Sinocyclocheilus grahami (golden-line barbel): 107573657
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Entry
107573657 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-alpha-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107573657
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107573657
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107573657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZnF_RZ-type
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-rbx1
EpoR_lig-bind
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107573657
NCBI-ProteinID:
XP_016115585
LinkDB
All DBs
Position
Unknown
AA seq
3259 aa
AA seq
DB search
NAGEWHQYDDIVCKEPSKEVMKRIKEFLWSKQRKKIIEGREVAGSFMLQTIFDLLRSWST
INLGNFFCQLQQFYEVYGNPFVFEKTIVKWGSLEYGEKDVKKLLKGFMLEWVIPELQKDH
KGKNAFNMEPLNAALILLYVWGRYSLELDNRTLSHLCTALCLPKLPKEEFLSFWAGITES
FSIINTFRLSDMVEALINRVRGEHTSNWIIVIPLLHLLKGTSEPFQPVLNQVNAQYEKCW
VGLQGLKLEYVKNRRAMLDLMKAHAHLVELDRLLARSWMYLMTLDELVECDSFIHAELLD
ILQLFTMKCPKEISNSTSTSVLKILEHIQLHLLEQRYSCLNEDYGIQCIQAACKLLEMIC
KRVSHALTDIPVACMNLVAAVSGFAQTTQQTDTFSEKTCELLRYAKQTVRRWIGQTFRGR
LINTSYQTAASFTREIEMWNNIVSIQFVSKDFTKEWRETFTRDFEGKYQKEDPLDQIQVY
CSKVEELHVSKPFLVGSVEKCALQAVAAQCQEDPLDQIQVYCSKVEELHVSKPFLVGSVE
KCALQAVAAQCQRHVDFKKERLDSIDDELVQAKIVLVEITESRRLCLQELSRRKNFVTWV
KEVLQDINELKVFVDLASISAGENDMEVDRVACFHDAVLGYSSMLYDLKPDADFKLFKET
LKNLWKALDNDRNLPKKLSDSARHLEWLKTVKDSHGSVETSSLSLASAINMNGIYIISAQ
NQKLCLEDILKLHIMEEHDEGCETRIYSFEDLRELQNKLMLMSGKGDQGQREVNRFAEVF
ASVQRLACAFIDLFVAGNPLFRHWKAKINCNSKEECIIMDLDLGSVVSVMIEGDVTEQLP
EVCRKMESCLCFWKAFMDKQRSQHYYLNYFTSEQVVYLCSQLTQKNDTELKDQVLMMLSF
IKPNWSFSDVTQAWHRLQYEVIKKDLRQNDDLEFQTFAEVPSMIKHDLNTDEPCALFDNL
ASQLRHANGSEKLDVIWNAYMRDMNNFLPDCLDVRSLGYLLEMLANSPSQYESDSKQDEK
TSNIQRELPNGMATGKPNLIICPSEEILITCISMYMRSRKEPLPTYDEVLLCSASTPYEE
VELFLRRCLSDGYRGKKIYTMLYVDQLTYEVSYKVEQFFHQQNAQSRNDYRLVLVCSSNK
EHAYLPSAFSQFRLHLVPQEPMINIQQYLVRHFTVPADISSAAAVFKDRQFVGVVFSERS
GVGKSLYVKRMHEKLKTITDNPTQLKCIRLTEPRVDENIILKSLLNNFKKRELSVYHFDI
TTMVKTGLHEFLFRLLILGYLIDSEGNMWKRNNEHLYVIEILRPDCSTSQRDRKTGAFMD
VFQSVYCRPPKEVLELEMRIQEDPSLVEGDDPLMDDQEFQSEAYQRPYQYLQRFYNGINL
DTFRYQGVEGTHVECLQMLFVYCGIVDPSWAELRNFAWFLNLQLRDYQRDTEITNPILWS
LIMAVGVCYHACLEDKQKYRENICRHLPETYSPMKVMQEISLIQDLFLSGVPLGETIARN
NALKENVFMMVICIELRIPLFLVGKPGSSKSLSKTLVADGMQGQAAHSDLFKKLKQIHLV
SFQCSPHSTPDGIINTFKQSARFQKDKNLSEYVSVVVLDEIGLAEDSQKMPLKTLHPLLE
