Sinocyclocheilus grahami (golden-line barbel): 107573478
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Entry
107573478 CDS
T04918
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107573478
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107573478
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Pre-60S particles
Helicases
107573478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
CTE_SPB4
CTT_SPB4
Helicase_C_2
TFIIF_alpha
Cas3-like_C_2
SART-1
Motif
Other DBs
NCBI-GeneID:
107573478
NCBI-ProteinID:
XP_016115397
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MQLFFLRLHSLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASS
VQKTPARLSNYYAICRAEEKFNALVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNV
SIHCIHGKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVH
RCGRTARIGNQGNALVFLLPMEESYVNFLSINQKCPLQPYPPVKDVVDVLPKLKAMALGD
RAMFEKGMKAFVSCVQAYAKHECSLIFRIKDLDFAALARGFGLLRLPKMPELRGKTFPDF
KQEAIDTDSIRFKDKNREKQRQKWLAEQKEKETPLKKNFIKNKAWSKQKIKKDKKKKKAA
KRKLDEESDVDDEDLNELLNDTRLLKKLKKGKISEEDFDKHLSSAGSSRPKRAEVDSSEG
DGE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttttttttcttcgcctccacagtttaaacactattctggggtatttacccaag
cagcggcgtacagggcttttctccgccacacagacgcaagagctggagaagttggtgagg
gccggtctgcgcaaccctgtgcgaatcacagtgaaggagaaaggtgtggcggcctcgagc
gtgcagaaaacaccagccagactcagcaattattacgcaatatgtcgggcagaggagaag
ttcaacgctttggtggcgtttctcaggcagcacaaacatgagaagcagcttgtgttcttc
agcacctgtgcctgtgtggagtacttcggtaaagccctggaagtcttgatcaagaatgtc
agcatccactgcatccacgggaagatgaaacataaacgaaacaagatctttgcagatttc
cgggcgctgaagagtgggattctcgtgtgcacagacgtcatggccagaggcatcgacatc
ccagaagtgaactgggtgcttcagtacgacccaccaagcagtgcaagttcctttgtgcat
cggtgtggaagaactgcacgtatcggaaaccagggcaatgcactcgtctttcttctgcca
atggaagagtcgtatgtaaatttcttgtccattaatcaaaagtgtcctcttcagccatat
ccaccagtgaaagatgtggttgatgttctgcctaaactgaaggcgatggctttaggtgac
agagcgatgtttgagaagggcatgaaagcctttgtgtcgtgtgtgcaggcgtacgccaaa
cacgagtgtagtctgatatttcgcattaaagacttggattttgctgctctagcccgtggc
tttggtctcctccgtttgcccaaaatgcctgaactgagaggaaagacattcccggacttc
aaacaggaggccatcgacacagactccatccggtttaaagataaaaacagggaaaaacag
agacaaaaatggctggcggagcagaaagaaaaagagacgccattgaagaagaacttcatt
aagaacaaagcctggtccaagcagaagatcaagaaggataaaaagaaaaagaaagctgcc
aaacgaaaactggatgaggaatcagatgttgatgatgaagacttaaacgagcttttaaat
gacacgcgtctgctgaagaaactcaagaaaggaaagatcagtgaagaagactttgacaag
catttgagttcagcgggcagctcacgtcccaaacgagcagaagtggacagttctgaagga
gacggagaatga
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