Sinocyclocheilus grahami (golden-line barbel): 107574147
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Entry
107574147 CDS
T04918
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107574147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107574147
03036 Chromosome and associated proteins [BR:
sgh03036
]
107574147
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107574147
Coactivators
SAGA/TFTC/STAGA complex
107574147
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107574147
STAGA complex
107574147
TFTC complex
107574147
SAGA complex
107574147
SLIK complex
107574147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
WD_LRWD1
VPS8_N
Beta-prop_WDR11_2nd
PROPPIN
LisH_TPL
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
107574147
NCBI-ProteinID:
XP_016116099
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MTPLLSAPGEKMAAVQDAPMELDSEKETKPEILSDGTSNLSGNTASGTLSSPPLTAGGAP
KQEDQQTLIAVLQFLRRNKLTESVDILRREACLEDQEDSQTLDGSGGGKGDGDGGDANSL
LSRVSIASAAAPQSTLTPIPVKNDQPDVSVVLSAYSQQGDPSLYQVYYTGLKNFIESVLD
CHRAELSQLFYPLFVHMYLELVYNNHETKAKAFFEKFSGDQECYYQDDLQILCGLTKKEH
LKGNEALLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKS
QIDSMSGSFAGETRREVNKAKVFYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSM
GSKSKKQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLGPENLPSICFYSFLNAY
QGLTAVDFTDDSSLLAGGFADSTVRVWSATPKKLRKVKSAAELNLIDKESDDVLERIMDE
KTASESKNLYGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD
THFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVVTGSTDRT
IRLWDVLNGNCVRFFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGH
TDTIYALKFSRDGEILASGSMDNTVRLWDSMKAFDDMETDDFTAATGHIPLPDNSQELLL
GMYHSKSTPVTHLHFTRRNLLLAAGAYNSQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacgccattgctttcagcgccaggggaaaaaatggcggctgtgcaagatgcaccgatg
gagctggactcagagaaagagacaaagccagaaatcctcagcgatgggacgtcaaacctc
tcggggaacacagcgagcgggacgctgtcatcaccgcccctcaccgccggcggagccccg
aagcaggaggaccagcaaactttgatcgcagttctgcagtttctaaggcggaataaactg
acggagtcggtggacatcctgcggcgggaagcctgtttagaagaccaggaggactcccag
actctcgatggcagcggaggagggaagggtgacggggatggaggggatgcaaactctctg
ctcagccgggtgtccatcgcatcagcagccgccccccaaagcacactgactcccatccca
gtcaagaatgaccagccggatgtcagtgtggtgctgtcagcgtacagccagcagggggat
ccctctctgtatcaggtgtactacaccggcctgaagaacttcatcgagtccgtgctggac
tgtcaccgagcagagctgtcccagctcttctaccctctgttcgttcacatgtacctggag
ctggtctacaacaaccatgagactaaagcaaaggctttctttgagaagttcagcggcgat
caggagtgttactatcaggatgacctgcaaattctctgcggcctcactaagaaagagcac
ctgaaggggaacgaggcgctgctggacttccgtaccagccgtttcgtgctgcgcatttct
cgagactcgtaccagctgctcaagagacacttgcaggaaaggcataataaccagatatgg
aacatcattcaggagcacttgtacatcgacatctttgacggtatgccacgcagcaagagc
cagatcgacagcatgtccggcagttttgcgggagagaccagacgagaagtcaataaagcc
aaggtattctacgggctgctaaaggagccagagattgaggtcccgttagatgatgaagac
gatgaagcagaaaatgaggaagggaagcccaagaagaagaaaacaaaaaaggacagtatg
ggctccaagagtaagaaacaagaccccaatgctcctcaacagaacaggatccctctgccg
gagctgaaggactcagacaaactggacaagatcatgtacatgaaggagagcaccaaaaga
atccggctcggcccggagaacctgccttccatttgcttttattcattcctcaatgcctac
cagggtttgacggcagtagacttcactgatgactccagtctgttagcgggagggtttgcc
gactccacagtccgcgtatggagcgccacacctaaaaaactacgcaaggtcaaatctgca
gcagaactgaatctgattgataaagagtctgatgacgttctggagaggatcatggatgag
aagacggccagtgagtcgaagaacctctacggtcacagcgggccggtgtacggtgtcagc
ttcagtccagacaggaactatctgttgtccagttctgaggacggtacagtcagactgtgg
agcctgcaaacgtttacgtgtctcgtcgggtataaaggacataactatccagtgtgggac
actcacttctcaccctttggttattactttgtgtctggaggacatgacagagtagcacgc
ctctgggcgacagatcattaccagcccttgcggatatttgctgggcatctagctgacgtc
acctgcacgcgattccaccccaactctaactatgtggttacaggctcgaccgaccgcact
atacgcctctgggatgtcctgaatggaaactgtgtccgctttttcacaggtcacaagggc
cccatccattctctggcattctcacccaatggaaagttcctggcatctggatccacagac
gggagagttttactatgggatattggacatggactgatgatcggagagctgaagggtcac
acagacacaatttatgccctcaagttcagcagagatggagaaatcctcgcatcaggctct
atggataacaccgttcggctatgggactccatgaaggctttcgatgacatggagaccgac
gacttcaccgcagcgacgggccacattcccctgccggataactcccaggagctgctgctt
gggatgtatcacagcaaatccacacctgtcacccaccttcatttcaccagacgcaacctg
ctactggccgcaggcgcgtacaactcccagtga
DBGET
integrated database retrieval system