EGCIDDQPVPHKKVGFIGISNWALDPAKMNRGIFVSRSDPDQTELINTAEGICSSNPMIL
ERVREYFQPFACAYLNICNEQGRGFFGLRDYYSLIKMIFAVAQTSEQRKKPSAEQIVTAV
LRNFSGKDNVDAVAVFTSKLNIKPKLENVSTIELVRENITAIGQDEECRYLLVLTKNYAA
LQILQHMFFSDLSEKTILVQNYIAVDSNVGCTMPFSWRIKDHLEELWVHAFQQEGHSLDQ
FEEFFWKIPLGGYISEATQEMQMEFFHRYLQDFISMTMKVTSVVNLELLCGALTCGVNEL
KGSQEIHESEVISLPWVHAAYHRFKNRIQNVYRMISIEPQIAQRLLDNTCAREGTELVLD
VYTALACIECLEPQALDEDGQSLAWLRRVKKLQVPIELVCCEESLRHYGEKSNRIVTHIQ
HGWHRIYSLALFVQHMLLGVEDVHSNLRPLVLDHTRRLAQVLEQDSDLKNKQPFEAAVII
LKACKDEASQSIFRFGSQLCPVCMEDPQDPLSLPCDHIFCLTCIKQWLVPGQMLCPLCRL
EVPDDFELKASETIQGLIHQNALFRKRCNAFFIDLVSTMCFKDSTPPSMDIIQHLLSLLM
VEARSLPQIRGQDRKFLTKPFSPFDDSVDKNPVVRSVVLKLLLKYSFDDVKHYLQQHLTE
VEQSNIIQETDKTELYSLYINSLEVCAQDDPPSITSVFLNSVNDLCCQSSNDWYRVYLIR
KICSLHGVEYVQKLLSQKEFRWLFPQEILNMNQDDNKIDHYVACGLDYKTIRDAVAKAMR
DCDMNEIQKAIEHCKSTPMKKAVYLLMALFREVTFLYRNGNPNSDPKSENQDDNKIDHYV
ACGLDYKTIRDAVAKAMRDCDMNEIQKAIEQDFIRSTDIFVNDETKAFAKGLVNNHLHAL
RVQPQMSGRELLLVEVTVHMAAVLLCGNLPLLEPLQQLALSPNNMTASFIPTMPDDMLAV
AQQAIKGPHGMKDIFVNDETKAFAKGLVNNHLHALRVQPQMSGRELLLVEVTVHMAAVLL
CGNLPLLEPLQQLALSPNNMTASFIPTMPDDMLAVAQQAIKGPHGMKACPNGHPCIVDMC
GLPMEVARCLECNAEIGGIDHKPVDGFQTMQIQADRTQSGHILGDAHRRDQPDMQDTKNM
SPAPFALLRLLTHTCMRLGAQNNTQSVMQIIKPAVPDPGPFLMAHLLKDMEQLIRALGKG
VDDTISTIHLTIHSLLDPHQASQWPAPYDETLSSKDARNGWENAMNTDVITHQLKVLEKQ
LKEVNEIIRKDERVSSNPVMKLAFGKPELFLRSLPQNSLIHNSSIWSCRRKISALSLAHI
VEQNNGQDTLCILRRFLQREAELRLVKFLPDILVLQKDLVKKFQNVTDLTSKTIGEFLDS
HKEASLAWYKKCINIFLSTWNQLRVSLATTGEIKLPAEYTQKDLSLDADLQVLLPQRRGL
GLCSTALVSYLIALHNDLVYTMEKHTGEESGYTVSPADLTEMHVIHYEYERDLLPLILSN
CQYSMECGQETLMEYDLPNIQQQIFTRFLQGKPLITLNGIPTVVNRQDRIYEIILMDVKG
KVPQEPLQALTQHNLVKELQSYSDVCEALSTVELALGFLAMTGGEPRVQLGTYLEEVLQM
TDNMAPHVFKVGHEHTLSS
NT seq
9780 nt
NT seq
+upstream
nt +downstream
nt
aatgcaggagaatggcaccagtatgatgatatcgtctgtaaagaaccatctaaagaagtg
atgaaacgtataaaagaatttctgtggtctaagcagaggaaaaaaataatcgagggaaga
gaagtcgctggttcattcatgctgcaaactatctttgacctcctgagaagctggagcaca
attaacctcggcaacttcttttgtcagctgcaacagttttatgaagtctatggcaaccct
tttgtatttgaaaagacaattgtgaaatggggctcacttgaatatggtgaaaaagatgtg
aaaaagcttctgaaggggttcatgctggagtgggtgattccagagctacagaaagaccac
aaagggaagaatgcattcaacatggagccactgaatgctgctctcattttgctctatgtg
tggggacggtatagtctagaattagacaacaggactctttctcatctctgcactgccctc
tgcctgccaaaattacctaaggaagagttcctgtctttctgggctggcataacagaatca
ttttcaataataaacacctttagattgtctgacatggtggaggcgctgatcaacagggtg
agaggagagcacacgtccaattggatcatcgtcattccactgctacaccttctcaaaggc
