Sinocyclocheilus grahami (golden-line barbel): 107572292
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Entry
107572292 CDS
T04918
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107572292
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107572292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
107572292
NCBI-ProteinID:
XP_016114236
UniProt:
A0A672KF11
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRDTMCRQNSKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSEQIDIDISENAAPGTRFPLAAAYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPPGMVLIDLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQDKID
FEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAAAPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLDENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGSPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATSLKPQ
PLEQEEDCVNCTEECRVLGHSDRCWMPQFPAGAGVAGTPQAEGSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCSTGSPCSSAKGMGDGAEGKPGTSHYGPPDGQYISPNKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMDSVLEQGRGEMGRSTMDAGQVVRDIDKLLQDCRGNENTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacgttgaaaaac
ttgaactactcaatacctgaggagaaaattcagggcgtcattggaaacattgccaaggat
gcggagctggaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactcc
gccccacaccttattgatgtggatcctgaaagcgggctattatacactaaacagcggatc
gacagggatacaatgtgcagacaaaactccaagtgccagctctccatggaagtgtttgcc
aacgacaaagagatctgcatgattaaagttgagatacaggacataaatgacaacgcacca
agctttccttctgaacagatcgatatcgacatatctgagaacgcagccccaggcacacgt
ttccccttggctgctgcctatgaccctgacactaaggagaacggcctgaaaacatatcag
atcacgcgggatgattatagcatattctctttggatgttaaatccagaggggatggaacc
aaattccctgaattggtcgttcagaggtccttagatcgtgaggaacgtagccatcacact
ttaattataactgccacagatggaggggaatatcccaaatcaggcacaatgcaaattaat
gtgaaagtaactgattccaatgacaacagccctgtgtttgaacagccctcatatgtagtg
gagatccctgagaattcacccccaggcatggtactgatagatttaaatgctaccgatcct
gatgaagggattaatgggcaggttacttattcctttagctgttatgttccagacaggatc
aaagagttgttctcaatagacccccgaacgggtgtcataaagattcaggataaaatcgac
tttgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaaccca
attcctggccattgtaaagtcaccgttaaagtgcttgacaggaatgacaactggccatcg
ataggtttcgtagctgtgcgtcagggggcggttagtgaagcagcagccccagggacagtg
atcgcactcgtcagagtcacagacaaagattcgggccgcaatgggcagctccagtgtagg
attttggggaacgttcccttcaagctggatgagaactatgataacttctacacagtagtg
accgacagacccttggacagggaggtaaaggatgagtataacatcactattgtggccaaa
gacaatggcagcccacccctgaactcaacaaagtctttcactgttaagatcttagatgaa
aacgacaatgcaccccgcttcacaaaaatggtctaccttctccaggtgcctgaaaacaac
atcccaggggaatacctgggttctgttcttgctcatgacccagatttgggccaaaatggt
actgtatcctattccctccttccttcgaatgtaagcgaggagtctatcactacatatgtt
aacatcaaacccactgatggtgcaatttatgccctgaggagtttcaactatgaacaaacc
aagtattttgacttcaaggtccaggcgaaagattcaggtaaccctcacctggagagcaac
accactgtccgtgtcagcgtgctggatgttaatgataacattcctgtcattgtccttccg
ttacttcagaatgacactgctgagatccatgtgcctcggaacgtgggagtcggacacatt
atcaccaccgtgagagcggtggacaatgattttggtgagagtggtcgcctcacctacgag
atctcagatggcaatgaggaacacttattcgagattgattcggtgacgggtgaggtacgg
acagcccagccactgtgggaggaggtggcacctgttgtggaactcatcatcaaggtgact
gaccatggcaagccgtcactgtctgccatggcgaaacttattgtcaaagcctactccggg
cccttaccagagggtgaaccgcgcattaacgcagaacaccataactgggacatgtcgctc
ccgctaatagtaaccctgagtatcatctcaattatgctccttgctgccatgatcaccata
gcagtcaagtgtaaacgggaaaacaaggagatccgcacatacaactgtcggatcgcagag
tacactcacccacaacttggcaagggcaagaagaagaagatcaacaagaatgatatcatg
ctggtgcagagcgaagtggaggagcgggacaccatgaacgtgatgaacgttgtcagcagt
ccctccctggccacctctcccatgtacttcgactaccaaactcgtctgcccctcagctct
cctaggtcagaggtcatgtacctcaaacccaccgccaacaacctcagtgttcctcaaggg
cacgttggctgtcacaccagcttcacgggacctgttacaaacaccaccgagacgccagtg
aacaggatgtcaataattcagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacgttcaaagatccagagcgagccagtcttaga
gacagcggccacggggacagcgaccaagcggatagtgatcaggacactaataaaggctcc
tgctgtgacatgtctgctaaggaagcgctcaagatgaaggccactagcctgaagcctcaa
ccacttgagcaggaggaggattgtgtgaactgcacggaggagtgtcgagtgctgggtcat
tctgaccgttgctggatgccccagtttcctgcaggggctggagtagcaggaactccccaa
gccgagggctcggactaccgcaccaacctcttcgtaccggccggcatggaggcagtcgca
gtggaaaccgaaacttacgagacggtgtgcaaccccaacggcaaaaaaacattctgcaca
tttgggaaggagcgtcgagaccacaccatcctcgtggcgaatgttaaaccctacctaaag
accaaacgtgccctcagccctctcttgcaggaggttccgtctgcttcatgtagccctacc
aaaggctgcagtacaggttccccgtgctcttcggccaaagggatgggcgacggagcagag
ggcaagcccggcaccagccactacggacccccagatggacagtacatctccccgaacaag
cagaacaaagagcagggctactccacgctgcctccctccgaccccgtagccaaagtcctg
gctgaagcacgttcgcggatcagccaggagacggcggtggaaatggacagcgttttggag
cagggcagaggagagatgggccgcagcaccatggacgcaggccaggtggtcagagatatc
gacaaactgctgcaggattgtcggggaaacgaaaacacccccatcagaaagtaa
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