Sinocyclocheilus grahami (golden-line barbel): 107574849
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Entry
107574849 CDS
T04918
Symbol
nup54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107574849 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107574849 (nup54)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107574849 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
LPP
Motif
Other DBs
NCBI-GeneID:
107574849
NCBI-ProteinID:
XP_016116768
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MAFNFSGASLPGTGFGGATTTSAPTGFGFGSGGSGFGSLAPSGGPTAPVSFGGFGLGPVA
PVLSFGSSLSGAGAFGGFGSTTTSTGGTSFSFSTPSNTGASLFGNTPSKGFGFSSGLGSS
GGLGGAALGFGGFGGIQTAQNQPGGLFNQQASQSSQLFNTASALSAPSVLSDERDSILAR
WNQLQAFWGVGKGYYSSSTPPVEFSQENPFCRFKYVENNFLLRNXXFLFFNKKEADVRSQ
QQQLVELMHKVLGGNPTLSVNVEGVRALPDDQAEMIIYLVERSPSGTSKRVPASTLYSYM
EQMNVKSALQQLGVIMAVSRTALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPV
PMVGFKELLRRLKIQDQMTKQHQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHR
VLQVLIKQEVQRKSGYAIQLDEEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFG
AVRSEERYRVDADLLREIKQHLKHQQKGLSHLISIIKDDLDDIKTIEDGLHDSVHGRSSK
LS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcagcggcgcgagtcttcctggcacaggcttcggaggcgcgaccacg
acatctgcacccacaggcttcggcttcggatcgggcggctcgggatttggctctctggcc
cccagcggtggccccactgcgcctgttagttttgggggcttcggtttgggccccgtagcc
cctgtgctcagttttggcagtagcctcagtggagcaggtgcgttcggggggtttggctcc
accactacctccaccggcggcaccagcttcagtttctccacgccgtcaaacacaggtgcg
agtctcttcggaaacactccgagtaagggctttggtttctcgtctggtctgggctcgagt
ggaggtctgggtggtgctgcactgggcttcggaggattcggtgggatccagaccgctcag
aaccagccgggaggcctgtttaaccagcaggcgtctcagtccagtcagctctttaacaca
gccagcgctctctctgctccgtcggtcctcagcgacgagcgcgactccattctggcccga
tggaaccagctgcaggccttctggggagtagggaagggttactacagcagcagcacaccg
ccggtggagttcagccaggagaaccccttctgccgcttcaagtatgtggaaaataatttt
ctattaagaaattaataatttctattcttcaataagaaggaagctgacgttcgctctcag
cagcagcagctggtcgaattgatgcacaaggttctgggaggaaatccgactctttcggtc
aacgtggagggagtgcgagcgctgcccgacgatcaagcggagatgatcatttatctggtg
gagcgctctcctagcggcacgtcaaagcgagtcccggcgtccacgctctacagctacatg
gagcagatgaacgtgaagtctgcgctgcagcagctgggtgtgatcatggcggtcagtcgc
accgcactgaccccggcgcagctcaagcagctgctgcagaacccgcccgcaggtgtggat
cccatcatctgggaacaggccaaagtggacaatccagacccagagaagttgattccggtg
cccatggtgggcttcaaagagctgctgcgcagactgaagatccaggatcagatgaccaaa
cagcaccagaccagagtggatatcatctctaacgacatcagcgaactgcagaggaatcag
gccacgaccgccgccaagatcacgcagtacaaacgcaagctgatggacctctcacacaga
gtgctgcaggtgttgatcaaacaggaagttcagaggaagagcggttacgccattcagctg
gacgaggaacacctgagagttcagctggaaaccatccaatcagagctcaacgcaccgaca
cagttcaaggggcgactgaatgaactcatgtctcagattcggatgcaaaatcattttgga
gctgttcgttcagaagagcgttaccgtgttgatgccgacctgctgagagaaatcaaacag
catctgaagcaccagcagaagggtttgagtcacctgatcagcatcattaaagacgatctg
gacgacatcaagacgatagaagacgggcttcacgacagcgttcacggacgcagcagcaaa
ctcagctga
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