acttcagaaccatttcagccagtgcttaatcaagtcaatgcacaatatgagaagtgctgg
gttggcctgcagggactcaaattggagtatgtaaaaaatcgaagggcaatgttggatctc
atgaaggcacatgcacacttggtggagctggacagactgctggcacggtcttggatgtac
ttgatgactttagatgagttggtcgagtgtgactccttcatccatgcagagctcctggac
atcctgcagcttttcaccatgaaatgccccaaagaaatctcaaacagcacttcaacaagc
gttttgaagattctggaacacattcagcttcacttgcttgaacaaagatacagctgtctg
aatgaggattatggcattcagtgcattcaagcagcttgcaaacttctagagatgatctgc
aaaagagtcagtcatgcgcttactgatattcctgttgcttgcatgaaccttgtggctgct
gtgtcaggatttgcccagacaacacaacaaacggacactttctctgagaagacttgtgag
ttactccgttatgccaagcaaactgtcagaagatggattggacaaaccttccgaggcaga
cttataaacacaagttatcaaacggctgccagcttcactagagagattgagatgtggaat
aacattgtatccattcaattcgtgagtaaggactttactaaagaatggagagagactttt
acacgggactttgagggaaagtatcaaaaggaagatcctctggaccaaatccaggtttat
tgctcaaaggttgaggaacttcatgtctccaagccttttttggtgggtagcgtggagaag
tgtgctctccaggctgttgctgcacaatgtcaggaagatcctctggaccaaatccaggtt
tattgctcaaaggttgaggaacttcatgtctccaagccttttttggtgggtagcgtggag
aagtgtgctctccaggctgttgctgcacaatgtcagagacacgtggattttaaaaaggag
cgtcttgacagcattgatgatgagttggtgcaggcaaaaattgtgcttgtggaaatcaca
gaatcccgcagactgtgccttcaggagctcagccgcagaaagaattttgtcacgtgggta
aaagaggtgcttcaagacatcaatgagttgaaagtatttgtggatttggcttccatctct
gccggagagaatgatatggaagtggatcgtgtggcctgttttcatgatgcagtccttggc
tactcctcaatgctctatgatttgaagccagatgctgacttcaagctttttaaagagacg
ctgaagaatctatggaaggcgcttgacaatgaccgcaacctcccaaagaaactgagtgac
tctgcaagacacttagaatggttgaagacagtcaaggatagtcatgggtcagtggagacc
tcatctctgtctctggcatcagctatcaacatgaacggcatctacattattagtgcacaa
aatcaaaagttgtgcttggaagatattctgaagttacatattatggaagagcacgatgag
ggctgtgagacacgcatttattcttttgaagacctcagggaacttcagaataaattaatg
ctaatgtcgggcaaaggggatcagggccagcgtgaagtcaatcgatttgcagaggtcttt
gctagtgtacagaggttggcctgtgcatttattgatttgtttgttgctggaaatccattg
ttcagacactggaaggcaaagatcaactgtaatagtaaagaagaatgcatcattatggac
ctcgatttaggaagtgttgttagtgtcatgattgaaggtgatgtcacagaacagttgccg
gaagtctgccggaaaatggagagctgtttatgcttctggaaggcttttatggataagcag
agatctcagcattattacttaaactattttacgtcagaacaggtggtctacctgtgcagc
cagctcacccagaaaaacgacactgaattgaaagatcaagttcttatgatgctctccttt
atcaaacctaattggtccttttcagatgtgacacaagcttggcacaggcttcagtatgaa
gtaattaagaaggaccttaggcaaaatgatgacttagaatttcaaacgttcgcagaagtt
cccagcatgattaaacatgatttgaatactgatgagccatgtgcattgtttgacaacttg
gcaagtcagctgaggcatgctaatgggtcagaaaagctagatgtgatttggaatgcttac
