Sinocyclocheilus grahami (golden-line barbel): 107575490
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Entry
107575490 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107575490
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107575490
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107575490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
107575490
NCBI-ProteinID:
XP_016117344
LinkDB
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Position
Unknown
AA seq
659 aa
AA seq
DB search
MGCRLSGPWMGDGMGVHGQDLTHLQKREAFRILASYEQPITLQIEGRGRSLQYNRTTDCS
TQTERPWDPLRPHSCTLPRLPPSDRAYYNHMTLPGTHRDGSRYEYLPNTPRDLEHRERQA
YKDHEFSSGVSPAQNCLIGCCNTNLEEPRSFQSQTDDDDYMMEKPLGYLPLHHELDSGLG
WTDGSFHQGELSGVETEEGLEERHGRSPSSESFISSELSDSGFYSVSTGEFLRFQRLLEK
RMRHYNARMHHQGEPCSRERRDSQIKHPLEAIPETLTVQPQNVCTPVPGSRGLSRVSSVQ
YRKVERPCLNRHSSSSGSLFNPALYSTCSTPSGQRRLPPHPSSAGMLRRSRTLHHRPVPM
EYRRRASHPASPNYCSGTLHPCGHRVDLPMNLPEEPALMHTVSHPAHPVVLPTQTLHATH
AMSQPSLISPVDEHCYMPPELHDNSRIRASTEPQLQKRFVTQQTPNNRFHTLSHTPSQDA
NDTWPKPASRAGSGGGGGLYSTLEGHTPTSSIRKPSSGNLRALRNQMLRDRASRLADERS
GMSTDEESHSEVRMGRYWNRTERREHMLQKQRQLQARSGGGGGVAASGLVYSGRVVGGTN
GDSCNTLLELSQRKLSRLRNRKLLDDWTTVEELLTHGTRLGPSGDTRQLPTSLLTVTTV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtcgactgtcagggccgtggatgggcgacgggatgggggttcacggtcaggac
ctgacccacctgcagaagcgagaggccttccgtatcctggccagctacgagcagccaatc
acgcttcagattgagggccgggggcggagcctgcagtacaacaggacgacggactgcagc
acgcagacggagcgaccgtgggaccctctccggccacactcgtgcaccctaccgcgactg
cctccctcggacagggcgtactacaatcacatgaccctgcccgggacccatagagacgga
agcaggtacgagtacctaccaaacacgcccagagacctggagcacagagaacgccaggcc
tacaaagaccatgagttctccagcggcgtgtctccggcacagaactgtctgatcggatgc
tgcaacaccaatctggaggaacccagaagtttccagagtcagactgatgatgatgactac
atgatggagaaacccctgggttacctgcctcttcaccatgagctggacagtgggctcgga
tggacggatggtagtttccaccagggggagctgtcgggggtggagacggaggaggggctc
gaggagcgccacggcaggtcaccatcgtctgagtcattcatctcgtctgaactgagcgac
tcaggtttttacagcgtcagcaccggcgagttcctgcgcttccagcgtctgctagagaaa
cgcatgcgccattacaacgcccgcatgcaccaccagggggagccgtgctctcgcgaacgg
cgcgacagccagataaaacaccccctagaggccatccccgaaacgctgacggtgcagcct
caaaacgtctgcacgcctgtcccgggatcacgtggtttgtcccgcgtgtcatccgtgcag
taccgtaaggtggagcggccatgtttgaacaggcacagctccagcagcggctcgctgttc
aatcccgcactgtactccacgtgcagtacgccctctggccagcgacggctgccgcctcat
ccgagctctgcgggaatgctgagaagaagcaggactctgcatcaccgccctgtgcccatg
gagtaccgcagacgggcgagtcacccggcctcgcccaactactgcagcggcacgctgcat
ccctgcggccacagagtcgacctgcccatgaatctccccgaggagccggcacttatgcac
accgtcagtcacccggcacaccctgttgtactccccacacagactctacacgctacacat
gcaatgagtcaaccttccctgatctctccagtcgacgagcactgctatatgcctccagaa
ctccatgataacagcaggatccgagcatccaccgaaccgcagctacagaagaggtttgtg
acccaacagacgcccaacaacaggttccacaccctaagtcacacgcccagtcaggacgcc
aacgacacctggcccaaacccgccagccgtgcaggctccggtggcggaggtggtctctac
agcaccttggagggccacacacccacctcttccatcaggaaaccatccagcgggaacctg
cgggccttgcgaaaccagatgctgcgggatagagcatcccgtctggcggatgagcgtagc
ggcatgagcacggacgaagagagtcacagcgaggtccgaatgggtcgctactggaaccgc
actgagcgccgtgaacacatgctgcagaaacagcgacagctgcaggccagaagcggcggt
ggcggcggcgtagctgcgtcaggtttggtgtatagcggcagagtcgtgggaggaactaac
ggagacagttgtaatacccttctcgagctgagccagaggaaactaagtcgcctgcggaac
cggaagctgctggacgactggaccaccgtagaggaactcctgacacacggaacgcgcctg
ggccccagcggagacacccggcagctgcctacgtcgttgctcaccgtcacaactgtatag
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