Sinocyclocheilus grahami (golden-line barbel): 107573462
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Entry
107573462 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107573462
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107573462
03320 PPAR signaling pathway
107573462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107573462
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107573462
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107573462
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107573462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107573462
NCBI-ProteinID:
XP_016115378
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MCALHQRRLSTDLLMPRTPKCDDPYRRTPFLKYKDSSGQVTSSPLSSPTSHRGMHPSLLS
PTSLGPSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGMGYGPSISPQLNSPMN
SVSSSEDIKPPLGINGVMKVPAQPLGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFF
KRTVRKDLTYTCRDSKDCIIDKRQRNRCQYCRYQKCLAMGMKREVLLHTAVQEERQRAKD
RSENEVESTSSANEDMPVEKILEAELAVEPKTETYIETNVPMPSNSPNDPVTNICQAADK
QLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHR
NSAHSAGVGAIFDRVLTELVSKMRDMEMDKTELGCLRAIVLFNPDSKGLSNPGEVEALRE
KVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM
LEAPHQMT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctcttcatcaacgcaggctttctacagacttgttaatgccaaggacccccaaa
tgtgatgatccctatagacggacccccttcctaaaatataaagactcctcgggacaggtg
acgtcctctcctcttagctcacccacgtcccaccgggggatgcatccatcactgctgagt
ccgacttcattaggcccctcggggtctctgcactcccctatcagcactctgagctcgccc
atgaacggcctgggctctcccttttctgtcatcagctcacccatggggccacattccatg
gcgtcacccgggatgggctacggccccagcatcagcccacagctgaattcacccatgaac
tctgtcagcagctcagaagatatcaagccgcccctgggcatcaacggtgtgatgaaggtg
ccagcccagcccttgggcacccccctttccctcaccaaacacatctgtgccatctgtggc
gaccgctcctcaggtaaacactacggtgtgtacagctgcgaggggtgcaagggtttcttc
aagaggactgtgcgtaaggacctgacctacacttgtcgagacagcaaggactgtattatt
gacaaacgccagcgcaaccgctgccagtactgccgctatcagaagtgtttggccatgggc
atgaagagagaagtattattacatacagccgtccaggaggagcgccaacgagccaaggac
cgcagcgagaacgaggtggagtcgaccagcagtgcgaacgaagacatgcctgtggagaag
atcctggaggcggagcttgctgtggagcccaagacggagacatacattgaaaccaatgta
ccgatgccctcgaattcacccaatgatccagtcacaaacatctgtcaggccgcagacaag
cagctcttcactctagtggaatgggccaagaggatcccgcatttttccgagctcccgctg
gacgaccaggtcattcttctacgagcaggatggaatgagctcctcattgcgtcattttca
caccgttcaatagcagtgaaagatgggatactgttggccacaggattgcacgtgcaccgg
aacagcgcccacagcgccggagtaggagccatatttgacagggtgctgacggagttggtg
tcaaagatgagagacatggagatggataaaacagagctagggtgccttcgagccattgtc
ctcttcaatccagactccaaaggcctgtcaaacccaggtgaggtggaggcgctgagagag
aaggtctatgcctctctggaagcctactgcaaacagaagtaccctgaacaacctggaagg
tttgctaagctgttgctgcggctccctgccctgcgttccattggactgaagtgtttggag
catctgttcttcttcaagctcataggggacacgcccatcgataccttcctcatggagatg
ctagaggcgccccaccaaatgacataa
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