atgcgagacatgaacaacttcctgccagactgccttgacgtcagaagccttggatatctt
cttgaaatgttagccaacagccccagtcaatatgagagtgattccaaacaggatgagaaa
acaagtaatattcagagagaactgccaaatggaatggctactggaaaaccaaatctgata
atctgcccttctgaagaaattctaataacatgtatttcaatgtacatgagaagcagaaaa
gagcctctaccaacctatgatgaagtacttctctgtagcgcttccactccatatgaagaa
gtggagcttttcctcaggcgttgtctctctgatggctataggggaaagaaaatatacaca
atgctctatgtggaccaacttacctatgaagtgagctacaaagtggagcagttttttcac
cagcaaaatgcacaaagcagaaatgattacagactggtgttggtctgcagctctaataag
gaacatgcataccttccctctgcttttagtcagtttagattgcacttggttccccaagaa
cctatgatcaatattcagcaataccttgttaggcattttacagtcccagctgacatatcc
agtgctgctgctgtgttcaaagacagacagtttgtgggagttgtattctctgaaaggtca
ggagtcgggaaatcactttacgttaaacgaatgcatgagaaattaaaaacgatcaccgat
aatcctacacagctgaagtgcatcaggttaactgagccgagagttgatgaaaatatcatc
cttaagtccttgctcaacaacttcaagaaacgggaactttcagtttatcattttgacatc
accaccatggtgaagacaggacttcatgaatttctgtttaggctattgattcttggttac
ctcatagactcggaaggaaatatgtggaaaaggaataatgagcacctgtatgtaattgag
atactaagaccagattgcagcacatcacaacgtgacagaaaaactggtgctttcatggat
gtgtttcaaagtgtttactgccgtccacctaaagaggtccttgagctagaaatgagaatc
caggaagatccgtcattagtagagggtgatgatcccctcatggatgaccaagagttccaa
agtgaggcctaccagcggccttatcagtacctgcaacgtttctacaatggtattaatttg
gataccttcaggtaccaaggagttgagggcactcatgttgaatgccttcagatgttgttt
gtgtactgcggcatcgtagacccgtcttgggcagagttgcggaattttgcttggttccta
aacttacaacttagggattatcagagggatactgaaataacaaacccaattctatggtca
ttaattatggctgttggtgtctgttaccatgcctgcttggaggataaacagaaatacaga
gaaaacatttgcagacaccttccagagacctacagcccaatgaaagtgatgcaggagatc
tcacttattcaggatcttttcctgagtggagttccattgggtgaaactattgcccgaaac
aatgccttgaaggaaaatgtcttcatgatggttatttgcattgaactgagaatacctctc
tttttggttggaaaacctggaagctctaaatctttgtcaaaaactctagttgcagatggc
atgcaaggccaagcagctcattcggatttgtttaaaaagctaaagcaaattcatcttgtt
tccttccagtgcagtcctcactctacaccagatgggatcatcaatacattcaagcagtct
gcccgttttcagaaagacaagaatctatcagagtatgtctcggtggtagtgctagatgag
ataggcttggctgaagattcccagaaaatgcccctgaaaactttacatcctttgttggaa
gagggatgcatagatgaccagccagtaccgcacaagaaggttggattcatcggtatctct
aactgggctttggatccagccaagatgaatagagggatatttgtttcacgtagtgatcct
gatcaaacggaattgattaatactgctgaaggaatatgttcctcgaatcccatgatcctt
gagagggtaagagagtactttcagccattcgcctgcgcttacctgaacatctgtaacgaa
caaggcagaggtttctttggtttgcgagactattacagcttgataaagatgatatttgct
gttgcccaaacttcagaacagaggaagaagcctagtgcagaacagattgtgacagctgtg
