Sinocyclocheilus grahami (golden-line barbel): 107576950
Help
Entry
107576950 CDS
T04918
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107576950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sgh04054
]
107576950
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107576950
Pattern recognition receptors [BR:
sgh04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107576950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107576950
NCBI-ProteinID:
XP_016118557
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
ICANLDSVIVSTKNFTPVLQKVVPRPKKQYDIVEKRALDPFGDHLKAMMLMIHEFMPSTV
SLSLREMGTQEYEADVVELEKTGVKKENRLIAQCAXXXXLHLRQYNDALLINDTVRMVDA
FRGLDEFYNSRKTKLLDGTDLFLQGLFDENRVELKQLASNARYENPKLARLQCTLQEEFN
DENSRAILFSKTRRGTHCLFDWVKSNPELQRVNVKAGILTGAGTGANHMTQNEQKETIKH
FRKGILNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAMNSVYSVVAEEG
GREIRRELTNEYLESLTAKAIDQVQQMSPREFRLKLRIKTMKSMIPTMIKNKHVCTGVFH
RRHYRAGGQVVLEKSFEDWEPGRVISCRNCEKEWGMEIKFRRVVIVPCLKIKSFSLKTPG
GKSTPKQWKDVEFQVKEFDFLKDMSSHFPNLDLDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atctgtgccaatctggattcagtaattgtgtccaccaagaattttactccagtgctgcag
aaagtcgttcctagacccaaaaagcaatatgatattgttgaaaaaagagctctggatcca
tttggcgaccacttgaaggcaatgatgttgatgattcatgagtttatgccgtcaacggtg
agtctcagcctgcgagagatgggcacccaggaatatgaagctgatgtggtggaactagaa
aaaacaggtgtaaagaaagagaacagactgattgctcagtgcgcttnnnnnnnnnntttg
cacctgcggcaatacaacgacgctcttctcattaatgacaccgttcgcatggtggacgcg
ttccggggtctagacgagttctacaattcaaggaaaaccaaattgctggatggaacagat
ctctttctccagggactttttgatgagaaccgtgtggagcttaaacagctggcatcgaat
gcccgctacgaaaaccccaaactggcccggttgcaatgcacattgcaggaagagtttaat
gatgaaaactctcgcgctatcctcttctcaaagacccgcaggggcacccattgtctgttt
gactgggtgaaatccaaccctgagctgcagagggtcaacgtcaaagctggcattctcaca
ggagcgggtacaggtgcaaatcacatgacccagaatgaacaaaaggaaaccattaaacat
tttagaaaaggaatcctcaacctcctcatctccaccagtgtagctgaggaaggacttgat
attccagaatgcaacttagttgtacgttacgggctgttgaccaatgagatcgctcagcag
caggccagtgggcgggctcgagctatgaacagcgtctactcagtggtagccgaagaaggt
gggcgtgaaatacgcagggaactcaccaatgagtatctagaaagtctgactgcaaaagct
attgaccaagtgcagcaaatgagtcccagggagttcagactcaagctcagaataaaaaca
atgaagtcaatgatccctaccatgatcaaaaacaaacatgtctgtactggtgtgtttcat
aggaggcattatagagcaggtgggcaggtcgttctggagaagagctttgaagattgggag
cctggacgggttatcagctgcaggaactgtgaaaaggaatggggaatggagattaagttc
aggagggtggtaatagtcccctgcttgaaaataaagagcttttccttgaagactcctgga
ggcaaatccactcccaagcagtggaaggatgttgagttccaggtgaaagagttcgacttt
cttaaggacatgagcagccatttccctaacctagacttagacgactga
DBGET
integrated database retrieval system
