Sinocyclocheilus grahami (golden-line barbel): 107574038
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Entry
107574038 CDS
T04918
Symbol
sox8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107574038 (sox8)
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107574038 (sox8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107574038
NCBI-ProteinID:
XP_016115997
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MTEEQERSSAEPPPPCSPAGSSSSLSAEESDSDAPSSPAGPASRAALSLPGKDEDERFPA
CIRDAVSQVLKGYDWSLVPMPVRVNGSSRSKPHVKRPMNAFMVWAQAARRKLADQYPHLH
NAELSKTLGKLWRLLTENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGPGESEL
THHVYKAEPGMGRLAGPVTDHTDQPHGPPTPPTTPKTDLHHGGKPDPKHEGRRLLDGTRQ
NIDFSNVDISELSTDVISNMESFDVHEFDQYLPLSGQPLTSDGSYASSYSHPASSGASWS
RKGPVASSSPGTSDVSQHRAHIKTEQLSPSHYSEHSPEYGVYSASVTRPPCDYTERQSSG
YYSQYPSYASGLYQYPYFHSSRSTLLSSRSHSPSASWDQPVYTTFSRPL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagcaggagaggtccagcgcagagccgcctccgccgtgcagtcccgccggc
tcgagcagctcgctgtctgcggaggagtcggactccgacgcgccttcgtctcccgctgga
cccgccagccgcgcggcgctcagcctcccggggaaggacgaggatgagcggttcccggcg
tgcatcagggacgcggtgtctcaggtgctgaaggggtacgactggtctttagtgcccatg
cctgtgcgagtgaacggctccagcaggagcaagccgcacgtcaagagacccatgaacgcg
tttatggtgtgggctcaagccgcgcgcaggaagctggcggatcagtacccacacctgcac
aacgccgagctcagcaagaccctcggaaaactctggaggctgttgacggagaacgagaag
agaccgtttgtggaggaagccgagagactgagagttcagcacaagaaagatcacccggat
tacaaataccagccgaggcgccggaagagtgtgaagcccggtccgggcgagtctgagctg
acccatcacgtgtataaagctgaacctgggatggggcgactggcgggtccagtcactgat
cacacagatcagcctcatggacccccgacaccccctacaacgcccaaaacggacctccat
cacggaggaaagccggaccccaagcatgaaggaagacgcttgcttgacggcactcgacag
aacatcgacttcagtaacgtcgacatttccgagctcagcacagacgtcattagcaacatg
gaaagcttcgacgtgcacgagttcgaccagtacttgcctctgagtggccagcctctgacc
tccgacggctcgtacgcttcgtcctacagccaccctgcaagcagcggggcctcctggagc
cgcaaggggcccgtggcgtcctcatcgcctggcaccagcgacgtgagccagcacagagct
cacattaaaactgagcagttgagcccgagtcactacagcgagcactcgcccgagtacggc
gtttacagcgcctcggtcacccgccctccgtgtgactatacagagcgtcagagctcgggc
tactacagccagtaccccagctacgcctccggcctctaccagtacccctacttccattcc
tcacggagcaccctcctcagcagccggtcccacagtccctccgccagctgggatcagccg
gtctacaccacgttctccaggccgctttga
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