Sinocyclocheilus grahami (golden-line barbel): 107571978
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Entry
107571978 CDS
T04918
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107571978 (pcdh19)
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107571978 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
107571978
NCBI-ProteinID:
XP_016113863
UniProt:
A0A672NAA0
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MHSKDMDLIQMFLCFLLCWTGVDAVFNLKYTVEEELRAGTKIANVTADAKVAGFALGNRQ
PYLRVISNSEPRWVNLSPAGLLITKQKIDRDAVCRQTPKCFISLEVMSNSMEICVIKIEI
IDVNDNAPRFPTNHIDIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIK
TRGDGSKIAELVVEKTLDRETQSRYTFEFTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFD
EPVYTVNLLENSPINTLVVDLNATDPDEGTNGEVIYSFINLVSNLTKQMFKIGLKTGVIT
VNGVLDHEELSVHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVS
ENAPLGYVIALVRVSDSDSGANGKVQCRLQGNVPFRLNEFESFSTLLVDGRLDREQRDMY
NLTILAEDSGYPPLRSSKSFAVKVTDENDNPPYFTKPHYQAMVLENNVPGAFLLAVSARD
PDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYGVRAFNHEDTRTFEFKVTAKDGGD
PPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGYLVTQIKADDYDEGEN
GRLTYSISEGDMAYFEIDQINGEVRTTKTFAENAKPSYQITVVAHDHGQTSLSASAYIII
YLSPNLNAQEQIGPVNLSLIFIIALGSIAVILFVTMIFVAVKCKRDNKEIRTYNCSFLYL
RRVAEYSYGNQKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLP
LGCRRSESTFLNVENQNSRNAAPNHGYHHTTFTGQGPQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKSTSTFKDMEGNSLKDSGHEESDQTDSEHDVQRGHYADTAVNDVLNMTVPS
NNSQLPDQDQSEGFHCQDECRILGHSDRCWMPRVPVPARAKSPEHGRNVIALSIEATTVD
VPHYEDCGTTKRTFATFGKDGPDEERAEQRGRRQTAEPAVCSPKTNGTVREAGNGREAVS
PITSPVHLKSPQSKPSSTYNTLKCRDAERIANHSLLRQPEGKDSEPAMREINTLLQDGRE
KESPGSKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcattccaaggacatggatttaatacaaatgtttttgtgctttctcttgtgctggact
ggagtcgatgccgttttcaatttgaaatacacagtggaagaagagctgcgtgcaggcaca
aagatagccaacgtgacggcggacgcaaaagttgcgggttttgcactgggaaaccgacag
ccttatttgcgggttatctccaattccgagccccggtgggttaatctgagccccgccgga
ctgctcatcacaaagcaaaaaattgatcgggacgctgtttgccgacagacaccgaagtgt
tttatttctttggaagtgatgtcgaactcgatggagatctgcgtgattaaaattgagatt
atcgacgtaaacgacaacgcgccgcgcttccccactaaccacatcgacatagaaatctcg
gaaaacgccgctcccggtaccagatttcccctagagggggcaagcgatccggactctggg
agcaacggcattcagacgtacacaattacccctaatgatattttcggtcttgagattaag
acgaggggagacgggtccaaaatagcagaacttgtggtggaaaagactttagacagagag
acgcagtctcgttacacgtttgaatttacagcggaggatggtggagaccccccaaagtcc
gggactgtgcaacttaacataaaagtaattgactcgaacgataacaaccccgttttcgat
gagccagtgtacactgtaaacctgctggagaattctcccattaacacgttagtcgtagac
ttgaacgctacggacccagacgaaggaaccaatggcgaggtgatctactcattcataaac
ttggtctccaacctaaccaaacaaatgtttaaaatcggcctcaaaacaggcgtgataaca
gtgaatggcgttttggaccacgaggaattgtccgtccacgaaattgatgtacaagccaaa
gatctgggtccaaattcaatccctgcccactgcaaagtgattgttaatgtaatcgacata
aacgacaacgcgccagaaatcaaactgttgtcagaaaacagcgagatggtggaggtgagc
gaaaacgctcctctcggatatgtaatagctctggtgagagtctcagacagtgattcggga
gcgaatggaaaagtgcagtgcagactgcagggcaatgtgccttttagactcaacgagttt
gagagcttctccaccttacttgttgatggccgtctggatagggagcagagagacatgtac
aatttgaccattctagccgaggacagcgggtatcccccgctcagaagctcaaaatctttt
gcagtgaaagtaacggatgaaaacgacaatcccccgtacttcaccaagccgcattatcaa
gccatggtcctcgaaaataacgtcccaggtgcgtttctgctggcggtgtccgccagggac
cctgacctgggcatgaacggcaccgtgtcctacgaaatcatcaaatcggaggtgcggggc
atgtctgtggaatcttacgttaccgtgaactcaaacggcgaaatctacggcgttagggct
tttaatcacgaagatacgcggacctttgagtttaaagtcactgcaaaggatgggggagat
ccacctttgaccagcaacgccaccgtgcgcattgttgtactggatgtaaatgacaacaca
cctgtgatgaccaccccgcccctggtgaacggcacggcggaggtgtccattcctaaaaat
gctggagttggctatttggttacacaaataaaagctgatgattacgatgagggggaaaat
ggaaggttaacttattcaatttcagaaggagacatggcatactttgaaatagatcagata
aacggcgaggtgcgaaccacaaagacgtttgcggagaatgcgaaaccatcctatcaaata
accgtggtggcgcacgaccacggccaaacttctctatctgcctctgcctatattatcatt
tatctctctcctaatctcaatgcacaggagcaaatcggacccgtcaacctgtctctcatt
ttcatcattgccctgggttctattgcagttatcctgtttgtcacaatgatctttgtggca
gtcaagtgcaaaagggataacaaggaaatccgaacatacaactgcagtttcttgtacctg
cgcagggtggcggagtactcctatggcaaccagaagtccagcaagaagaagaagctgagc
aagaacgacatccgcctggtgccgcgggacgtggaggagacggacaagatgaatgtggtg
agttgctcgtctctcacctcttcgctcaactacttcgactaccaccagcagactctgccg
ctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactccaggaat
gctgcacccaaccatggctaccaccataccaccttcacagggcagggccctcagcagcct
gacctcatcatcaacggcatgccgctgcctgagacggagaattattccattgactcaagt
tatgtaaacagcagagcacacctaattaaaagcacgtcaacattcaaggacatggaagga
aacagtctgaaggacagtggccatgaggagagtgaccaaaccgacagcgaacatgacgtt
cagagagggcactatgccgacacagctgtcaatgacgtactaaatatgaccgtaccctcc
aacaactcgcagctacctgaccaagatcagtcagagggtttccactgccaagatgaatgt
cgtatcctgggccactctgaccgctgctggatgccccgggtgcctgtgccggcaagagcc
aagtctcctgaacacggccgcaatgtcatcgctctgtctatcgaggccaccaccgtagac
gtacctcactatgaggactgtggcaccaccaaaaggacttttgccacctttggcaaagac
gggccagatgaggagcgggccgaacagaggggcagacggcaaacggcagagccggccgtc
tgcagccccaagaccaacggcaccgtgcgtgaagccggaaacggccgggaggccgtcagc
cccatcacctccccagtgcacctgaagagtccccagtccaaaccatcctccacctacaac
acgctgaaatgcagagacgcagagcgcatagccaaccacagcctgctgcggcagccggag
gggaaagacagtgagccggccatgcgggagatcaacacgctcctgcaggacggccgtgag
aaggagtcccctggcagcaaacggctgaaagacattgtgctttaa
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