Sinocyclocheilus grahami (golden-line barbel): 107578195
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Entry
107578195 CDS
T04918
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015
mRNA surveillance pathway
sgh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107578195
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107578195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107578195
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107578195
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107578195
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107578195
U7-dependent histone pre-mRNA processing factors
107578195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
HEAT
PDS5
HEAT_MROH2B_C
GNC1_N
Adaptin_N
SCD
V-ATPase_H_C
Cohesin_HEAT
Rep_Org_C
Motif
Other DBs
NCBI-GeneID:
107578195
NCBI-ProteinID:
XP_016119662
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
VVELLNQAALISTEEKLIVLKQVQELIINKDPSLLDNFLDEIIAFQTDKSIEVRKFVIGF
IEEACKRDNELLLRLIANLNMLMRDESVNVVKKAILTLTQLYKVALQWLVRTKSVSDMQE
PCWDMVTQMKEDVLALLDSDNDGVRTHAIKFTESLIITLSPRTPDSDTPKKQEGDISLDK
IPKDHTYIRYDTLCEEGKLALEQLLKFMVHPAISSINLTTALGSLATLARQRPMFMSEVV
QAYETLHANLPPTLAKSQVSSVRKNLKLHLVSVLKHPSSVDFQGQISTLLLDLGMSQSEI
TRCTPATVQPRKRLHHEPYVEGKRIKMEATLVEDDDDKEEPAPVITPKPSSSAGTQSSID
LTAEFLLPLLNPENVANLVLFTKLVLEAPVITDSALEVIQRYCEDESRVYLGMSTLKELI
LKRPSRQYQYLNVLLNLSSHEKEKVRSTALSFIKRMYEKEHLKDCIEKFALTYMQFLVHP
NPPSLLFGAGEDT
NT seq
1480 nt
NT seq
+upstream
nt +downstream
nt
gtggtggaattgttaaaccaggcagcactcatctctacagaggaaaagcttattgttctc
aaacaggtgcaggagttgattatcaacaaggacccttcattgcttgataattttctggat
gaaatcatcgcatttcagactgataagtcaattgaggtgcgaaaatttgtcatcggattc
attgaggaggcatgtaaaagagacaatgagcttctgctgaggctgattgccaacctgaac
atgctgatgagagatgagagtgtgaatgtggtgaagaaggccattctgacactcactcag
ctatacaaagtggctttacagtggctggtgcgcactaagagtgtctcggacatgcaggag
ccatgctgggatatggtgacccagatgaaagaggatgttctggcattgctagactccgat
aacgacggagttcgcactcacgccatcaaattcactgagtccctcatcatcactctgtca
ccacggacacctgactctgatacgcccaagaaacaggagggagacatcagcctggacaaa
atcccaaaagaccacacgtatattcgatatgacaccttgtgtgaggagggaaagttggct
ctggagcagttgttaaagtttatggtgcaccctgccatctccagcattaatctcaccact
gcacttggatcactggctacgctggccagacagcggcccatgttcatgtctgaggtggtg
caggcatatgagacgctacatgctaacttgcccccgactctggctaagtctcaagtgagc
agtgtgcgcaagaacctgaagctgcatttggtttcggtgctgaagcaccccagcagcgtg
gacttccagggccagatttccactctgctgctggatcttggtatgtctcagagcgagatc
acccgctgcacgccagccacggtacagccccgtaagagactccaccatgagccctatgtc
gagggcaagaggatcaagatggaggccactctagtggaggatgatgatgataaggaagaa
ccagctccagtcatcaccccaaaaccatcctcctctgctggcacccaatcatccatcgat
ctcactgctgagttcctgttgcctctgctaaacccagagaatgtggccaacctggtgctt
ttcaccaagcttgtgttggaggctccggtcattacagactctgcactggaggtgattcaa
cgctactgtgaggacgagtcacgtgtttacctgggcatgtccacattaaaggagcttatc
ctaaaacgcccctccagacagtaccagtacctcaatgtccttctgaacctcagctctcac
gaaaaagaaaaggtgcggtccactgctctcagcttcatcaagcgcatgtatgagaaggaa
catctgaaggactgcattgagaagttcgctctcacctacatgcagtttctggtccaccca
aacccaccttctcttctgtttggagcaggagaggatacag
DBGET
integrated database retrieval system