ctgaggaacttcagtggcaaggataatgtggatgctgttgcagttttcaccagcaaacta
aatatcaaacccaaacttgagaatgtcagtaccattgagcttgtaagagagaacatcaca
gccattggtcaagatgaggaatgcagatacctgctggttctgaccaaaaactatgcagcc
cttcaaattcttcagcatatgtttttttcagacctctcagagaagaccatcttggttcaa
aactacattgcagttgacagcaatgtgggttgcaccatgcctttcagctggagaattaaa
gatcatctagaggaactctgggtacatgcttttcagcaagaaggacactctctagatcaa
tttgaagagtttttttggaagatccccttgggcgggtacatctctgaagcaacccaagag
atgcagatggaatttttccacaggtatctccaggatttcatctccatgaccatgaaagta
acatcagtggtgaatctcgagctcttatgtggagcccttacttgtggtgtaaatgagctt
aagggtagtcaggaaatccatgagagtgaagttatttctctgccgtgggttcatgctgcc
taccatcgcttcaagaaccgaatacagaacgtctacaggatgatcagtatagagcctcag
attgctcagaggcttctagataacacatgtgccagagaaggaacagaactggtgttagat
gtgtacactgcattggcctgtattgaatgcctggagccccaggctctagatgaagatggt
caaagtctggcctggcttagacgtgttaaaaagctacaggtgccaattgagctggtctgc
tgtgaggagagccttcgccactatggagagaaaagcaaccggattgtcactcacatccaa
catggctggcatcgcatatactctctggccttgtttgtgcagcacatgctactgggtgtc
gaggatgtgcattcgaacctcaggccactggttcttgaccacacacgacgcctagcacaa
gtcctggagcaagactcggacctcaaaaacaagcagccgtttgaggcagcggtcatcata
ctcaaagcttgcaaagatgaagcatctcagagcatttttaggtttggcagtcagctttgt
ccagtgtgcatggaagatccgcaggaccctttgagtctgccctgtgaccacatcttctgc
ctgacctgtatcaaacagtggctggtgcccggtcagatgctctgtcctctgtgtcgcctt
gaagtgcctgatgactttgagctcaaggcctctgagacaatacagggtctgatccatcaa
aatgcattgttcagaaagcgatgcaatgccttcttcattgatctggtgtccaccatgtgc
ttcaaggacagcactcctcccagcatggacatcatccaacatctgctgtccctcctgatg
gtagaggcccgctcgctccctcagattagagggcaagaccgcaagttcttgactaagcct
ttttctcccttcgatgactctgtggataaaaatccagtggtgcgttcagtggtgctgaaa
ctcctgctcaagtacagctttgatgatgtgaagcactatcttcagcagcatctgacagaa
gttgagcaaagcaacatcattcaggagactgataaaaccgagctttattccttgtacata
aatagtttggaggtgtgtgcacaggatgatcctccatccattacctcagtgtttttgaac
agtgtgaatgatctatgctgccagagcagtaatgactggtacagggtttacctcatcaga
aagatctgcagccttcatggggttgaatatgtccagaaacttctgtcacagaaagagttc
aggtggctgtttcctcaggagattcttaatatgaatcaagatgacaacaaaattgaccac
tatgtggcatgtggactggactacaaaactattagagatgcagtagccaaagccatgagg
gattgcgacatgaatgaaatacagaaagcgattgagcattgcaaaagcacacccatgaag
aaagctgtttatctgctaatggctttgttcagagaagtcaccttcctgtacagaaatgga
aaccccaactcggaccctaaatctgagaatcaagatgacaacaaaattgaccactatgtg
gcatgtggactggactacaaaactattagagatgcagtagccaaagccatgagggattgc
gacatgaatgaaatacagaaagcgattgagcaagattttatcagaagcacagacatcttt
