Sinocyclocheilus grahami (golden-line barbel): 107572319
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Entry
107572319 CDS
T04918
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
sgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107572319
09124 Replication and repair
03420 Nucleotide excision repair
107572319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107572319
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107572319
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107572319
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107572319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
107572319
NCBI-ProteinID:
XP_016114226
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFSNESTALKDRDVAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNSVEHSLSNNNKQEVGISAAFLADIRPQTDG
CNGLRYNLTTDIIESIFRTYPTVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRINTGLQ
DIFSECAKEDEKGLKSMVTQGVKNPMVDLLSLEDKTLDEGYGTATVPTTSNSSNKSLREN
SNSAIIKRFNHHSAMVLAAGLRKAEAPSDQASETSSTDGNSRDSDLFQPPLKKVKLQEAI
EYDDLQGDSVRKTISLNLKKSDRYSHGPIPLQSQHYSTSQDIINSISIIQHEMRSYKPRL
TQVMSSSAASSAITALSPGGVLMQGGGQQTINQLVPTDVQSELKHLYTAAGELLRHFWSC
FPVSTPFLEEKVVKMKSNLEKFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQAAYNKFQA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtccgaggaggtgttgttggtggtgaagagggtccgtcagaggaagcag
gacgggactctgtatctgatggctgagcggatcgcctggggtccggaagggaaggaccgc
ttcaccgtcagccacctgtatgccgacatccgctgtcagaagatcagtcctgatggtaag
gcgaagatccagcttcagttggttctgcacacgggagaaagcaccacctttcatttctcc
aatgagagcacagcactgaaggacagagacgtcgccaaagaactcctgcagcagctcctg
cccaagttcaagaagaaagccaataaagagctggaggagaagaacaggatgttgcaggaa
gatcctgttctgttccagctctataaggacttagtagtgagtcaggtgatcagtgctgag
gagttctgggccaatcggctgagcctgaattctgtggagcactccctctccaacaacaac
aaacaggaagtgggcatttctgctgccttcctggccgacatcagaccgcagacggatggc
tgcaacggcctgcgctacaatctgaccacagacatcatcgagtcgatcttcagaacttac
cctacagtcaagcagaaatacgctgagaatgttcctcacaacatgacggagaaggagttc
tggacgcggttctttcagtctcattacttccacagagaccggatcaacacaggcctgcag
gacatcttctcagagtgtgccaaagaggacgagaagggcctgaaatcaatggtgacccag
ggagtgaagaaccccatggtggatctgctttctctcgaggataaaactttagatgagggt
tacggcacagctaccgttcccactacatcaaactcatcaaacaaatcactgagagagaac
agcaactctgccataatcaaacgcttcaaccaccacagtgccatggtgctggcggccggc
ctacgcaaagcggaagctcccagcgatcaagccagtgagaccagcagcactgatgggaac
tccagagattcggatttattccagccgccactcaaaaaggtaaaattacaggaagccata
gagtatgatgacctgcagggtgactctgtgcgtaagaccatctcattgaacctgaagaaa
tcagacagatattcccacggcccgattcctcttcagtcgcagcattactccaccagtcag
gacattatcaactccatcagcattatccagcacgagatgaggagctataaaccccgtctg
acgcaggtgatgtccagcagtgcggcgagctccgccatcacagcgctgtcacctggaggg
gttctgatgcagggcggaggccaacagaccattaaccaattagttcccactgatgttcag
agcgagctgaagcacttatatacggccgccggagagctgctccgacacttctggtcatgt
ttccccgtcagcactcccttcctggaggaaaaggtggtaaagatgaaatctaacctggag
aagttccagatgacgaagctccgcccctttcaagagaagatccaacggcagtatttgagc
actaatctaacgggtcacctggaggaaatgcttcaggctgcgtacaacaagttccaagcc
tggcagacgcgcagaatgatgagaaaaacctga
DBGET
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