctgcagtgctgc
atgggaatcatcggagggaaacccaaacactcgctgtttttcgtgggattccaggatgat
catctgatctatttggatcctcattactgtcaaactacggtagacgtccagcaagacaac
ttccctttagagtcgtttcactgtaaaactgtcaggaagatgccgtttaaccgcatggac
ccgagctgtacggtgggtttctacgccgccagcaggggggatttccagactctgtgctca
gacgtcactgaggctctgacatcatcggaggaaaagtaccccatcttcacatttgtggag
ggtcacaataacgcagagagaagctgtacgtcagactcagtcactcatataaagaccaaa
gaccgactgggccgaatcaaaaagaaaagctgtttggatgaatttgtgctcctgtga
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