gtcaatgatgaaacaaaggcgtttgctaaaggactggtgaataatcatctgcatgctctg
cgtgtgcaacctcagatgtcaggcagagagcttcttctggtggaggttacagttcacatg
gctgcagttctcttgtgtggaaatctgcctttactggagcccctgcagcagctggcactg
tccccaaacaacatgacggcttcattcattccaactatgccggacgacatgttggctgtt
gcccagcaggccataaaaggcccgcatggcatgaaagacatctttgtcaatgatgaaaca
aaggcgtttgctaaaggactggtgaataatcatctgcatgctctgcgtgtgcaacctcag
atgtcaggcagagagcttcttctggtggaggttacagttcacatggctgcagttctcttg
tgtggaaatctgcctttactggagccactgcagcagctggcactgtccccaaacaacatg
acggcttcattcattccaactatgccggacgacatgttggctgttgcccagcaggccata
aaaggcccgcatggcatgaaagcctgtcctaatggtcatccatgcattgttgatatgtgt
ggtctgcccatggaggttgcccgctgtctagagtgtaatgcagaaataggcggcatagac
cacaaacctgttgacggcttccaaaccatgcagatacaagcggaccgtactcagtctgga
cacattctgggtgatgcacaccgtcgtgaccagcctgacatgcaggacactaagaatatg
tcacctgctcccttcgcgcttctcagactgctcacacacacgtgcatgcggctgggagct
caaaacaacacacagagtgtcatgcagatcatcaagcctgctgtgccggatcccgggcca
ttcctgatggcccatcttttgaaggacatggagcagctgatcagagctctgggtaaagga
gtggatgatacgatcagtaccatccatttgaccatccacagtctacttgatccccatcag
gccagccaatggcctgctccttatgatgaaaccctttcctctaaagatgcaagaaatgga
tgggaaaatgccatgaatactgatgtcattacacatcagctgaaggttctggagaaacag
ctaaaggaagtgaatgaaatcatcaggaaagatgagcgagtgtcttctaatccagtgatg
aagttggcatttgggaaaccagagcttttcctgcgctctttgccccagaactcccttatc
cataattcatccatctggagctgcaggaggaagatctcggcgttgagtctggcccacatt
gtggaacagaacaatggtcaggacactttatgtatactcaggaggttccttcaaagggaa
gcagagttacggctagtgaagttccttcctgacatcttggttctccagaaggatttggta
aagaagttccagaacgtgacagacctaacctccaaaaccataggagagtttctggatagc
cataaagaagcttcactagcttggtataaaaagtgcataaacatcttcttgtcaacatgg
aaccaactcagggtatctctggccaccacaggagagataaagctgccggctgagtacact
cagaaggatctgagtctggacgctgacctgcaggtgctgctaccacagagacgtggtctg
ggcctgtgctccactgcccttgtcagctacctcattgcccttcataatgaccttgtgtac
accatggaaaaacacaccggagaggagtctggttacacggtaagcccagctgacctgacg
gagatgcatgtgatccattatgagtatgagcgggatctgcttccactgatactgtccaac
tgccagtacagcatggagtgcggacaggaaacactgatggagtacgacctgcccaatatt
cagcaacagatcttcacccgctttctacagggcaaacctctcataacccttaatggtatt
ccgacagtggtgaacagacaggacagaatttatgagatcatattaatggatgtgaagggc
aaagtgccacaagagccgctgcaggctcttacacagcacaacctcgtgaaggagctgcag
tcctacagtgatgtgtgtgaggcactgtctacagtcgagctggccctgggtttcctcgcc
atgaccgggggagagccacgggtgcagctgggcacttatttagaggaggtgctacagatg
actgacaacatggccccacatgtcttcaaggttggtcatgaacacacactttcttcatga
DBGET
integrated database retrieval system
